RNA–Protein interactions for RNA: YMR185W

RTP1, Transcript of Protein required for the nuclear import and biogenesis of RNA pol II, yeastyeast

Gene RTP1, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTP1YMR185W YFL034WP43564 1073 aa2.31□□□□□ -2.04
RTP1YMR185W HGH1P48362 394 aaKnown RBP2.31□□□□□ -2.04
RTP1YMR185W CDC45Q08032 650 aa2.31□□□□□ -2.04
RTP1YMR185W SWI5P08153 709 aa2.3□□□□□ -2.04
RTP1YMR185W IME2P32581 645 aa2.3□□□□□ -2.04
RTP1YMR185W MAC1P35192 417 aa2.3□□□□□ -2.04
RTP1YMR185W PDS5Q04264 1277 aa2.3□□□□□ -2.04
RTP1YMR185W UTP13Q05946 817 aaKnown RBP2.3□□□□□ -2.04
RTP1YMR185W PSH1Q12161 406 aa2.3□□□□□ -2.04
RTP1YMR185W RPS6AP0CX37 236 aaKnown RBP2.3□□□□□ -2.04
RTP1YMR185W RPS6BP0CX38 236 aaPredicted RBP2.3□□□□□ -2.04
RTP1YMR185W PDR11P40550 1411 aa2.3□□□□□ -2.04
RTP1YMR185W TRM3Q07527 1436 aa2.3□□□□□ -2.04
RTP1YMR185W BNR1P40450 1375 aa2.3□□□□□ -2.04
RTP1YMR185W PDI1P17967 522 aaKnown RBP2.29□□□□□ -2.04
RTP1YMR185W ESL2P36168 1195 aa2.29□□□□□ -2.04
RTP1YMR185W SHM1P37292 490 aaPredicted RBP2.29□□□□□ -2.04
RTP1YMR185W OPY1P38271 328 aa2.29□□□□□ -2.04
RTP1YMR185W VPS27P40343 622 aaKnown RBP2.29□□□□□ -2.04
RTP1YMR185W APL6P46682 809 aa2.29□□□□□ -2.04
RTP1YMR185W DRS2P39524 1355 aa2.29□□□□□ -2.04
RTP1YMR185W CFT1Q06632 1357 aaKnown RBP2.29□□□□□ -2.04
RTP1YMR185W CAB3P36076 571 aa2.29□□□□□ -2.04
RTP1YMR185W YRF1-4O13559 1382 aa2.29□□□□□ -2.04
RTP1YMR185W YML133CQ03099 1374 aa2.29□□□□□ -2.04
RTP1YMR185W YLL067CQ07888 1374 aa2.29□□□□□ -2.04
RTP1YMR185W YLL066CQ99208 1374 aa2.29□□□□□ -2.04
RTP1YMR185W RPP1AP05318 106 aaPredicted RBP2.28□□□□□ -2.04
RTP1YMR185W NTH2P35172 780 aa2.28□□□□□ -2.04
RTP1YMR185W EBP2P36049 427 aaKnown RBP2.28□□□□□ -2.04
RTP1YMR185W MTO1P53070 669 aa2.28□□□□□ -2.04
RTP1YMR185W PDC5P16467 563 aaKnown RBP2.28□□□□□ -2.04
RTP1YMR185W CLC1P17891 233 aa2.28□□□□□ -2.04
RTP1YMR185W MCX1P38323 520 aaPredicted RBP2.28□□□□□ -2.04
RTP1YMR185W SLN1P39928 1220 aaPredicted RBP2.28□□□□□ -2.04
RTP1YMR185W MCA1Q08601 432 aa2.28□□□□□ -2.04
RTP1YMR185W PRY1P47032 299 aa2.28□□□□□ -2.05
RTP1YMR185W BCK1Q01389 1478 aa2.27□□□□□ -2.05
RTP1YMR185W CYT1P07143 309 aa2.27□□□□□ -2.05
RTP1YMR185W RPC31P17890 251 aa2.27□□□□□ -2.05
RTP1YMR185W RTG2P32608 588 aaKnown RBP2.27□□□□□ -2.05
RTP1YMR185W ALG14P38242 237 aa2.27□□□□□ -2.05
RTP1YMR185W TY1A-DR2Q03964 440 aaKnown RBP2.27□□□□□ -2.05
RTP1YMR185W Q0182Q9ZZW1 134 aa2.27□□□□□ -2.05
RTP1YMR185W MLF3P32047 452 aa2.27□□□□□ -2.05
RTP1YMR185W KNS1P32350 737 aaPredicted RBP2.27□□□□□ -2.05
RTP1YMR185W RIM21P48565 533 aa2.27□□□□□ -2.05
RTP1YMR185W YDR215CQ12240 137 aa2.27□□□□□ -2.05
RTP1YMR185W ENO1P00924 437 aaKnown RBP2.26□□□□□ -2.05
RTP1YMR185W SUP45P12385 437 aaKnown RBP2.26□□□□□ -2.05
RTP1YMR185W NAB6Q03735 1134 aaKnown RBP RIP-Chip data2.26□□□□□ -2.05not detected
RTP1YMR185W RVB2Q12464 471 aaKnown RBP2.26□□□□□ -2.05
RTP1YMR185W APC1P53886 1748 aa2.26□□□□□ -2.05
RTP1YMR185W SKN7P38889 622 aa2.26□□□□□ -2.05
RTP1YMR185W FPR3P38911 411 aaKnown RBP2.26□□□□□ -2.05
RTP1YMR185W SNF7P39929 240 aaKnown RBP2.26□□□□□ -2.05
RTP1YMR185W BIM1P40013 344 aa2.26□□□□□ -2.05
RTP1YMR185W RGP1P16664 663 aa2.25□□□□□ -2.05
RTP1YMR185W AMN1P38285 549 aaPredicted RBP2.25□□□□□ -2.05
RTP1YMR185W LSB6P42951 607 aa2.25□□□□□ -2.05
RTP1YMR185W TCB2P48231 1178 aa2.25□□□□□ -2.05
RTP1YMR185W SIR4P11978 1358 aa2.25□□□□□ -2.05
RTP1YMR185W USO1P25386 1790 aa2.25□□□□□ -2.05
RTP1YMR185W YCK2P23292 546 aaKnown RBP2.25□□□□□ -2.05
RTP1YMR185W NCL1P38205 684 aaKnown RBP2.25□□□□□ -2.05
RTP1YMR185W KIP3P53086 805 aaKnown RBP2.25□□□□□ -2.05
RTP1YMR185W EAF7P53911 425 aaKnown RBP2.25□□□□□ -2.05
RTP1YMR185W ALO1P54783 526 aaKnown RBP2.25□□□□□ -2.05
RTP1YMR185W NHA1Q99271 985 aa2.25□□□□□ -2.05
RTP1YMR185W EDE1P34216 1381 aa2.25□□□□□ -2.05
RTP1YMR185W LEU1P07264 779 aaKnown RBP2.24□□□□□ -2.05
RTP1YMR185W COQ2P32378 372 aa2.24□□□□□ -2.05
RTP1YMR185W TAF5P38129 798 aa2.24□□□□□ -2.05
RTP1YMR185W ATG32P40458 529 aa2.24□□□□□ -2.05
RTP1YMR185W BUD27P43573 796 aaKnown RBP RIP-Chip data2.24□□□□□ -2.05not detected
RTP1YMR185W TSC13Q99190 310 aa2.24□□□□□ -2.05
RTP1YMR185W TIF1P10081 395 aaKnown RBP2.24□□□□□ -2.05
RTP1YMR185W PGM2P37012 569 aaKnown RBP2.24□□□□□ -2.05
RTP1YMR185W SPR3P41901 512 aa2.24□□□□□ -2.05
RTP1YMR185W YNL165WP53891 406 aa2.24□□□□□ -2.05
RTP1YMR185W YPQ2Q06328 317 aa2.24□□□□□ -2.05
RTP1YMR185W SUI2P20459 304 aaKnown RBP2.24□□□□□ -2.05
RTP1YMR185W OMA1P36163 345 aa2.24□□□□□ -2.05
RTP1YMR185W LSP1Q12230 341 aaKnown RBP2.24□□□□□ -2.05
RTP1YMR185W TY1B-NL2Q99337 1749 aaKnown RBP2.24□□□□□ -2.05
RTP1YMR185W MCM1P11746 286 aa2.23□□□□□ -2.05
RTP1YMR185W SPE2P21182 396 aa2.23□□□□□ -2.05
RTP1YMR185W TPS3P38426 1054 aaKnown RBP2.23□□□□□ -2.05
RTP1YMR185W ALD2P47771 506 aa2.23□□□□□ -2.05
RTP1YMR185W KRE5P22023 1365 aa2.23□□□□□ -2.05
RTP1YMR185W RPS31P05759 152 aaKnown RBP2.23□□□□□ -2.05
RTP1YMR185W YEF3P16521 1044 aaKnown RBP2.23□□□□□ -2.05
RTP1YMR185W RDS2P19541 446 aaKnown RBP2.23□□□□□ -2.05
RTP1YMR185W ROX1P25042 368 aa2.23□□□□□ -2.05
RTP1YMR185W CWH41P53008 833 aa2.23□□□□□ -2.05
RTP1YMR185W FOX2Q02207 900 aaKnown RBP2.23□□□□□ -2.05
RTP1YMR185W YPL034WQ03083 165 aa2.23□□□□□ -2.05
RTP1YMR185W YDL144CQ07589 356 aa2.23□□□□□ -2.05
RTP1YMR185W HEH2Q03281 663 aa2.22□□□□□ -2.05
RTP1YMR185W PSK1P31374 1356 aa2.22□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 30.3 ms