RNA–Protein interactions for RNA: YLR398C

SKI2, Transcript of Ski complex component and putative RNA helicase, yeastyeast

Gene SKI2, Length 3,864 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKI2YLR398C YKE2P52553 114 aa6.83□□□□□ -1.32
SKI2YLR398C YPL191CQ08930 360 aa6.83□□□□□ -1.32
SKI2YLR398C TAF1P46677 1066 aa6.83□□□□□ -1.32
SKI2YLR398C YGL242CP53066 181 aa6.83□□□□□ -1.32
SKI2YLR398C YLH47Q06493 454 aa6.83□□□□□ -1.32
SKI2YLR398C PSR1Q07800 427 aa6.83□□□□□ -1.32
SKI2YLR398C YLR001CQ07895 862 aa6.83□□□□□ -1.32
SKI2YLR398C AFT2Q08957 416 aa6.83□□□□□ -1.32
SKI2YLR398C SEC39Q12745 709 aa6.83□□□□□ -1.32
SKI2YLR398C BRR1Q99177 341 aaPredicted RBP6.83□□□□□ -1.32
SKI2YLR398C PSK1P31374 1356 aa6.83□□□□□ -1.32
SKI2YLR398C DNF3Q12674 1656 aa6.82□□□□□ -1.32
SKI2YLR398C HSC82P15108 705 aaKnown RBP6.82□□□□□ -1.32
SKI2YLR398C SEC14P24280 304 aaKnown RBP6.82□□□□□ -1.32
SKI2YLR398C TOA1P32773 286 aa6.82□□□□□ -1.32
SKI2YLR398C PEX5P35056 612 aa6.82□□□□□ -1.32
SKI2YLR398C ALD2P47771 506 aa6.82□□□□□ -1.32
SKI2YLR398C CPR6P53691 371 aaKnown RBP6.82□□□□□ -1.32
SKI2YLR398C YMR114CQ04471 368 aaKnown RBP6.82□□□□□ -1.32
SKI2YLR398C YPL216WQ08964 1102 aa6.82□□□□□ -1.32
SKI2YLR398C ATE1P16639 503 aa6.82□□□□□ -1.32
SKI2YLR398C RAD53P22216 821 aa6.82□□□□□ -1.32
SKI2YLR398C BUD14P27637 709 aa6.82□□□□□ -1.32
SKI2YLR398C GTR1Q00582 310 aa6.82□□□□□ -1.32
SKI2YLR398C GLE1Q12315 538 aa6.82□□□□□ -1.32
SKI2YLR398C TY1B-NL2Q99337 1749 aaKnown RBP6.82□□□□□ -1.32
SKI2YLR398C VPS34P22543 875 aa6.82□□□□□ -1.32
SKI2YLR398C RDS1P25611 832 aa6.82□□□□□ -1.32
SKI2YLR398C SWI3P32591 825 aa6.82□□□□□ -1.32
SKI2YLR398C MIF2P35201 549 aa6.82□□□□□ -1.32
SKI2YLR398C YJR142WP47173 342 aa6.82□□□□□ -1.32
SKI2YLR398C VPS72Q03388 795 aa6.82□□□□□ -1.32
SKI2YLR398C ETP1P38748 585 aaKnown RBP6.81□□□□□ -1.32
SKI2YLR398C TRS85P46944 698 aa6.81□□□□□ -1.32
SKI2YLR398C ILM1P47155 203 aa6.81□□□□□ -1.32
SKI2YLR398C SYH1Q02875 849 aaKnown RBP6.81□□□□□ -1.32
SKI2YLR398C BUD3P25558 1636 aa6.81□□□□□ -1.32
SKI2YLR398C BYE1P36106 594 aa6.81□□□□□ -1.32
SKI2YLR398C WAR1Q03631 944 aa6.81□□□□□ -1.32
SKI2YLR398C YKU80Q04437 629 aa6.81□□□□□ -1.32
SKI2YLR398C CAT8P39113 1433 aa6.81□□□□□ -1.32
SKI2YLR398C APE4P38821 490 aa6.81□□□□□ -1.32
SKI2YLR398C YDR338CQ05497 695 aa6.81□□□□□ -1.32
SKI2YLR398C PRE10P21242 288 aaKnown RBP RIP-Chip data6.8□□□□□ -1.32not detected
SKI2YLR398C BDH2P39713 417 aa6.8□□□□□ -1.32
SKI2YLR398C MMR1Q06324 491 aa6.8□□□□□ -1.32
SKI2YLR398C ARG1P22768 420 aa6.8□□□□□ -1.32
SKI2YLR398C SRB4P32569 687 aa6.8□□□□□ -1.32
SKI2YLR398C EXO84P38261 753 aa6.8□□□□□ -1.32
SKI2YLR398C YBP1P38315 674 aa6.8□□□□□ -1.32
SKI2YLR398C YMR1P47147 688 aaKnown RBP RIP-Chip data6.8□□□□□ -1.32not detected
SKI2YLR398C GFD1Q04839 188 aaKnown RBP6.8□□□□□ -1.32
SKI2YLR398C APL4Q12028 832 aa6.8□□□□□ -1.32
SKI2YLR398C IML1P47170 1584 aa6.8□□□□□ -1.32
SKI2YLR398C LEU2P04173 364 aaPredicted RBP6.8□□□□□ -1.32
SKI2YLR398C UBC1P21734 215 aaKnown RBP6.8□□□□□ -1.32
SKI2YLR398C GCD6P32501 712 aaKnown RBP6.8□□□□□ -1.32
SKI2YLR398C YKR018CP36114 725 aa6.8□□□□□ -1.32
SKI2YLR398C AKL1P38080 1108 aaKnown RBP6.8□□□□□ -1.32
SKI2YLR398C FZO1P38297 855 aa6.8□□□□□ -1.32
SKI2YLR398C TDA11P38854 504 aa6.8□□□□□ -1.32
SKI2YLR398C TY4A-JP47023 414 aa6.8□□□□□ -1.32
SKI2YLR398C HAP5Q02516 242 aa6.8□□□□□ -1.32
SKI2YLR398C RAD9P14737 1309 aa6.79□□□□□ -1.32
SKI2YLR398C ARD1P07347 238 aaPredicted RBP6.79□□□□□ -1.32
SKI2YLR398C EFT1P32324 842 aaKnown RBP6.79□□□□□ -1.32
SKI2YLR398C YKR023WP36119 530 aaKnown RBP6.79□□□□□ -1.32
SKI2YLR398C TIF4631P39935 952 aaKnown RBP6.79□□□□□ -1.32
SKI2YLR398C SIT1P39980 628 aa6.79□□□□□ -1.32
SKI2YLR398C KAP123P40069 1113 aaKnown RBP6.79□□□□□ -1.32
SKI2YLR398C TFG1P41895 735 aaPredicted RBP6.79□□□□□ -1.32
SKI2YLR398C SUB1P54000 292 aaKnown RBP6.79□□□□□ -1.32
SKI2YLR398C MGR3Q04472 501 aa6.79□□□□□ -1.32
SKI2YLR398C SLK19Q08581 821 aaKnown RBP6.79□□□□□ -1.32
SKI2YLR398C POL3P15436 1097 aa6.79□□□□□ -1.32
SKI2YLR398C FRS2P15625 503 aaKnown RBP6.79□□□□□ -1.32
SKI2YLR398C YEF3P16521 1044 aaKnown RBP6.79□□□□□ -1.32
SKI2YLR398C CBF2P32504 956 aa6.79□□□□□ -1.32
SKI2YLR398C NIP100P33420 868 aa6.79□□□□□ -1.32
SKI2YLR398C RIO2P40160 425 aaKnown RBP6.79□□□□□ -1.32
SKI2YLR398C CPA2P03965 1118 aaKnown RBP6.79□□□□□ -1.32
SKI2YLR398C CLN2P20438 545 aa6.79□□□□□ -1.32
SKI2YLR398C UBC6P33296 250 aaPredicted RBP6.79□□□□□ -1.32
SKI2YLR398C XRS2P33301 854 aa6.79□□□□□ -1.32
SKI2YLR398C SAS3P34218 831 aa6.79□□□□□ -1.32
SKI2YLR398C SET1P38827 1080 aaKnown RBP6.79□□□□□ -1.32
SKI2YLR398C PWP1P21304 576 aaKnown RBP6.78□□□□□ -1.32
SKI2YLR398C CCT2P39076 527 aaKnown RBP6.78□□□□□ -1.32
SKI2YLR398C AIM20P40451 204 aa6.78□□□□□ -1.32
SKI2YLR398C SRT1Q03175 343 aa6.78□□□□□ -1.32
SKI2YLR398C LPD1P09624 499 aaKnown RBP6.78□□□□□ -1.32
SKI2YLR398C VAN1P23642 535 aa6.78□□□□□ -1.32
SKI2YLR398C BEM4P39011 633 aa6.78□□□□□ -1.32
SKI2YLR398C MCM6P53091 1017 aaKnown RBP6.78□□□□□ -1.32
SKI2YLR398C SEC2P17065 759 aa6.78□□□□□ -1.32
SKI2YLR398C MSH1P25846 959 aa6.77□□□□□ -1.32
SKI2YLR398C FKH1P40466 484 aa6.77□□□□□ -1.32
SKI2YLR398C RNR4P49723 345 aaKnown RBP6.77□□□□□ -1.32
SKI2YLR398C YGR016WP53209 190 aa6.77□□□□□ -1.32
SKI2YLR398C SMD2Q06217 110 aaKnown RBP6.77□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 65.2 ms