RNA–Protein interactions for RNA: YNL317W

PFS2, Transcript of Integral subunit of the pre-mRNA CPF complex, yeastyeast

Gene PFS2, Length 1,398 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PFS2YNL317W ALF1P53904 254 aa8.71□□□□□ -1.02
PFS2YNL317W YMR074CQ04773 145 aa8.71□□□□□ -1.02
PFS2YNL317W URB1P34241 1764 aaKnown RBP8.7□□□□□ -1.02
PFS2YNL317W NFU1P32860 256 aa8.7□□□□□ -1.02
PFS2YNL317W HUL4P40985 892 aa8.7□□□□□ -1.02
PFS2YNL317W PRP43P53131 767 aaKnown RBP8.7□□□□□ -1.02
PFS2YNL317W PXR1P53335 271 aaPredicted RBP8.7□□□□□ -1.02
PFS2YNL317W IMH1Q06704 911 aaKnown RBP8.7□□□□□ -1.02
PFS2YNL317W YOL057WQ08225 711 aa8.7□□□□□ -1.02
PFS2YNL317W PSY4P38193 441 aa8.69□□□□□ -1.02
PFS2YNL317W MRPS35P53292 345 aa8.69□□□□□ -1.02
PFS2YNL317W YDR338CQ05497 695 aa8.69□□□□□ -1.02
PFS2YNL317W NSE3Q05541 303 aa8.69□□□□□ -1.02
PFS2YNL317W STE23Q06010 1027 aa8.69□□□□□ -1.02
PFS2YNL317W SFH1Q06168 426 aa8.69□□□□□ -1.02
PFS2YNL317W OSH2Q12451 1283 aa8.69□□□□□ -1.02
PFS2YNL317W SMC6Q12749 1114 aa8.69□□□□□ -1.02
PFS2YNL317W PHO13P19881 312 aa8.68□□□□□ -1.02
PFS2YNL317W SWC3P31376 625 aa8.68□□□□□ -1.02
PFS2YNL317W ECM32P32644 1121 aaKnown RBP8.68□□□□□ -1.02
PFS2YNL317W STO1P34160 861 aaKnown RBP8.68□□□□□ -1.02
PFS2YNL317W HEL1P36113 551 aa8.68□□□□□ -1.02
PFS2YNL317W HOS4P40480 1083 aa8.68□□□□□ -1.02
PFS2YNL317W MLC1P53141 149 aa8.68□□□□□ -1.02
PFS2YNL317W VTC3Q02725 835 aa8.68□□□□□ -1.02
PFS2YNL317W EIS1Q05050 843 aaKnown RBP8.68□□□□□ -1.02
PFS2YNL317W VPS38Q05919 439 aa8.68□□□□□ -1.02
PFS2YNL317W AOS1Q06624 347 aa8.68□□□□□ -1.02
PFS2YNL317W PDC1P06169 563 aaKnown RBP8.67□□□□□ -1.02
PFS2YNL317W PRP16P15938 1071 aaPredicted RBP8.67□□□□□ -1.02
PFS2YNL317W MRPS28P21771 286 aa8.67□□□□□ -1.02
PFS2YNL317W RRP43P25359 394 aaPredicted RBP8.67□□□□□ -1.02
PFS2YNL317W PRP45P28004 379 aaPredicted RBP8.67□□□□□ -1.02
PFS2YNL317W YSW1P38280 609 aa8.67□□□□□ -1.02
PFS2YNL317W VID28P40547 921 aa8.67□□□□□ -1.02
PFS2YNL317W YJR079WP47126 109 aa8.67□□□□□ -1.02
PFS2YNL317W RRP15Q06511 250 aaPredicted RBP8.67□□□□□ -1.02
PFS2YNL317W YOR223WQ12015 292 aa8.67□□□□□ -1.02
PFS2YNL317W UGA3P26370 528 aa8.66□□□□□ -1.02
PFS2YNL317W CDC60P26637 1090 aaKnown RBP8.66□□□□□ -1.02
PFS2YNL317W KTR1P27810 393 aaKnown RBP8.66□□□□□ -1.02
PFS2YNL317W BUD16P39988 312 aa8.66□□□□□ -1.02
PFS2YNL317W SEC9P40357 651 aa8.66□□□□□ -1.02
PFS2YNL317W SEC26P41810 973 aaKnown RBP8.66□□□□□ -1.02
PFS2YNL317W YKE2P52553 114 aa8.66□□□□□ -1.02
PFS2YNL317W SPO19Q03029 223 aa8.66□□□□□ -1.02
PFS2YNL317W YDR306CQ06640 478 aa8.66□□□□□ -1.02
PFS2YNL317W SDH5Q08230 162 aa8.66□□□□□ -1.02
PFS2YNL317W TMA16Q08687 178 aa8.66□□□□□ -1.02
PFS2YNL317W BUD6P41697 788 aa8.65□□□□□ -1.02
PFS2YNL317W ERV41Q04651 352 aa8.65□□□□□ -1.02
PFS2YNL317W LCB5Q06147 687 aaKnown RBP8.65□□□□□ -1.02
PFS2YNL317W YOL098CQ12496 1037 aa8.65□□□□□ -1.02
PFS2YNL317W TY4A-HQ6Q5P6 413 aa8.65□□□□□ -1.02
PFS2YNL317W MATALPHA2P0CY08 210 aa8.64□□□□□ -1.03
PFS2YNL317W HMLALPHA2P0CY09 210 aa8.64□□□□□ -1.03
PFS2YNL317W PRE10P21242 288 aaKnown RBP RIP-Chip data8.64□□□□□ -1.03not detected
PFS2YNL317W DPH5P32469 300 aaPredicted RBP8.64□□□□□ -1.03
PFS2YNL317W YME2P32843 850 aa8.64□□□□□ -1.03
PFS2YNL317W PXL1P36166 706 aa8.64□□□□□ -1.03
PFS2YNL317W OLA1P38219 394 aaKnown RBP8.64□□□□□ -1.03
PFS2YNL317W SSF1P38789 453 aaPredicted RBP8.64□□□□□ -1.03
PFS2YNL317W CCC2P38995 1004 aa8.64□□□□□ -1.03
PFS2YNL317W STM1P39015 273 aaKnown RBP8.64□□□□□ -1.03
PFS2YNL317W MIC19P43594 170 aa8.64□□□□□ -1.03
PFS2YNL317W TRS85P46944 698 aa8.64□□□□□ -1.03
PFS2YNL317W ILM1P47155 203 aa8.64□□□□□ -1.03
PFS2YNL317W HOT1Q03213 719 aa8.64□□□□□ -1.03
PFS2YNL317W RAD1P06777 1100 aa8.63□□□□□ -1.03
PFS2YNL317W PGI1P12709 554 aaKnown RBP8.63□□□□□ -1.03
PFS2YNL317W PMR1P13586 950 aa8.63□□□□□ -1.03
PFS2YNL317W RAD4P14736 754 aa8.63□□□□□ -1.03
PFS2YNL317W DAL7P21826 554 aa8.63□□□□□ -1.03
PFS2YNL317W MGA2P40578 1113 aa8.63□□□□□ -1.03
PFS2YNL317W BOP3P53958 396 aa8.63□□□□□ -1.03
PFS2YNL317W CMS1Q07897 291 aaKnown RBP8.63□□□□□ -1.03
PFS2YNL317W FKS3Q04952 1785 aa8.63□□□□□ -1.03
PFS2YNL317W SEC23P15303 768 aaKnown RBP8.62□□□□□ -1.03
PFS2YNL317W PRP5P21372 849 aaPredicted RBP8.62□□□□□ -1.03
PFS2YNL317W PUP2P32379 260 aa8.62□□□□□ -1.03
PFS2YNL317W CNS1P33313 385 aa8.62□□□□□ -1.03
PFS2YNL317W TPS3P38426 1054 aaKnown RBP8.62□□□□□ -1.03
PFS2YNL317W CIC1P38779 376 aaKnown RBP8.62□□□□□ -1.03
PFS2YNL317W PXA1P41909 870 aa8.62□□□□□ -1.03
PFS2YNL317W YJR142WP47173 342 aa8.62□□□□□ -1.03
PFS2YNL317W ALO1P54783 526 aaKnown RBP8.62□□□□□ -1.03
PFS2YNL317W DNM1P54861 757 aa8.62□□□□□ -1.03
PFS2YNL317W CTF4Q01454 927 aa8.62□□□□□ -1.03
PFS2YNL317W HCR1Q05775 265 aaKnown RBP8.62□□□□□ -1.03
PFS2YNL317W VAC14Q06708 880 aa8.62□□□□□ -1.03
PFS2YNL317W NUR1Q12066 484 aa8.62□□□□□ -1.03
PFS2YNL317W RPL22AP05749 121 aaKnown RBP8.61□□□□□ -1.03
PFS2YNL317W KRS1P15180 591 aaKnown RBP8.61□□□□□ -1.03
PFS2YNL317W KAR3P17119 729 aa8.61□□□□□ -1.03
PFS2YNL317W GAL11P19659 1081 aa8.61□□□□□ -1.03
PFS2YNL317W FBP26P32604 452 aa8.61□□□□□ -1.03
PFS2YNL317W ISW1P38144 1129 aa8.61□□□□□ -1.03
PFS2YNL317W ALD2P47771 506 aa8.61□□□□□ -1.03
PFS2YNL317W YLR407WQ06070 228 aa8.61□□□□□ -1.03
PFS2YNL317W NOP6Q07623 225 aaKnown RBP8.61□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 32.8 ms