RNA–Protein interactions for RNA: YLR335W

NUP2, Transcript of Nucleoporin involved in nucleocytoplasmic transport, yeast

Gene NUP2, Length 2,163 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP2	YLR335W	ASF1	P32447	279 aa		5	□□□□□ -1.61
NUP2	YLR335W	RTT107	P38850	1070 aa		5	□□□□□ -1.61
NUP2	YLR335W	PIB2	P53191	635 aa		5	□□□□□ -1.61
NUP2	YLR335W	HCR1	Q05775	265 aa	Known RBP	5	□□□□□ -1.61
NUP2	YLR335W	PHM7	Q12252	991 aa		5	□□□□□ -1.61
NUP2	YLR335W	PIF1	P07271	859 aa		4.99	□□□□□ -1.61
NUP2	YLR335W	PET123	P17558	318 aa		4.99	□□□□□ -1.61
NUP2	YLR335W	PHO13	P19881	312 aa		4.99	□□□□□ -1.61
NUP2	YLR335W	DIT2	P21595	489 aa		4.99	□□□□□ -1.61
NUP2	YLR335W	NPL4	P33755	580 aa		4.99	□□□□□ -1.61
NUP2	YLR335W	SAP190	P36123	1033 aa		4.99	□□□□□ -1.61
NUP2	YLR335W	CRG1	P38892	291 aa	RIP-Chip data	4.99	□□□□□ -1.61	not detected
NUP2	YLR335W	VPS41	P38959	992 aa		4.99	□□□□□ -1.61
NUP2	YLR335W	FYV10	P40492	516 aa		4.99	□□□□□ -1.61
NUP2	YLR335W	MVP1	P40959	511 aa	Known RBP	4.99	□□□□□ -1.61
NUP2	YLR335W	PKH1	Q03407	766 aa		4.99	□□□□□ -1.61
NUP2	YLR335W	SML1	Q04964	104 aa		4.99	□□□□□ -1.61
NUP2	YLR335W	YPR204W	Q08995	1032 aa		4.99	□□□□□ -1.61
NUP2	YLR335W	YKL068W-A	Q3E826	78 aa		4.99	□□□□□ -1.61
NUP2	YLR335W	SSK22	P25390	1331 aa	Predicted RBP	4.99	□□□□□ -1.61
NUP2	YLR335W	HXK1	P04806	485 aa	Known RBP	4.99	□□□□□ -1.61
NUP2	YLR335W	RNA1	P11745	407 aa	Known RBP	4.99	□□□□□ -1.61
NUP2	YLR335W	SPB4	P25808	606 aa	Predicted RBP	4.99	□□□□□ -1.61
NUP2	YLR335W	CLB5	P30283	435 aa		4.99	□□□□□ -1.61
NUP2	YLR335W	MET1	P36150	593 aa		4.99	□□□□□ -1.61
NUP2	YLR335W	ADE17	P38009	592 aa	Known RBP	4.99	□□□□□ -1.61
NUP2	YLR335W	NDC80	P40460	691 aa		4.99	□□□□□ -1.61
NUP2	YLR335W	APT1	P49435	187 aa	Known RBP	4.99	□□□□□ -1.61
NUP2	YLR335W	SPN1	Q06505	410 aa	Predicted RBP	4.99	□□□□□ -1.61
NUP2	YLR335W	TAH18	Q12181	623 aa		4.99	□□□□□ -1.61
NUP2	YLR335W	PGA3	Q12746	312 aa	Known RBP	4.99	□□□□□ -1.61
NUP2	YLR335W	YOL087C	Q99247	1116 aa		4.99	□□□□□ -1.61
NUP2	YLR335W	SAC3	P46674	1301 aa		4.99	□□□□□ -1.61
NUP2	YLR335W	SEC18	P18759	758 aa	Known RBP	4.98	□□□□□ -1.61
NUP2	YLR335W	UBC1	P21734	215 aa	Known RBP	4.98	□□□□□ -1.61
NUP2	YLR335W	NFU1	P32860	256 aa		4.98	□□□□□ -1.61
NUP2	YLR335W	CCT4	P39078	528 aa	Known RBP	4.98	□□□□□ -1.61
NUP2	YLR335W	CUE3	P53137	624 aa	Known RBP	4.98	□□□□□ -1.61
NUP2	YLR335W	ADE16	P54113	591 aa	Known RBP	4.98	□□□□□ -1.61
NUP2	YLR335W	RBA50	Q04418	439 aa		4.98	□□□□□ -1.61
NUP2	YLR335W	GFD1	Q04839	188 aa	Known RBP	4.98	□□□□□ -1.61
NUP2	YLR335W	VPS38	Q05919	439 aa		4.98	□□□□□ -1.61
NUP2	YLR335W	AI2	P03876	854 aa		4.98	□□□□□ -1.61
NUP2	YLR335W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.98	□□□□□ -1.61	not detected
NUP2	YLR335W	RPO26	P20435	155 aa		4.98	□□□□□ -1.61
NUP2	YLR335W	BMH1	P29311	267 aa	Known RBP	4.98	□□□□□ -1.61
NUP2	YLR335W	IMP2'	P32351	346 aa		4.98	□□□□□ -1.61
NUP2	YLR335W	PXL1	P36166	706 aa		4.98	□□□□□ -1.61
NUP2	YLR335W	EFM2	P38347	419 aa		4.98	□□□□□ -1.61
NUP2	YLR335W	YGL082W	P53155	381 aa		4.98	□□□□□ -1.61
NUP2	YLR335W	PKH3	Q03306	898 aa	Predicted RBP	4.98	□□□□□ -1.61
NUP2	YLR335W	VMS1	Q04311	632 aa	Known RBP	4.98	□□□□□ -1.61
NUP2	YLR335W	HSP82	P02829	709 aa	Known RBP	4.97	□□□□□ -1.61
NUP2	YLR335W	MCM3	P24279	971 aa	Known RBP	4.97	□□□□□ -1.61
NUP2	YLR335W	CDC15	P27636	974 aa		4.97	□□□□□ -1.61
NUP2	YLR335W	BMH2	P34730	273 aa	Known RBP	4.97	□□□□□ -1.61
NUP2	YLR335W	APL2	P36000	726 aa	Predicted RBP	4.97	□□□□□ -1.61
NUP2	YLR335W	MUD2	P36084	527 aa	Known RBP	4.97	□□□□□ -1.61
NUP2	YLR335W	GEF1	P37020	779 aa		4.97	□□□□□ -1.61
NUP2	YLR335W	PSY4	P38193	441 aa		4.97	□□□□□ -1.61
NUP2	YLR335W	BUD16	P39988	312 aa		4.97	□□□□□ -1.61
NUP2	YLR335W	STR2	P47164	639 aa		4.97	□□□□□ -1.61
NUP2	YLR335W	SRC1	Q03707	834 aa		4.97	□□□□□ -1.61
NUP2	YLR335W	EST2	Q06163	884 aa		4.97	□□□□□ -1.61
NUP2	YLR335W	TLG2	Q08144	397 aa		4.97	□□□□□ -1.61
NUP2	YLR335W	MCM16	Q12262	181 aa		4.97	□□□□□ -1.61
NUP2	YLR335W	SEC23	P15303	768 aa	Known RBP	4.97	□□□□□ -1.61
NUP2	YLR335W	RGP1	P16664	663 aa		4.97	□□□□□ -1.61
NUP2	YLR335W	BYE1	P36106	594 aa		4.97	□□□□□ -1.61
NUP2	YLR335W	VPS8	P39702	1274 aa		4.97	□□□□□ -1.61
NUP2	YLR335W	DSN1	P40568	576 aa		4.97	□□□□□ -1.61
NUP2	YLR335W	MSH4	P40965	878 aa	Predicted RBP	4.97	□□□□□ -1.61
NUP2	YLR335W	HXT10	P43581	546 aa		4.97	□□□□□ -1.61
NUP2	YLR335W	OSW7	P43611	510 aa		4.97	□□□□□ -1.61
NUP2	YLR335W	FYV8	P46949	817 aa	Known RBP	4.97	□□□□□ -1.61
NUP2	YLR335W	YGL140C	P53120	1219 aa		4.97	□□□□□ -1.61
NUP2	YLR335W	APL4	Q12028	832 aa		4.97	□□□□□ -1.61
NUP2	YLR335W	ADR1	P07248	1323 aa		4.96	□□□□□ -1.61
NUP2	YLR335W	PDC1	P06169	563 aa	Known RBP	4.96	□□□□□ -1.62
NUP2	YLR335W	ARG8	P18544	423 aa		4.96	□□□□□ -1.62
NUP2	YLR335W	GRX1	P25373	110 aa	Known RBP	4.96	□□□□□ -1.62
NUP2	YLR335W	SLX5	P32828	619 aa	Known RBP	4.96	□□□□□ -1.62
NUP2	YLR335W	PCH2	P38126	564 aa		4.96	□□□□□ -1.62
NUP2	YLR335W	REI1	P38344	393 aa	Predicted RBP	4.96	□□□□□ -1.62
NUP2	YLR335W	CAF130	P53280	1122 aa	Predicted RBP	4.96	□□□□□ -1.62
NUP2	YLR335W	ALD3	P54114	506 aa		4.96	□□□□□ -1.62
NUP2	YLR335W	OMS1	Q06668	471 aa		4.96	□□□□□ -1.62
NUP2	YLR335W	OSH2	Q12451	1283 aa		4.96	□□□□□ -1.62
NUP2	YLR335W	LAM4	P38800	1345 aa		4.96	□□□□□ -1.62
NUP2	YLR335W	MCM4	P30665	933 aa	Known RBP	4.95	□□□□□ -1.62
NUP2	YLR335W	RPN10	P38886	268 aa	Known RBP	4.95	□□□□□ -1.62
NUP2	YLR335W	IES2	P40154	320 aa		4.95	□□□□□ -1.62
NUP2	YLR335W	VTC3	Q02725	835 aa		4.95	□□□□□ -1.62
NUP2	YLR335W	RPN7	Q06103	429 aa	Known RBP	4.95	□□□□□ -1.62
NUP2	YLR335W	SSA2	P10592	639 aa	Known RBP	4.95	□□□□□ -1.62
NUP2	YLR335W	CNS1	P33313	385 aa		4.95	□□□□□ -1.62
NUP2	YLR335W	RER2	P35196	286 aa		4.95	□□□□□ -1.62
NUP2	YLR335W	YKL133C	P36066	463 aa		4.95	□□□□□ -1.62
NUP2	YLR335W	PXA1	P41909	870 aa		4.95	□□□□□ -1.62
NUP2	YLR335W	YNL193W	P53870	558 aa		4.95	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 85.9 ms