RNA–Protein interactions for RNA: YLR397C

AFG2, Transcript of ATPase of the CDC48/PAS1/SEC18 (AAA) family, forms a hexameric complex, yeastyeast

Gene AFG2, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFG2YLR397C CPS1P27614 576 aa8.07□□□□□ -1.12
AFG2YLR397C NPL6P32832 435 aa8.07□□□□□ -1.12
AFG2YLR397C FYV10P40492 516 aa8.07□□□□□ -1.12
AFG2YLR397C SEC27P41811 889 aaKnown RBP8.07□□□□□ -1.12
AFG2YLR397C ESF2P53743 316 aaKnown RBP8.07□□□□□ -1.12
AFG2YLR397C FMP30Q02883 468 aa8.07□□□□□ -1.12
AFG2YLR397C NKP2Q06162 153 aa8.07□□□□□ -1.12
AFG2YLR397C PSK2Q08217 1101 aa8.07□□□□□ -1.12
AFG2YLR397C SLK19Q08581 821 aaKnown RBP8.07□□□□□ -1.12
AFG2YLR397C MCM16Q12262 181 aa8.07□□□□□ -1.12
AFG2YLR397C TY4A-HQ6Q5P6 413 aa8.07□□□□□ -1.12
AFG2YLR397C SAC3P46674 1301 aa8.06□□□□□ -1.12
AFG2YLR397C TTI1P36097 1038 aa8.06□□□□□ -1.12
AFG2YLR397C ATG14P38270 344 aa8.06□□□□□ -1.12
AFG2YLR397C REI1P38344 393 aaPredicted RBP8.06□□□□□ -1.12
AFG2YLR397C RCM1P53972 490 aa8.06□□□□□ -1.12
AFG2YLR397C HEL2Q05580 639 aaKnown RBP8.06□□□□□ -1.12
AFG2YLR397C YPR172WQ06608 200 aa8.06□□□□□ -1.12
AFG2YLR397C LAM6Q08001 693 aa8.06□□□□□ -1.12
AFG2YLR397C APL4Q12028 832 aa8.06□□□□□ -1.12
AFG2YLR397C GCD2P12754 651 aaPredicted RBP8.06□□□□□ -1.12
AFG2YLR397C RIB7P33312 244 aa8.06□□□□□ -1.12
AFG2YLR397C MPT5P39016 859 aaKnown RBP RIP-Chip data8.06□□□□□ -1.12not detected
AFG2YLR397C BUD27P43573 796 aaKnown RBP RIP-Chip data8.06□□□□□ -1.12not detected
AFG2YLR397C VPS53P47061 822 aa8.06□□□□□ -1.12
AFG2YLR397C MGR3Q04472 501 aa8.06□□□□□ -1.12
AFG2YLR397C YPQ2Q06328 317 aa8.06□□□□□ -1.12
AFG2YLR397C NOP12Q08208 459 aaKnown RBP8.06□□□□□ -1.12
AFG2YLR397C PRT1P06103 763 aaKnown RBP8.05□□□□□ -1.12
AFG2YLR397C MAM1P40065 302 aa8.05□□□□□ -1.12
AFG2YLR397C RLP7P40693 322 aaKnown RBP8.05□□□□□ -1.12
AFG2YLR397C CAF130P53280 1122 aaPredicted RBP8.05□□□□□ -1.12
AFG2YLR397C MFM1Q02783 413 aa8.05□□□□□ -1.12
AFG2YLR397C BRE1Q07457 700 aaKnown RBP8.05□□□□□ -1.12
AFG2YLR397C ARO1P08566 1588 aaKnown RBP8.05□□□□□ -1.12
AFG2YLR397C HXT5P38695 592 aa8.04□□□□□ -1.12
AFG2YLR397C RRP46P53256 223 aaPredicted RBP8.04□□□□□ -1.12
AFG2YLR397C GCR2Q01722 534 aa8.04□□□□□ -1.12
AFG2YLR397C VTC3Q02725 835 aa8.04□□□□□ -1.12
AFG2YLR397C FAR8Q05040 523 aa8.04□□□□□ -1.12
AFG2YLR397C AVO1Q08236 1176 aa8.04□□□□□ -1.12
AFG2YLR397C YOL098CQ12496 1037 aa8.04□□□□□ -1.12
AFG2YLR397C CMP2P14747 604 aa8.04□□□□□ -1.12
AFG2YLR397C GAL11P19659 1081 aa8.04□□□□□ -1.12
AFG2YLR397C IME1P21190 360 aa8.04□□□□□ -1.12
AFG2YLR397C BUD14P27637 709 aa8.04□□□□□ -1.12
AFG2YLR397C BRL1P38770 471 aa8.04□□□□□ -1.12
AFG2YLR397C RBL2P48606 106 aaKnown RBP8.04□□□□□ -1.12
AFG2YLR397C YGL242CP53066 181 aa8.04□□□□□ -1.12
AFG2YLR397C MON1P53129 644 aa8.04□□□□□ -1.12
AFG2YLR397C ULS1Q08562 1619 aa8.04□□□□□ -1.12
AFG2YLR397C ARD1P07347 238 aaPredicted RBP8.03□□□□□ -1.12
AFG2YLR397C SUI3P09064 285 aaKnown RBP8.03□□□□□ -1.12
AFG2YLR397C TUP1P16649 713 aa8.03□□□□□ -1.12
AFG2YLR397C RPC37P36121 282 aa8.03□□□□□ -1.12
AFG2YLR397C PIH1P38768 344 aa8.03□□□□□ -1.12
AFG2YLR397C ECL1P48235 211 aa8.03□□□□□ -1.12
AFG2YLR397C TSR1Q07381 788 aaKnown RBP8.03□□□□□ -1.12
AFG2YLR397C VAM6Q07468 1049 aa8.03□□□□□ -1.12
AFG2YLR397C TMA16Q08687 178 aa8.03□□□□□ -1.12
AFG2YLR397C ATG9Q12142 997 aa8.03□□□□□ -1.12
AFG2YLR397C ADH4P10127 382 aa8.03□□□□□ -1.12
AFG2YLR397C KES1P35844 434 aaKnown RBP8.03□□□□□ -1.12
AFG2YLR397C DAS1P47005 663 aa8.03□□□□□ -1.12
AFG2YLR397C MUB1Q03162 620 aa8.03□□□□□ -1.12
AFG2YLR397C STE6P12866 1290 aa8.02□□□□□ -1.13
AFG2YLR397C APD1P38281 316 aa8.02□□□□□ -1.13
AFG2YLR397C FAP1P53971 965 aa8.02□□□□□ -1.13
AFG2YLR397C ASI1P54074 624 aa8.02□□□□□ -1.13
AFG2YLR397C SMD2Q06217 110 aaKnown RBP8.02□□□□□ -1.13
AFG2YLR397C MPC54Q08550 464 aa8.02□□□□□ -1.13
AFG2YLR397C HIS3P06633 220 aa8.02□□□□□ -1.13
AFG2YLR397C LOS1P33418 1100 aaPredicted RBP8.02□□□□□ -1.13
AFG2YLR397C MET10P39692 1035 aa8.02□□□□□ -1.13
AFG2YLR397C STB1P42845 420 aa8.02□□□□□ -1.13
AFG2YLR397C OCA1P50946 238 aaPredicted RBP8.02□□□□□ -1.13
AFG2YLR397C MSN5P52918 1224 aa8.02□□□□□ -1.13
AFG2YLR397C UTP22P53254 1237 aaPredicted RBP8.02□□□□□ -1.13
AFG2YLR397C RIA1P53893 1110 aa8.02□□□□□ -1.13
AFG2YLR397C SYF1Q04048 859 aaPredicted RBP8.02□□□□□ -1.13
AFG2YLR397C SNF2P22082 1703 aa8.01□□□□□ -1.13
AFG2YLR397C VAS1P07806 1104 aaKnown RBP8.01□□□□□ -1.13
AFG2YLR397C SRL3P36167 246 aa8.01□□□□□ -1.13
AFG2YLR397C VTC2P43585 828 aa8.01□□□□□ -1.13
AFG2YLR397C ENT3P47160 408 aa8.01□□□□□ -1.13
AFG2YLR397C NOP15P53927 220 aaPredicted RBP8.01□□□□□ -1.13
AFG2YLR397C TFB2Q02939 513 aa8.01□□□□□ -1.13
AFG2YLR397C RSM28Q03430 361 aa8.01□□□□□ -1.13
AFG2YLR397C YLR177WQ06251 628 aa8.01□□□□□ -1.13
AFG2YLR397C BDF2Q07442 638 aa8.01□□□□□ -1.13
AFG2YLR397C BUD7Q08754 746 aa8.01□□□□□ -1.13
AFG2YLR397C TY3B-IQ7LHG5 1498 aaKnown RBP8.01□□□□□ -1.13
AFG2YLR397C TY2B-LR1P0C2J3 1770 aa8.01□□□□□ -1.13
AFG2YLR397C TY2B-FP0CX63 1770 aa8.01□□□□□ -1.13
AFG2YLR397C TY2B-GR2P0CX64 1770 aa8.01□□□□□ -1.13
AFG2YLR397C TY2B-CP25384 1770 aa8.01□□□□□ -1.13
AFG2YLR397C TY2B-DR2Q03494 1770 aa8.01□□□□□ -1.13
AFG2YLR397C TY1B-DR1Q03855 1755 aa8.01□□□□□ -1.13
AFG2YLR397C TY2B-DR3Q07791 1770 aaKnown RBP8.01□□□□□ -1.13
AFG2YLR397C TY2B-OR1Q12113 1770 aa8.01□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 37.5 ms