RNA–Protein interactions for RNA: YLR336C

SGD1, Transcript of Essential nuclear protein, yeastyeast

Gene SGD1, Length 2,700 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGD1YLR336C CIC1P38779 376 aaKnown RBP3.29□□□□□ -1.88
SGD1YLR336C FAA3P39002 694 aa3.29□□□□□ -1.88
SGD1YLR336C RPS26AP39938 119 aaKnown RBP3.29□□□□□ -1.88
SGD1YLR336C RPS26BP39939 119 aaKnown RBP3.29□□□□□ -1.88
SGD1YLR336C PPT1P53043 513 aa3.29□□□□□ -1.88
SGD1YLR336C TY1A-DR2Q03964 440 aaKnown RBP3.28□□□□□ -1.88
SGD1YLR336C SYT1Q06836 1226 aa3.28□□□□□ -1.88
SGD1YLR336C YDR461C-AQ2V2P7 80 aa3.28□□□□□ -1.88
SGD1YLR336C HXK1P04806 485 aaKnown RBP3.28□□□□□ -1.88
SGD1YLR336C YJL181WP46987 611 aa3.28□□□□□ -1.88
SGD1YLR336C DAL4Q04895 635 aa3.28□□□□□ -1.88
SGD1YLR336C PRK1P40494 810 aa3.28□□□□□ -1.89
SGD1YLR336C MON1P53129 644 aa3.28□□□□□ -1.89
SGD1YLR336C NOP7P53261 605 aaKnown RBP3.28□□□□□ -1.89
SGD1YLR336C HEH2Q03281 663 aa3.28□□□□□ -1.89
SGD1YLR336C YCS4Q06156 1176 aa3.28□□□□□ -1.89
SGD1YLR336C OXR1Q08952 273 aa3.28□□□□□ -1.89
SGD1YLR336C CYC8P14922 966 aa3.27□□□□□ -1.89
SGD1YLR336C CEM1P39525 442 aa3.27□□□□□ -1.89
SGD1YLR336C LYS5P50113 272 aa3.27□□□□□ -1.89
SGD1YLR336C NUT1P53114 1132 aa3.27□□□□□ -1.89
SGD1YLR336C YGR122WP53272 402 aa3.27□□□□□ -1.89
SGD1YLR336C ALD3P54114 506 aa3.27□□□□□ -1.89
SGD1YLR336C RPP1AP05318 106 aaPredicted RBP3.27□□□□□ -1.89
SGD1YLR336C PRP40P33203 583 aaKnown RBP3.27□□□□□ -1.89
SGD1YLR336C TFA2P36145 328 aa3.27□□□□□ -1.89
SGD1YLR336C MET10P39692 1035 aa3.27□□□□□ -1.89
SGD1YLR336C MSH6Q03834 1242 aa3.27□□□□□ -1.89
SGD1YLR336C INP51P40559 946 aaKnown RBP3.26□□□□□ -1.89
SGD1YLR336C RAD2P07276 1031 aa3.26□□□□□ -1.89
SGD1YLR336C FUS1P11710 512 aa3.26□□□□□ -1.89
SGD1YLR336C MCM5P29496 775 aaKnown RBP3.26□□□□□ -1.89
SGD1YLR336C ECM2P38241 364 aaKnown RBP3.26□□□□□ -1.89
SGD1YLR336C GLO4Q12320 285 aa3.26□□□□□ -1.89
SGD1YLR336C CMR1Q12510 522 aaKnown RBP3.26□□□□□ -1.89
SGD1YLR336C RIM11P38615 370 aa3.25□□□□□ -1.89
SGD1YLR336C BIO5P53744 561 aaKnown RBP3.25□□□□□ -1.89
SGD1YLR336C ULP1Q02724 621 aa3.25□□□□□ -1.89
SGD1YLR336C JIP5Q06214 492 aaPredicted RBP3.25□□□□□ -1.89
SGD1YLR336C HVG1P0CE11 249 aa3.25□□□□□ -1.89
SGD1YLR336C NPR1P22211 790 aa3.25□□□□□ -1.89
SGD1YLR336C PEP7P32609 515 aa3.25□□□□□ -1.89
SGD1YLR336C AMN1P38285 549 aaPredicted RBP3.25□□□□□ -1.89
SGD1YLR336C SAP155P43612 1002 aa3.25□□□□□ -1.89
SGD1YLR336C RSC2Q06488 889 aa3.25□□□□□ -1.89
SGD1YLR336C RVS167P39743 482 aaKnown RBP3.24□□□□□ -1.89
SGD1YLR336C HPF1Q05164 967 aa3.24□□□□□ -1.89
SGD1YLR336C MAG2Q06436 670 aaKnown RBP3.24□□□□□ -1.89
SGD1YLR336C PRP5P21372 849 aaPredicted RBP3.24□□□□□ -1.89
SGD1YLR336C PIC2P40035 300 aa3.24□□□□□ -1.89
SGD1YLR336C YJR124CP47159 448 aa3.24□□□□□ -1.89
SGD1YLR336C YNR065CP53751 1116 aa3.24□□□□□ -1.89
SGD1YLR336C YAF9P53930 226 aa3.24□□□□□ -1.89
SGD1YLR336C YPL109CQ02981 657 aa3.24□□□□□ -1.89
SGD1YLR336C GPM1P00950 247 aaKnown RBP3.23□□□□□ -1.89
SGD1YLR336C PRE9P23638 258 aaKnown RBP3.23□□□□□ -1.89
SGD1YLR336C LSB6P42951 607 aa3.23□□□□□ -1.89
SGD1YLR336C SVF1Q05515 481 aa3.23□□□□□ -1.89
SGD1YLR336C PDC5P16467 563 aaKnown RBP3.23□□□□□ -1.89
SGD1YLR336C ADI1Q03677 179 aa3.23□□□□□ -1.89
SGD1YLR336C MRPS18P42847 217 aa3.22□□□□□ -1.89
SGD1YLR336C JJJ3P47138 172 aa3.22□□□□□ -1.89
SGD1YLR336C ESF1Q06344 628 aaKnown RBP3.22□□□□□ -1.89
SGD1YLR336C PMT7Q06644 662 aa3.22□□□□□ -1.89
SGD1YLR336C SOG2Q08817 791 aa3.22□□□□□ -1.89
SGD1YLR336C RMD1Q03441 430 aa3.22□□□□□ -1.89
SGD1YLR336C MTC5Q03897 1148 aa3.22□□□□□ -1.89
SGD1YLR336C HEM13P11353 328 aaKnown RBP3.21□□□□□ -1.89
SGD1YLR336C KAR2P16474 682 aaKnown RBP3.21□□□□□ -1.89
SGD1YLR336C NAR1P23503 491 aaKnown RBP3.21□□□□□ -1.89
SGD1YLR336C KNS1P32350 737 aaPredicted RBP3.21□□□□□ -1.89
SGD1YLR336C SOK2P53438 785 aaPredicted RBP3.21□□□□□ -1.89
SGD1YLR336C MCD1Q12158 566 aa3.21□□□□□ -1.89
SGD1YLR336C VPS16Q03308 798 aa3.21□□□□□ -1.9
SGD1YLR336C PET112P33893 541 aa3.21□□□□□ -1.9
SGD1YLR336C PEX13P80667 386 aa3.21□□□□□ -1.9
SGD1YLR336C NOG1Q02892 647 aaKnown RBP3.21□□□□□ -1.9
SGD1YLR336C HAS1Q03532 505 aaKnown RBP3.21□□□□□ -1.9
SGD1YLR336C GIS4Q04233 774 aa3.21□□□□□ -1.9
SGD1YLR336C GCR1P07261 785 aa3.2□□□□□ -1.9
SGD1YLR336C HTS1P07263 546 aaKnown RBP3.2□□□□□ -1.9
SGD1YLR336C MSH3P25336 1018 aa3.2□□□□□ -1.9
SGD1YLR336C PGM2P37012 569 aaKnown RBP3.2□□□□□ -1.9
SGD1YLR336C GIP2P40036 548 aa3.2□□□□□ -1.9
SGD1YLR336C RSM26P47141 266 aa3.2□□□□□ -1.9
SGD1YLR336C YGR035CP53222 116 aa3.2□□□□□ -1.9
SGD1YLR336C PIN2Q12057 282 aa3.2□□□□□ -1.9
SGD1YLR336C TY1A-LR4P0C2I8 440 aaKnown RBP3.2□□□□□ -1.9
SGD1YLR336C TY1A-DR6P0CX70 440 aa3.2□□□□□ -1.9
SGD1YLR336C TY1A-ER1P0CX71 440 aa3.2□□□□□ -1.9
SGD1YLR336C TY1A-LR2P0CX72 440 aa3.2□□□□□ -1.9
SGD1YLR336C TY1A-PLP0CX73 440 aa3.2□□□□□ -1.9
SGD1YLR336C TY1A-JR1P0CX74 440 aa3.2□□□□□ -1.9
SGD1YLR336C TY1A-LR3P0CX75 440 aa3.2□□□□□ -1.9
SGD1YLR336C TY1A-ML2P0CX76 440 aa3.2□□□□□ -1.9
SGD1YLR336C TRK2P28584 889 aa3.2□□□□□ -1.9
SGD1YLR336C EXO5P38289 585 aa3.2□□□□□ -1.9
SGD1YLR336C PEX28P38848 579 aa3.2□□□□□ -1.9
SGD1YLR336C NEO1P40527 1151 aa3.2□□□□□ -1.9
SGD1YLR336C TED1P40533 473 aa3.2□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 35.5 ms