RNA–Protein interactions for RNA: YNL330C

RPD3, Transcript of Histone deacetylase, component of both the Rpd3S and Rpd3L complexes, yeastyeast

Gene RPD3, Length 1,302 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPD3YNL330C PFK2P16862 959 aaKnown RBP RIP-Chip data9.8□□□□□ -0.84not detected
RPD3YNL330C CBP3P21560 335 aa9.8□□□□□ -0.84
RPD3YNL330C DIT2P21595 489 aa9.8□□□□□ -0.84
RPD3YNL330C NPL4P33755 580 aa9.8□□□□□ -0.84
RPD3YNL330C MNR2P35724 969 aa9.8□□□□□ -0.84
RPD3YNL330C HAL5P38970 855 aaKnown RBP9.8□□□□□ -0.84
RPD3YNL330C ALD3P54114 506 aa9.8□□□□□ -0.84
RPD3YNL330C KAR5Q04746 504 aa9.8□□□□□ -0.84
RPD3YNL330C EST2Q06163 884 aa9.8□□□□□ -0.84
RPD3YNL330C SFI1Q12369 946 aa9.8□□□□□ -0.84
RPD3YNL330C HSP82P02829 709 aaKnown RBP9.79□□□□□ -0.84
RPD3YNL330C RPL22AP05749 121 aaKnown RBP9.79□□□□□ -0.84
RPD3YNL330C HOP09932 586 aa9.79□□□□□ -0.84
RPD3YNL330C NOC2P39744 710 aaKnown RBP9.79□□□□□ -0.84
RPD3YNL330C EPL1P43572 832 aa9.79□□□□□ -0.84
RPD3YNL330C HXK1P04806 485 aaKnown RBP9.78□□□□□ -0.84
RPD3YNL330C RER2P35196 286 aa9.78□□□□□ -0.84
RPD3YNL330C GEF1P37020 779 aa9.78□□□□□ -0.84
RPD3YNL330C FYV10P40492 516 aa9.78□□□□□ -0.84
RPD3YNL330C IRC8P47046 822 aa9.78□□□□□ -0.84
RPD3YNL330C GRE2Q12068 342 aaKnown RBP9.78□□□□□ -0.84
RPD3YNL330C SRP40P32583 406 aaPredicted RBP9.77□□□□□ -0.85
RPD3YNL330C PRP40P33203 583 aaKnown RBP9.77□□□□□ -0.85
RPD3YNL330C GLO3P38682 493 aaKnown RBP9.77□□□□□ -0.85
RPD3YNL330C RRP8P38961 392 aaKnown RBP9.77□□□□□ -0.85
RPD3YNL330C NUG1P40010 520 aaKnown RBP9.77□□□□□ -0.85
RPD3YNL330C IOC3P43596 787 aa9.77□□□□□ -0.85
RPD3YNL330C WAR1Q03631 944 aa9.77□□□□□ -0.85
RPD3YNL330C SRC1Q03707 834 aa9.77□□□□□ -0.85
RPD3YNL330C RGP1P16664 663 aa9.76□□□□□ -0.85
RPD3YNL330C NGR1P32831 672 aaKnown RBP9.76□□□□□ -0.85
RPD3YNL330C LTV1P34078 463 aa9.76□□□□□ -0.85
RPD3YNL330C JSN1P47135 1091 aaKnown RBP RIP-Chip data9.76□□□□□ -0.85not detected
RPD3YNL330C CTH1P47976 325 aa9.76□□□□□ -0.85
RPD3YNL330C BMH2P34730 273 aaKnown RBP9.75□□□□□ -0.85
RPD3YNL330C RPN10P38886 268 aaKnown RBP9.75□□□□□ -0.85
RPD3YNL330C VPS60Q03390 229 aa9.75□□□□□ -0.85
RPD3YNL330C PPM2Q08282 695 aa9.75□□□□□ -0.85
RPD3YNL330C CYB2P00175 591 aa9.74□□□□□ -0.85
RPD3YNL330C SSA2P10592 639 aaKnown RBP9.74□□□□□ -0.85
RPD3YNL330C HCA4P20448 770 aaKnown RBP9.74□□□□□ -0.85
RPD3YNL330C AKR1P39010 764 aa9.74□□□□□ -0.85
RPD3YNL330C RAT1Q02792 1006 aaKnown RBP9.74□□□□□ -0.85
RPD3YNL330C PET111P08468 800 aa9.73□□□□□ -0.85
RPD3YNL330C MCM4P30665 933 aaKnown RBP9.73□□□□□ -0.85
RPD3YNL330C ASF1P32447 279 aa9.73□□□□□ -0.85
RPD3YNL330C YJL181WP46987 611 aa9.73□□□□□ -0.85
RPD3YNL330C VPS75P53853 264 aa9.73□□□□□ -0.85
RPD3YNL330C YCG1Q06680 1035 aa9.73□□□□□ -0.85
RPD3YNL330C COQ1P18900 473 aa9.72□□□□□ -0.85
RPD3YNL330C DIB1Q06819 143 aaPredicted RBP9.72□□□□□ -0.85
RPD3YNL330C THI3Q07471 609 aa9.72□□□□□ -0.85
RPD3YNL330C DCS2Q12123 353 aa9.72□□□□□ -0.85
RPD3YNL330C SWI4P25302 1093 aaKnown RBP9.71□□□□□ -0.86
RPD3YNL330C GRX7P38068 203 aa9.71□□□□□ -0.86
RPD3YNL330C CUE3P53137 624 aaKnown RBP9.71□□□□□ -0.86
RPD3YNL330C HCR1Q05775 265 aaKnown RBP9.71□□□□□ -0.86
RPD3YNL330C COG4Q06096 861 aa9.71□□□□□ -0.86
RPD3YNL330C DPH6Q12429 685 aa9.71□□□□□ -0.86
RPD3YNL330C MRC1P25588 1096 aa9.7□□□□□ -0.86
RPD3YNL330C MGM1P32266 881 aa9.7□□□□□ -0.86
RPD3YNL330C PSY4P38193 441 aa9.7□□□□□ -0.86
RPD3YNL330C UFD2P54860 961 aa9.7□□□□□ -0.86
RPD3YNL330C RPS15Q01855 142 aaKnown RBP9.7□□□□□ -0.86
RPD3YNL330C INM2Q05533 292 aa9.7□□□□□ -0.86
RPD3YNL330C GET3Q12154 354 aaKnown RBP9.7□□□□□ -0.86
RPD3YNL330C BMH1P29311 267 aaKnown RBP9.69□□□□□ -0.86
RPD3YNL330C SAC6P32599 642 aaKnown RBP9.69□□□□□ -0.86
RPD3YNL330C SAP190P36123 1033 aa9.69□□□□□ -0.86
RPD3YNL330C ADE17P38009 592 aaKnown RBP9.69□□□□□ -0.86
RPD3YNL330C CIN4P39110 191 aa9.69□□□□□ -0.86
RPD3YNL330C GFD1Q04839 188 aaKnown RBP9.69□□□□□ -0.86
RPD3YNL330C TFC6Q06339 672 aa9.69□□□□□ -0.86
RPD3YNL330C ARP8Q12386 881 aaKnown RBP RIP-Chip data9.69□□□□□ -0.86not detected
RPD3YNL330C CDC6P09119 513 aa9.68□□□□□ -0.86
RPD3YNL330C MCM3P24279 971 aaKnown RBP9.68□□□□□ -0.86
RPD3YNL330C URA1P28272 314 aaPredicted RBP9.68□□□□□ -0.86
RPD3YNL330C MAL31P38156 614 aa9.68□□□□□ -0.86
RPD3YNL330C YIR042CP40586 236 aa9.68□□□□□ -0.86
RPD3YNL330C OSW7P43611 510 aa9.68□□□□□ -0.86
RPD3YNL330C GDE1Q02979 1223 aa9.68□□□□□ -0.86
RPD3YNL330C CSC1Q06538 782 aa9.68□□□□□ -0.86
RPD3YNL330C CTI6Q08923 506 aa9.68□□□□□ -0.86
RPD3YNL330C NBL1Q3E7Y6 73 aa9.68□□□□□ -0.86
RPD3YNL330C FAS2P19097 1887 aaKnown RBP9.68□□□□□ -0.86
RPD3YNL330C CHO2P05374 869 aaKnown RBP9.67□□□□□ -0.86
RPD3YNL330C PHO13P19881 312 aa9.67□□□□□ -0.86
RPD3YNL330C CDC15P27636 974 aa9.67□□□□□ -0.86
RPD3YNL330C BOI1P38041 980 aaKnown RBP9.67□□□□□ -0.86
RPD3YNL330C ICP55P40051 511 aa9.67□□□□□ -0.86
RPD3YNL330C YIL055CP40523 627 aaKnown RBP9.67□□□□□ -0.86
RPD3YNL330C ALG2P43636 503 aa9.67□□□□□ -0.86
RPD3YNL330C SYF1Q04048 859 aaPredicted RBP9.67□□□□□ -0.86
RPD3YNL330C TMA16Q08687 178 aa9.67□□□□□ -0.86
RPD3YNL330C BUG1Q12191 341 aa9.67□□□□□ -0.86
RPD3YNL330C PET123P17558 318 aa9.66□□□□□ -0.86
RPD3YNL330C ANP1P32629 500 aa9.66□□□□□ -0.86
RPD3YNL330C MGA2P40578 1113 aa9.66□□□□□ -0.86
RPD3YNL330C RPN11P43588 306 aaKnown RBP9.66□□□□□ -0.86
RPD3YNL330C STR2P47164 639 aa9.66□□□□□ -0.86
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms