RNA–Protein interactions for RNA: YMR214W

SCJ1, Transcript of One of several homologs of bacterial chaperone DnaJ, yeastyeast

Gene SCJ1, Length 1,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCJ1YMR214W SNF3P10870 884 aa18.32■□□□□ 0.52
SCJ1YMR214W FPR3P38911 411 aaKnown RBP18.32■□□□□ 0.52
SCJ1YMR214W YOR131CQ12486 218 aa18.32■□□□□ 0.52
SCJ1YMR214W DLD1P32891 587 aa18.31■□□□□ 0.52
SCJ1YMR214W FIR1P40020 876 aa18.31■□□□□ 0.52
SCJ1YMR214W NOP2P40991 618 aaKnown RBP18.3■□□□□ 0.52
SCJ1YMR214W PCL8Q08966 492 aa18.3■□□□□ 0.52
SCJ1YMR214W SEC18P18759 758 aaKnown RBP18.29■□□□□ 0.52
SCJ1YMR214W TUB2P02557 457 aaKnown RBP18.28■□□□□ 0.52
SCJ1YMR214W WHI3P34761 661 aaKnown RBP18.28■□□□□ 0.52
SCJ1YMR214W ICL2Q12031 575 aa18.28■□□□□ 0.52
SCJ1YMR214W GLO3P38682 493 aaKnown RBP18.27■□□□□ 0.52
SCJ1YMR214W SLA1P32790 1244 aa18.26■□□□□ 0.51
SCJ1YMR214W YFL040WP43562 540 aa18.26■□□□□ 0.51
SCJ1YMR214W SNU71P53207 620 aaKnown RBP18.26■□□□□ 0.51
SCJ1YMR214W GYP5Q12344 894 aa18.26■□□□□ 0.51
SCJ1YMR214W GCD7P32502 381 aaPredicted RBP18.25■□□□□ 0.51
SCJ1YMR214W PIP2P52960 996 aa18.25■□□□□ 0.51
SCJ1YMR214W ECM30Q06673 1274 aa18.25■□□□□ 0.51
SCJ1YMR214W SUB2Q07478 446 aaKnown RBP18.24■□□□□ 0.51
SCJ1YMR214W MSH4P40965 878 aaPredicted RBP18.23■□□□□ 0.51
SCJ1YMR214W YDL124WQ07551 312 aaKnown RBP18.23■□□□□ 0.51
SCJ1YMR214W PIF1P07271 859 aa18.22■□□□□ 0.51
SCJ1YMR214W YPL034WQ03083 165 aa18.22■□□□□ 0.51
SCJ1YMR214W KIN1P13185 1064 aa18.21■□□□□ 0.51
SCJ1YMR214W UIP5P36137 443 aa18.21■□□□□ 0.51
SCJ1YMR214W BOI1P38041 980 aaKnown RBP18.2■□□□□ 0.5
SCJ1YMR214W YJL007CP47080 104 aa18.2■□□□□ 0.5
SCJ1YMR214W NSG2P53898 299 aa18.2■□□□□ 0.5
SCJ1YMR214W MAM3Q12296 706 aa18.2■□□□□ 0.5
SCJ1YMR214W NMD2P38798 1089 aaKnown RBP18.19■□□□□ 0.5
SCJ1YMR214W MET7Q08645 548 aa18.19■□□□□ 0.5
SCJ1YMR214W HAL5P38970 855 aaKnown RBP18.18■□□□□ 0.5
SCJ1YMR214W YNL193WP53870 558 aa18.18■□□□□ 0.5
SCJ1YMR214W SUT2Q12286 268 aa18.17■□□□□ 0.5
SCJ1YMR214W MXR1P40029 184 aa18.16■□□□□ 0.5
SCJ1YMR214W YJR107WP47145 328 aa18.16■□□□□ 0.5
SCJ1YMR214W HGH1P48362 394 aaKnown RBP18.16■□□□□ 0.5
SCJ1YMR214W BRE5P53741 515 aaKnown RBP18.16■□□□□ 0.5
SCJ1YMR214W FMP30Q02883 468 aa18.16■□□□□ 0.5
SCJ1YMR214W DIT2P21595 489 aa18.15■□□□□ 0.5
SCJ1YMR214W SSF1P38789 453 aaPredicted RBP18.15■□□□□ 0.5
SCJ1YMR214W YMR084WA2P2R3 262 aa18.14■□□□□ 0.49
SCJ1YMR214W AI2P03876 854 aa18.14■□□□□ 0.49
SCJ1YMR214W PRE10P21242 288 aaKnown RBP RIP-Chip data18.14■□□□□ 0.49not detected
SCJ1YMR214W CST26P38226 397 aa18.14■□□□□ 0.49
SCJ1YMR214W KEL3Q08979 651 aaPredicted RBP18.14■□□□□ 0.49
SCJ1YMR214W VMA2P16140 517 aaKnown RBP18.13■□□□□ 0.49
SCJ1YMR214W PKC1P24583 1151 aa18.13■□□□□ 0.49
SCJ1YMR214W PER1P25625 357 aa18.13■□□□□ 0.49
SCJ1YMR214W EUG1P32474 517 aa18.13■□□□□ 0.49
SCJ1YMR214W LAP2Q10740 671 aa18.13■□□□□ 0.49
SCJ1YMR214W ERG12P07277 443 aa18.12■□□□□ 0.49
SCJ1YMR214W AIM21P40563 679 aa18.12■□□□□ 0.49
SCJ1YMR214W RPN7Q06103 429 aaKnown RBP18.12■□□□□ 0.49
SCJ1YMR214W AHC1Q12433 566 aa18.12■□□□□ 0.49
SCJ1YMR214W CYB2P00175 591 aa18.11■□□□□ 0.49
SCJ1YMR214W UBX5Q06682 500 aa18.11■□□□□ 0.49
SCJ1YMR214W MDM20Q12387 796 aaKnown RBP18.11■□□□□ 0.49
SCJ1YMR214W MPH3P0CE00 602 aa18.09■□□□□ 0.49
SCJ1YMR214W AVT3P36062 692 aa18.09■□□□□ 0.49
SCJ1YMR214W KRS1P15180 591 aaKnown RBP18.08■□□□□ 0.48
SCJ1YMR214W YAF9P53930 226 aa18.08■□□□□ 0.48
SCJ1YMR214W SPB4P25808 606 aaPredicted RBP18.07■□□□□ 0.48
SCJ1YMR214W MSC7P38694 644 aa18.06■□□□□ 0.48
SCJ1YMR214W BDP1P46678 594 aa18.06■□□□□ 0.48
SCJ1YMR214W PRY3P47033 881 aa18.06■□□□□ 0.48
SCJ1YMR214W NKP2Q06162 153 aa18.06■□□□□ 0.48
SCJ1YMR214W AFG3P39925 761 aa18.05■□□□□ 0.48
SCJ1YMR214W YML037CQ03703 340 aa18.05■□□□□ 0.48
SCJ1YMR214W GRX7P38068 203 aa18.04■□□□□ 0.48
SCJ1YMR214W GPB2P39717 880 aa18.03■□□□□ 0.48
SCJ1YMR214W NCB2Q92317 146 aa18.03■□□□□ 0.48
SCJ1YMR214W RGT1P32862 1170 aa18.02■□□□□ 0.48
SCJ1YMR214W KTR3P38130 404 aaPredicted RBP18.02■□□□□ 0.48
SCJ1YMR214W RFC1P38630 861 aaKnown RBP18.02■□□□□ 0.48
SCJ1YMR214W TIF4631P39935 952 aaKnown RBP18.02■□□□□ 0.48
SCJ1YMR214W RPC31P17890 251 aa18■□□□□ 0.47
SCJ1YMR214W KTR2P33550 425 aa18■□□□□ 0.47
SCJ1YMR214W RMD1Q03441 430 aa18■□□□□ 0.47
SCJ1YMR214W HIP1P06775 603 aa17.99■□□□□ 0.47
SCJ1YMR214W CDC16P09798 840 aa17.99■□□□□ 0.47
SCJ1YMR214W PRE8P23639 250 aa17.99■□□□□ 0.47
SCJ1YMR214W KSP1P38691 1029 aaKnown RBP17.99■□□□□ 0.47
SCJ1YMR214W DUS4Q06063 367 aa17.99■□□□□ 0.47
SCJ1YMR214W YPL260WQ08977 551 aa17.99■□□□□ 0.47
SCJ1YMR214W PDR18P53756 1333 aa17.98■□□□□ 0.47
SCJ1YMR214W NOT3P06102 836 aaKnown RBP17.98■□□□□ 0.47
SCJ1YMR214W ECM16Q04217 1267 aaKnown RBP17.98■□□□□ 0.47
SCJ1YMR214W SRP40P32583 406 aaPredicted RBP17.97■□□□□ 0.47
SCJ1YMR214W YKR018CP36114 725 aa17.97■□□□□ 0.47
SCJ1YMR214W ECM21P38167 1117 aaKnown RBP17.97■□□□□ 0.47
SCJ1YMR214W BUL2Q03758 920 aaKnown RBP17.97■□□□□ 0.47
SCJ1YMR214W RAD50P12753 1312 aa17.97■□□□□ 0.47
SCJ1YMR214W TUS1Q06412 1307 aa17.97■□□□□ 0.47
SCJ1YMR214W TOM71P38825 639 aaKnown RBP17.96■□□□□ 0.47
SCJ1YMR214W CDC19P00549 500 aaKnown RBP17.95■□□□□ 0.46
SCJ1YMR214W YGL242CP53066 181 aa17.95■□□□□ 0.46
SCJ1YMR214W MIP1P15801 1254 aa17.94■□□□□ 0.46
SCJ1YMR214W SRM1P21827 482 aa17.94■□□□□ 0.46
Retrieved 100 of 5,963 RNA–protein pairs in 57.5 ms