RNA–Protein interactions for RNA: YNL049C

SFB2, Transcript of Component of the Sec23p-Sfb2p heterodimer of the COPII vesicle coat, yeastyeast

Gene SFB2, Length 2,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFB2YNL049C ISR1Q06098 443 aaKnown RBP2.45□□□□□ -2.02
SFB2YNL049C TCB1Q12466 1186 aa2.45□□□□□ -2.02
SFB2YNL049C MIP1P15801 1254 aa2.45□□□□□ -2.02
SFB2YNL049C YKL222CP35995 705 aa2.45□□□□□ -2.02
SFB2YNL049C PAM1P37304 830 aaKnown RBP2.45□□□□□ -2.02
SFB2YNL049C ERT1P38140 529 aa2.45□□□□□ -2.02
SFB2YNL049C PAF1P38351 445 aa2.45□□□□□ -2.02
SFB2YNL049C YHL050CP38721 697 aa2.45□□□□□ -2.02
SFB2YNL049C YHR219WP38900 624 aa2.45□□□□□ -2.02
SFB2YNL049C SAP155P43612 1002 aa2.45□□□□□ -2.02
SFB2YNL049C SNU71P53207 620 aaKnown RBP2.45□□□□□ -2.02
SFB2YNL049C PUN1Q06991 263 aa2.45□□□□□ -2.02
SFB2YNL049C GAS4Q08271 471 aa2.45□□□□□ -2.02
SFB2YNL049C MSC6Q08818 692 aaKnown RBP2.45□□□□□ -2.02
SFB2YNL049C YKR075CP36155 307 aa2.44□□□□□ -2.02
SFB2YNL049C TOS1P38288 455 aa2.44□□□□□ -2.02
SFB2YNL049C RPN11P43588 306 aaKnown RBP2.44□□□□□ -2.02
SFB2YNL049C NOP7P53261 605 aaKnown RBP2.44□□□□□ -2.02
SFB2YNL049C ORC1P54784 914 aaPredicted RBP2.44□□□□□ -2.02
SFB2YNL049C HDA3Q06623 655 aa2.44□□□□□ -2.02
SFB2YNL049C SLM3Q12093 417 aa2.44□□□□□ -2.02
SFB2YNL049C WHI5Q12416 295 aa2.44□□□□□ -2.02
SFB2YNL049C SRS2P12954 1174 aa2.44□□□□□ -2.02
SFB2YNL049C SEC20P28791 383 aa2.44□□□□□ -2.02
SFB2YNL049C SUV3P32580 737 aa2.44□□□□□ -2.02
SFB2YNL049C AIM9P40053 627 aaKnown RBP2.44□□□□□ -2.02
SFB2YNL049C RRP15Q06511 250 aaPredicted RBP2.44□□□□□ -2.02
SFB2YNL049C YDL176WQ12027 708 aa2.44□□□□□ -2.02
SFB2YNL049C HKR1P41809 1802 aa2.44□□□□□ -2.02
SFB2YNL049C ATE1P16639 503 aa2.43□□□□□ -2.02
SFB2YNL049C CST6P40535 587 aa2.43□□□□□ -2.02
SFB2YNL049C ATG1P53104 897 aa2.43□□□□□ -2.02
SFB2YNL049C ATG20Q07528 640 aa2.43□□□□□ -2.02
SFB2YNL049C VAN1P23642 535 aa2.43□□□□□ -2.02
SFB2YNL049C NTH2P35172 780 aa2.43□□□□□ -2.02
SFB2YNL049C BUG1Q12191 341 aa2.43□□□□□ -2.02
SFB2YNL049C FUR4P05316 633 aaKnown RBP2.42□□□□□ -2.02
SFB2YNL049C BOI1P38041 980 aaKnown RBP2.42□□□□□ -2.02
SFB2YNL049C GLO3P38682 493 aaKnown RBP2.42□□□□□ -2.02
SFB2YNL049C QDR1P40475 563 aa2.42□□□□□ -2.02
SFB2YNL049C FRT1Q99332 602 aa2.42□□□□□ -2.02
SFB2YNL049C KIP2P28743 706 aa2.42□□□□□ -2.02
SFB2YNL049C ESL2P36168 1195 aa2.42□□□□□ -2.02
SFB2YNL049C PPX1P38698 397 aa2.42□□□□□ -2.02
SFB2YNL049C ETP1P38748 585 aaKnown RBP2.42□□□□□ -2.02
SFB2YNL049C YFL034WP43564 1073 aa2.42□□□□□ -2.02
SFB2YNL049C MTR4P47047 1073 aaKnown RBP2.42□□□□□ -2.02
SFB2YNL049C POL32P47110 350 aa2.42□□□□□ -2.02
SFB2YNL049C MDG1P53885 366 aa2.42□□□□□ -2.02
SFB2YNL049C NUT2Q06213 157 aa2.42□□□□□ -2.02
SFB2YNL049C TRS33Q99394 268 aa2.42□□□□□ -2.02
SFB2YNL049C GSC2P40989 1895 aa2.41□□□□□ -2.02
SFB2YNL049C LYS2P07702 1392 aa2.41□□□□□ -2.02
SFB2YNL049C CYT1P07143 309 aa2.41□□□□□ -2.02
SFB2YNL049C RPS6AP0CX37 236 aaKnown RBP2.41□□□□□ -2.02
SFB2YNL049C RPS6BP0CX38 236 aaPredicted RBP2.41□□□□□ -2.02
SFB2YNL049C GRX1P25373 110 aaKnown RBP2.41□□□□□ -2.02
SFB2YNL049C PRP45P28004 379 aaPredicted RBP2.41□□□□□ -2.02
SFB2YNL049C RRT14P40470 206 aa2.41□□□□□ -2.02
SFB2YNL049C EMW1P42842 904 aaKnown RBP2.41□□□□□ -2.02
SFB2YNL049C BDP1P46678 594 aa2.41□□□□□ -2.02
SFB2YNL049C DUS1P53759 423 aaKnown RBP2.41□□□□□ -2.02
SFB2YNL049C YML133CQ03099 1374 aa2.41□□□□□ -2.02
SFB2YNL049C CDC4P07834 779 aa2.41□□□□□ -2.02
SFB2YNL049C SWI5P08153 709 aa2.41□□□□□ -2.02
SFB2YNL049C ASF1P32447 279 aa2.41□□□□□ -2.02
SFB2YNL049C DIB1Q06819 143 aaPredicted RBP2.41□□□□□ -2.02
SFB2YNL049C NYV1Q12255 253 aa2.41□□□□□ -2.02
SFB2YNL049C LSO1Q3E827 93 aa2.41□□□□□ -2.02
SFB2YNL049C TAF5P38129 798 aa2.4□□□□□ -2.02
SFB2YNL049C YER156CP40093 338 aaKnown RBP2.4□□□□□ -2.02
SFB2YNL049C ACF4P47129 309 aa2.4□□□□□ -2.02
SFB2YNL049C EAR1Q03212 550 aa2.4□□□□□ -2.02
SFB2YNL049C FAS2P19097 1887 aaKnown RBP2.4□□□□□ -2.03
SFB2YNL049C SPT2P06843 333 aaPredicted RBP2.4□□□□□ -2.03
SFB2YNL049C UTR2P32623 467 aa2.4□□□□□ -2.03
SFB2YNL049C NGR1P32831 672 aaKnown RBP2.4□□□□□ -2.03
SFB2YNL049C MAC1P35192 417 aa2.4□□□□□ -2.03
SFB2YNL049C PFF1P38244 976 aa2.4□□□□□ -2.03
SFB2YNL049C CTF4Q01454 927 aa2.4□□□□□ -2.03
SFB2YNL049C ISU1Q03020 165 aa2.4□□□□□ -2.03
SFB2YNL049C LCB5Q06147 687 aaKnown RBP2.4□□□□□ -2.03
SFB2YNL049C SSK22P25390 1331 aaPredicted RBP2.4□□□□□ -2.03
SFB2YNL049C MET4P32389 672 aa2.39□□□□□ -2.03
SFB2YNL049C FBP26P32604 452 aa2.39□□□□□ -2.03
SFB2YNL049C MKS1P34072 584 aa2.39□□□□□ -2.03
SFB2YNL049C YBR197CP38306 217 aa2.39□□□□□ -2.03
SFB2YNL049C MLP1Q02455 1875 aaKnown RBP2.39□□□□□ -2.03
SFB2YNL049C SYH1Q02875 849 aaKnown RBP2.39□□□□□ -2.03
SFB2YNL049C FRK1Q03002 865 aaPredicted RBP2.39□□□□□ -2.03
SFB2YNL049C CAB1Q04430 367 aa2.39□□□□□ -2.03
SFB2YNL049C STB3Q12427 513 aa2.39□□□□□ -2.03
SFB2YNL049C ISC10P32645 267 aa2.39□□□□□ -2.03
SFB2YNL049C SEC8P32855 1065 aa2.39□□□□□ -2.03
SFB2YNL049C LYS4P49367 693 aaPredicted RBP2.39□□□□□ -2.03
SFB2YNL049C CWH41P53008 833 aa2.39□□□□□ -2.03
SFB2YNL049C OYE2Q03558 400 aaKnown RBP2.39□□□□□ -2.03
SFB2YNL049C GPI13Q07830 1017 aa2.39□□□□□ -2.03
SFB2YNL049C DAT1P13483 248 aaKnown RBP2.38□□□□□ -2.03
SFB2YNL049C RPB10P22139 70 aa2.38□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 61 ms