RNA–Protein interactions for RNA: YMR131C

RRB1, Transcript of Nuclear protein involved in early steps of ribosome biogenesis, yeastyeast

Gene RRB1, Length 1,536 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRB1YMR131C GAS4Q08271 471 aa5.78□□□□□ -1.48
RRB1YMR131C RPS24AP0CX31 135 aaKnown RBP5.77□□□□□ -1.49
RRB1YMR131C RPS24BP0CX32 135 aaKnown RBP5.77□□□□□ -1.49
RRB1YMR131C TAP42Q04372 366 aa5.77□□□□□ -1.49
RRB1YMR131C HIM1Q06674 414 aa5.77□□□□□ -1.49
RRB1YMR131C SUI2P20459 304 aaKnown RBP5.76□□□□□ -1.49
RRB1YMR131C NAF1P53919 492 aaKnown RBP5.76□□□□□ -1.49
RRB1YMR131C TEC1P18412 486 aa5.75□□□□□ -1.49
RRB1YMR131C KNS1P32350 737 aaPredicted RBP5.75□□□□□ -1.49
RRB1YMR131C AHP1P38013 176 aaKnown RBP5.75□□□□□ -1.49
RRB1YMR131C YRB30P53107 440 aaPredicted RBP5.75□□□□□ -1.49
RRB1YMR131C IOC4Q04213 475 aa5.75□□□□□ -1.49
RRB1YMR131C SSN3P39073 555 aa5.74□□□□□ -1.49
RRB1YMR131C RPO41P13433 1351 aaKnown RBP5.74□□□□□ -1.49
RRB1YMR131C RAD2P07276 1031 aa5.74□□□□□ -1.49
RRB1YMR131C THI12P42883 340 aa5.74□□□□□ -1.49
RRB1YMR131C THI5P43534 340 aa5.74□□□□□ -1.49
RRB1YMR131C SAP155P43612 1002 aa5.74□□□□□ -1.49
RRB1YMR131C PRY1P47032 299 aa5.74□□□□□ -1.49
RRB1YMR131C THI11P47183 340 aa5.74□□□□□ -1.49
RRB1YMR131C ATG20Q07528 640 aa5.74□□□□□ -1.49
RRB1YMR131C THI13Q07748 340 aa5.74□□□□□ -1.49
RRB1YMR131C FKS3Q04952 1785 aa5.73□□□□□ -1.49
RRB1YMR131C AUS1Q08409 1394 aa5.73□□□□□ -1.49
RRB1YMR131C AVT1P47082 602 aa5.73□□□□□ -1.49
RRB1YMR131C PRD1P25375 712 aa5.72□□□□□ -1.49
RRB1YMR131C RRP46P53256 223 aaPredicted RBP5.72□□□□□ -1.49
RRB1YMR131C ADE6P38972 1358 aaKnown RBP5.71□□□□□ -1.49
RRB1YMR131C DAL5P15365 543 aa5.71□□□□□ -1.5
RRB1YMR131C PDC5P16467 563 aaKnown RBP5.71□□□□□ -1.5
RRB1YMR131C TY1A-DR3Q12441 440 aa5.71□□□□□ -1.5
RRB1YMR131C RRP5Q05022 1729 aaKnown RBP5.71□□□□□ -1.5
RRB1YMR131C YRF1-2P40105 1681 aa5.71□□□□□ -1.5
RRB1YMR131C ARG8P18544 423 aa5.7□□□□□ -1.5
RRB1YMR131C BUD27P43573 796 aaKnown RBP RIP-Chip data5.7□□□□□ -1.5not detected
RRB1YMR131C THI22Q06490 572 aa5.7□□□□□ -1.5
RRB1YMR131C RPC31P17890 251 aa5.69□□□□□ -1.5
RRB1YMR131C URB1P34241 1764 aaKnown RBP5.69□□□□□ -1.5
RRB1YMR131C YIL177CP40434 1758 aa5.69□□□□□ -1.5
RRB1YMR131C YJL225CP40889 1758 aa5.69□□□□□ -1.5
RRB1YMR131C PRP45P28004 379 aaPredicted RBP5.69□□□□□ -1.5
RRB1YMR131C AKL1P38080 1108 aaKnown RBP5.69□□□□□ -1.5
RRB1YMR131C LEO1P38439 464 aa5.69□□□□□ -1.5
RRB1YMR131C PRP43P53131 767 aaKnown RBP5.69□□□□□ -1.5
RRB1YMR131C NAB6Q03735 1134 aaKnown RBP RIP-Chip data5.69□□□□□ -1.5not detected
RRB1YMR131C YPR084WQ06821 456 aa5.69□□□□□ -1.5
RRB1YMR131C RTT109Q07794 436 aa5.69□□□□□ -1.5
RRB1YMR131C PKH3Q03306 898 aaPredicted RBP5.68□□□□□ -1.5
RRB1YMR131C APC1P53886 1748 aa5.67□□□□□ -1.5
RRB1YMR131C PRP5P21372 849 aaPredicted RBP5.67□□□□□ -1.5
RRB1YMR131C GUT2P32191 649 aa5.67□□□□□ -1.5
RRB1YMR131C YBR287WP38355 427 aa5.67□□□□□ -1.5
RRB1YMR131C WTM2Q12206 467 aa5.67□□□□□ -1.5
RRB1YMR131C HSP104P31539 908 aaKnown RBP5.66□□□□□ -1.5
RRB1YMR131C ZDS1P50111 915 aaKnown RBP5.66□□□□□ -1.5
RRB1YMR131C DSD1P53095 428 aa5.66□□□□□ -1.5
RRB1YMR131C ATF2P53296 535 aa5.66□□□□□ -1.5
RRB1YMR131C SIR4P11978 1358 aa5.66□□□□□ -1.5
RRB1YMR131C RRT14P40470 206 aa5.65□□□□□ -1.5
RRB1YMR131C YIL092WP40497 633 aa5.65□□□□□ -1.5
RRB1YMR131C HEF3P53978 1044 aaKnown RBP5.65□□□□□ -1.5
RRB1YMR131C GYP7P48365 746 aa5.64□□□□□ -1.51
RRB1YMR131C PUF6Q04373 656 aaKnown RBP5.64□□□□□ -1.51
RRB1YMR131C AOS1Q06624 347 aa5.64□□□□□ -1.51
RRB1YMR131C TPS3P38426 1054 aaKnown RBP5.64□□□□□ -1.51
RRB1YMR131C MAM1P40065 302 aa5.64□□□□□ -1.51
RRB1YMR131C POL32P47110 350 aa5.64□□□□□ -1.51
RRB1YMR131C NOP8Q08287 484 aaPredicted RBP5.64□□□□□ -1.51
RRB1YMR131C MRPL16P38064 232 aa5.63□□□□□ -1.51
RRB1YMR131C YNL050CP53952 270 aa5.63□□□□□ -1.51
RRB1YMR131C FRA1Q07825 749 aa5.63□□□□□ -1.51
RRB1YMR131C SPB4P25808 606 aaPredicted RBP5.62□□□□□ -1.51
RRB1YMR131C XKS1P42826 600 aa5.62□□□□□ -1.51
RRB1YMR131C NSE3Q05541 303 aa5.62□□□□□ -1.51
RRB1YMR131C SLM3Q12093 417 aa5.62□□□□□ -1.51
RRB1YMR131C YRF1-4O13559 1382 aa5.61□□□□□ -1.51
RRB1YMR131C DAT1P13483 248 aaKnown RBP5.61□□□□□ -1.51
RRB1YMR131C NTH2P35172 780 aa5.61□□□□□ -1.51
RRB1YMR131C IRE1P32361 1115 aa5.6□□□□□ -1.51
RRB1YMR131C ALA1P40825 983 aaKnown RBP5.6□□□□□ -1.51
RRB1YMR131C CTF4Q01454 927 aa5.6□□□□□ -1.51
RRB1YMR131C SRT1Q03175 343 aa5.6□□□□□ -1.51
RRB1YMR131C BMS1Q08965 1183 aaKnown RBP5.6□□□□□ -1.51
RRB1YMR131C EDE1P34216 1381 aa5.6□□□□□ -1.51
RRB1YMR131C SPT2P06843 333 aaPredicted RBP5.59□□□□□ -1.51
RRB1YMR131C KCC4P25389 1037 aa5.59□□□□□ -1.51
RRB1YMR131C YFR016CP43597 1233 aaKnown RBP5.59□□□□□ -1.51
RRB1YMR131C EAF7P53911 425 aaKnown RBP5.59□□□□□ -1.51
RRB1YMR131C TY1A-DR2Q03964 440 aaKnown RBP5.59□□□□□ -1.51
RRB1YMR131C COQ4O13525 335 aa5.58□□□□□ -1.52
RRB1YMR131C YNG2P38806 282 aaKnown RBP5.58□□□□□ -1.52
RRB1YMR131C YPP1P46951 817 aa5.58□□□□□ -1.52
RRB1YMR131C TBS1P38114 1094 aa5.58□□□□□ -1.52
RRB1YMR131C NMD2P38798 1089 aaKnown RBP5.58□□□□□ -1.52
RRB1YMR131C BUD9P53226 547 aa5.58□□□□□ -1.52
RRB1YMR131C SPO1P53541 631 aa5.58□□□□□ -1.52
RRB1YMR131C MEC3Q02574 474 aa5.58□□□□□ -1.52
RRB1YMR131C RSF2P46974 1380 aa5.57□□□□□ -1.52
RRB1YMR131C JJJ2P46997 583 aa5.57□□□□□ -1.52
RRB1YMR131C ECM16Q04217 1267 aaKnown RBP5.57□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 82.8 ms