RNA–Protein interactions for RNA: YMR161W

HLJ1, Transcript of Co-chaperone for Hsp40p, yeast

Gene HLJ1, Length 675 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HLJ1	YMR161W	LTV1	P34078	463 aa		5.82	□□□□□ -1.48
HLJ1	YMR161W	NHA1	Q99271	985 aa		5.82	□□□□□ -1.48
HLJ1	YMR161W	USO1	P25386	1790 aa		5.82	□□□□□ -1.48
HLJ1	YMR161W	HSC82	P15108	705 aa	Known RBP	5.81	□□□□□ -1.48
HLJ1	YMR161W	TBS1	P38114	1094 aa		5.81	□□□□□ -1.48
HLJ1	YMR161W	BRL1	P38770	471 aa		5.81	□□□□□ -1.48
HLJ1	YMR161W	BOI2	P39969	1040 aa		5.81	□□□□□ -1.48
HLJ1	YMR161W	THI12	P42883	340 aa		5.81	□□□□□ -1.48
HLJ1	YMR161W	THI5	P43534	340 aa		5.81	□□□□□ -1.48
HLJ1	YMR161W	THI11	P47183	340 aa		5.81	□□□□□ -1.48
HLJ1	YMR161W	SUB1	P54000	292 aa	Known RBP	5.81	□□□□□ -1.48
HLJ1	YMR161W	TFB3	Q03290	321 aa		5.81	□□□□□ -1.48
HLJ1	YMR161W	THI13	Q07748	340 aa		5.81	□□□□□ -1.48
HLJ1	YMR161W	PKC1	P24583	1151 aa		5.8	□□□□□ -1.48
HLJ1	YMR161W	CDC11	P32458	415 aa		5.8	□□□□□ -1.48
HLJ1	YMR161W	YAP3	P38749	330 aa		5.8	□□□□□ -1.48
HLJ1	YMR161W	UTP7	P40055	554 aa	Known RBP	5.8	□□□□□ -1.48
HLJ1	YMR161W	IRC24	P40580	263 aa		5.8	□□□□□ -1.48
HLJ1	YMR161W	UTP13	Q05946	817 aa	Known RBP	5.8	□□□□□ -1.48
HLJ1	YMR161W	GIN4	Q12263	1142 aa		5.8	□□□□□ -1.48
HLJ1	YMR161W	YSP2	Q06681	1438 aa		5.8	□□□□□ -1.48
HLJ1	YMR161W	SMC4	Q12267	1418 aa		5.8	□□□□□ -1.48
HLJ1	YMR161W	SRP54	P20424	541 aa	Known RBP	5.79	□□□□□ -1.48
HLJ1	YMR161W	MAC1	P35192	417 aa		5.79	□□□□□ -1.48
HLJ1	YMR161W	AHP1	P38013	176 aa	Known RBP	5.79	□□□□□ -1.48
HLJ1	YMR161W	SOH1	P38633	127 aa		5.79	□□□□□ -1.48
HLJ1	YMR161W	SLX8	P40072	274 aa		5.79	□□□□□ -1.48
HLJ1	YMR161W	SUM1	P46676	1062 aa		5.79	□□□□□ -1.48
HLJ1	YMR161W	PRP3	Q03338	469 aa	Predicted RBP	5.79	□□□□□ -1.48
HLJ1	YMR161W	VPS72	Q03388	795 aa		5.79	□□□□□ -1.48
HLJ1	YMR161W	NOP8	Q08287	484 aa	Predicted RBP	5.79	□□□□□ -1.48
HLJ1	YMR161W	MYO4	P32492	1471 aa		5.78	□□□□□ -1.48
HLJ1	YMR161W	BIO2	P32451	375 aa		5.78	□□□□□ -1.48
HLJ1	YMR161W	MPP10	P47083	593 aa	Known RBP	5.78	□□□□□ -1.48
HLJ1	YMR161W	HDA3	Q06623	655 aa		5.78	□□□□□ -1.48
HLJ1	YMR161W	SUP45	P12385	437 aa	Known RBP	5.77	□□□□□ -1.49
HLJ1	YMR161W	YMR124W	P39523	943 aa	Known RBP	5.77	□□□□□ -1.49
HLJ1	YMR161W	ATG3	P40344	310 aa		5.77	□□□□□ -1.49
HLJ1	YMR161W	YPP1	P46951	817 aa		5.77	□□□□□ -1.49
HLJ1	YMR161W	ETT1	Q08421	412 aa	Known RBP	5.77	□□□□□ -1.49
HLJ1	YMR161W	APL5	Q08951	932 aa	Known RBP	5.77	□□□□□ -1.49
HLJ1	YMR161W	YVC1	Q12324	675 aa		5.77	□□□□□ -1.49
HLJ1	YMR161W	JJJ2	P46997	583 aa		5.76	□□□□□ -1.49
HLJ1	YMR161W	RRP15	Q06511	250 aa	Predicted RBP	5.76	□□□□□ -1.49
HLJ1	YMR161W	PDR12	Q02785	1511 aa		5.75	□□□□□ -1.49
HLJ1	YMR161W	TY3B-G	Q99315	1547 aa		5.75	□□□□□ -1.49
HLJ1	YMR161W	BUD3	P25558	1636 aa		5.75	□□□□□ -1.49
HLJ1	YMR161W	IRE1	P32361	1115 aa		5.75	□□□□□ -1.49
HLJ1	YMR161W	SHM1	P37292	490 aa	Predicted RBP	5.75	□□□□□ -1.49
HLJ1	YMR161W	ALA1	P40825	983 aa	Known RBP	5.75	□□□□□ -1.49
HLJ1	YMR161W	GRX3	Q03835	250 aa		5.75	□□□□□ -1.49
HLJ1	YMR161W	SNQ2	P32568	1501 aa	Known RBP	5.74	□□□□□ -1.49
HLJ1	YMR161W	ENO2	P00925	437 aa	Known RBP	5.74	□□□□□ -1.49
HLJ1	YMR161W	ROX1	P25042	368 aa		5.74	□□□□□ -1.49
HLJ1	YMR161W	SWI3	P32591	825 aa		5.74	□□□□□ -1.49
HLJ1	YMR161W	TAT1	P38085	619 aa		5.74	□□□□□ -1.49
HLJ1	YMR161W	SIC1	P38634	284 aa		5.74	□□□□□ -1.49
HLJ1	YMR161W	YIR014W	P40570	242 aa		5.74	□□□□□ -1.49
HLJ1	YMR161W	CTR9	P89105	1077 aa		5.74	□□□□□ -1.49
HLJ1	YMR161W	NUP157	P40064	1391 aa	Known RBP	5.74	□□□□□ -1.49
HLJ1	YMR161W	YOR1	P53049	1477 aa		5.74	□□□□□ -1.49
HLJ1	YMR161W	CHC1	P22137	1653 aa	Known RBP	5.74	□□□□□ -1.49
HLJ1	YMR161W	SSA1	P10591	642 aa	Known RBP	5.73	□□□□□ -1.49
HLJ1	YMR161W	SAP190	P36123	1033 aa		5.73	□□□□□ -1.49
HLJ1	YMR161W	PEA2	P40091	420 aa		5.73	□□□□□ -1.49
HLJ1	YMR161W	INP52	P50942	1183 aa		5.73	□□□□□ -1.49
HLJ1	YMR161W	YNL108C	P53929	270 aa		5.73	□□□□□ -1.49
HLJ1	YMR161W	YPL034W	Q03083	165 aa		5.73	□□□□□ -1.49
HLJ1	YMR161W	RPC31	P17890	251 aa		5.72	□□□□□ -1.49
HLJ1	YMR161W	MSH3	P25336	1018 aa		5.72	□□□□□ -1.49
HLJ1	YMR161W	ASF1	P32447	279 aa		5.72	□□□□□ -1.49
HLJ1	YMR161W	PRY1	P47032	299 aa		5.72	□□□□□ -1.49
HLJ1	YMR161W	ALO1	P54783	526 aa	Known RBP	5.72	□□□□□ -1.49
HLJ1	YMR161W	YMR074C	Q04773	145 aa		5.72	□□□□□ -1.49
HLJ1	YMR161W	RPN7	Q06103	429 aa	Known RBP	5.72	□□□□□ -1.49
HLJ1	YMR161W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	5.72	□□□□□ -1.49	not detected
HLJ1	YMR161W	MLP2	P40457	1679 aa		5.72	□□□□□ -1.49
HLJ1	YMR161W	KNS1	P32350	737 aa	Predicted RBP	5.71	□□□□□ -1.5
HLJ1	YMR161W	MET1	P36150	593 aa		5.71	□□□□□ -1.5
HLJ1	YMR161W	HOS4	P40480	1083 aa		5.71	□□□□□ -1.5
HLJ1	YMR161W	RIM21	P48565	533 aa		5.71	□□□□□ -1.5
HLJ1	YMR161W	YPQ2	Q06328	317 aa		5.71	□□□□□ -1.5
HLJ1	YMR161W	POL1	P13382	1468 aa		5.71	□□□□□ -1.5
HLJ1	YMR161W	RPS31	P05759	152 aa	Known RBP	5.7	□□□□□ -1.5
HLJ1	YMR161W	NOT3	P06102	836 aa	Known RBP	5.7	□□□□□ -1.5
HLJ1	YMR161W	PDC5	P16467	563 aa	Known RBP	5.7	□□□□□ -1.5
HLJ1	YMR161W	RDS2	P19541	446 aa	Known RBP	5.7	□□□□□ -1.5
HLJ1	YMR161W	FPS1	P23900	669 aa		5.7	□□□□□ -1.5
HLJ1	YMR161W	PDC6	P26263	563 aa	Known RBP	5.7	□□□□□ -1.5
HLJ1	YMR161W	RAD26	P40352	1085 aa		5.7	□□□□□ -1.5
HLJ1	YMR161W	DSN1	P40568	576 aa		5.7	□□□□□ -1.5
HLJ1	YMR161W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	5.7	□□□□□ -1.5	not detected
HLJ1	YMR161W	SWI5	P08153	709 aa		5.69	□□□□□ -1.5
HLJ1	YMR161W	MRPL16	P38064	232 aa		5.69	□□□□□ -1.5
HLJ1	YMR161W	VID30	P53076	958 aa		5.69	□□□□□ -1.5
HLJ1	YMR161W	DOS2	P54858	310 aa		5.69	□□□□□ -1.5
HLJ1	YMR161W	ERV41	Q04651	352 aa		5.69	□□□□□ -1.5
HLJ1	YMR161W	YLL054C	Q12244	843 aa		5.69	□□□□□ -1.5
HLJ1	YMR161W	EDE1	P34216	1381 aa		5.68	□□□□□ -1.5
HLJ1	YMR161W	BRN1	P38170	754 aa		5.68	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 68 ms