RNA–Protein interactions for RNA: YLR047C

FRE8, Transcript of Protein with sequence similarity to iron/copper reductases, yeast

Gene FRE8, Length 2,061 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FRE8	YLR047C	RPS26B	P39939	119 aa	Known RBP	4.27	□□□□□ -1.73
FRE8	YLR047C	UFD2	P54860	961 aa		4.27	□□□□□ -1.73
FRE8	YLR047C	TOS4	Q06266	489 aa		4.27	□□□□□ -1.73
FRE8	YLR047C	BDS1	Q08347	646 aa		4.27	□□□□□ -1.73
FRE8	YLR047C	HXT5	P38695	592 aa		4.26	□□□□□ -1.73
FRE8	YLR047C	MAD1	P40957	749 aa		4.26	□□□□□ -1.73
FRE8	YLR047C	IOC3	P43596	787 aa		4.26	□□□□□ -1.73
FRE8	YLR047C	RNH70	P53331	553 aa		4.26	□□□□□ -1.73
FRE8	YLR047C	PIN2	Q12057	282 aa		4.26	□□□□□ -1.73
FRE8	YLR047C	IML1	P47170	1584 aa		4.26	□□□□□ -1.73
FRE8	YLR047C	SRB8	P25648	1427 aa		4.26	□□□□□ -1.73
FRE8	YLR047C	TY1B-NL2	Q99337	1749 aa	Known RBP	4.26	□□□□□ -1.73
FRE8	YLR047C	DAT1	P13483	248 aa	Known RBP	4.26	□□□□□ -1.73
FRE8	YLR047C	FBP26	P32604	452 aa		4.26	□□□□□ -1.73
FRE8	YLR047C	PEP7	P32609	515 aa		4.26	□□□□□ -1.73
FRE8	YLR047C	YAF9	P53930	226 aa		4.26	□□□□□ -1.73
FRE8	YLR047C	NMD2	P38798	1089 aa	Known RBP	4.25	□□□□□ -1.73
FRE8	YLR047C	FAR11	P53917	953 aa		4.25	□□□□□ -1.73
FRE8	YLR047C	NUP188	P52593	1655 aa	Known RBP	4.25	□□□□□ -1.73
FRE8	YLR047C	MRPL33	P20084	86 aa		4.25	□□□□□ -1.73
FRE8	YLR047C	BCK2	P33306	851 aa		4.25	□□□□□ -1.73
FRE8	YLR047C	YNL011C	P53980	444 aa		4.25	□□□□□ -1.73
FRE8	YLR047C	CDC55	Q00362	526 aa		4.25	□□□□□ -1.73
FRE8	YLR047C	MRF1	P30775	413 aa	Predicted RBP	4.24	□□□□□ -1.73
FRE8	YLR047C	GCD6	P32501	712 aa	Known RBP	4.24	□□□□□ -1.73
FRE8	YLR047C	SRP40	P32583	406 aa	Predicted RBP	4.24	□□□□□ -1.73
FRE8	YLR047C	MKS1	P34072	584 aa		4.24	□□□□□ -1.73
FRE8	YLR047C	MTO1	P53070	669 aa		4.24	□□□□□ -1.73
FRE8	YLR047C	YPQ2	Q06328	317 aa		4.24	□□□□□ -1.73
FRE8	YLR047C	SSF2	Q12153	453 aa	Predicted RBP	4.24	□□□□□ -1.73
FRE8	YLR047C	WTM2	Q12206	467 aa		4.24	□□□□□ -1.73
FRE8	YLR047C	CIT2	P08679	460 aa		4.23	□□□□□ -1.73
FRE8	YLR047C	CYC8	P14922	966 aa		4.23	□□□□□ -1.73
FRE8	YLR047C	VPS35	P34110	944 aa		4.23	□□□□□ -1.73
FRE8	YLR047C	TBS1	P38114	1094 aa		4.23	□□□□□ -1.73
FRE8	YLR047C	BDP1	P46678	594 aa		4.23	□□□□□ -1.73
FRE8	YLR047C	SYH1	Q02875	849 aa	Known RBP	4.23	□□□□□ -1.73
FRE8	YLR047C	VMR1	P38735	1592 aa		4.23	□□□□□ -1.73
FRE8	YLR047C	STE6	P12866	1290 aa		4.23	□□□□□ -1.73
FRE8	YLR047C	UTP7	P40055	554 aa	Known RBP	4.23	□□□□□ -1.73
FRE8	YLR047C	YGR122W	P53272	402 aa		4.23	□□□□□ -1.73
FRE8	YLR047C	RMD1	Q03441	430 aa		4.23	□□□□□ -1.73
FRE8	YLR047C	VMA3	P25515	160 aa		4.22	□□□□□ -1.73
FRE8	YLR047C	YKL091C	P33324	310 aa	Known RBP	4.22	□□□□□ -1.73
FRE8	YLR047C	TYS1	P36421	394 aa	Known RBP	4.22	□□□□□ -1.73
FRE8	YLR047C	FAA3	P39002	694 aa		4.22	□□□□□ -1.73
FRE8	YLR047C	XDJ1	P39102	459 aa		4.22	□□□□□ -1.73
FRE8	YLR047C	DFG5	Q05031	458 aa		4.22	□□□□□ -1.73
FRE8	YLR047C	CLN2	P20438	545 aa		4.22	□□□□□ -1.73
FRE8	YLR047C	PPG1	P32838	368 aa		4.22	□□□□□ -1.73
FRE8	YLR047C	HXT8	P40886	569 aa		4.22	□□□□□ -1.73
FRE8	YLR047C	SAM37	P50110	327 aa		4.22	□□□□□ -1.73
FRE8	YLR047C	ESF1	Q06344	628 aa	Known RBP	4.22	□□□□□ -1.73
FRE8	YLR047C	BUD21	Q08492	214 aa	Predicted RBP	4.22	□□□□□ -1.73
FRE8	YLR047C	WRS1	Q12109	432 aa	Known RBP	4.22	□□□□□ -1.73
FRE8	YLR047C	HXK1	P04806	485 aa	Known RBP	4.21	□□□□□ -1.74
FRE8	YLR047C	RAD2	P07276	1031 aa		4.21	□□□□□ -1.74
FRE8	YLR047C	PET112	P33893	541 aa		4.21	□□□□□ -1.74
FRE8	YLR047C	RSC4	Q02206	625 aa		4.21	□□□□□ -1.74
FRE8	YLR047C	NOC3	Q07896	663 aa	Predicted RBP	4.21	□□□□□ -1.74
FRE8	YLR047C	MCM1	P11746	286 aa		4.2	□□□□□ -1.74
FRE8	YLR047C	YBL086C	P38177	466 aa		4.2	□□□□□ -1.74
FRE8	YLR047C	YNL165W	P53891	406 aa		4.2	□□□□□ -1.74
FRE8	YLR047C	FRK1	Q03002	865 aa	Predicted RBP	4.2	□□□□□ -1.74
FRE8	YLR047C	NSE3	Q05541	303 aa		4.2	□□□□□ -1.74
FRE8	YLR047C	OXR1	Q08952	273 aa		4.2	□□□□□ -1.74
FRE8	YLR047C	SMC1	P32908	1225 aa		4.2	□□□□□ -1.74
FRE8	YLR047C	MRT4	P33201	236 aa	Known RBP	4.2	□□□□□ -1.74
FRE8	YLR047C	SCD5	P34758	872 aa		4.2	□□□□□ -1.74
FRE8	YLR047C	SUM1	P46676	1062 aa		4.2	□□□□□ -1.74
FRE8	YLR047C	BSC2	Q05611	235 aa		4.2	□□□□□ -1.74
FRE8	YLR047C	ALG12	P53730	551 aa		4.19	□□□□□ -1.74
FRE8	YLR047C	CWC24	P53769	259 aa		4.19	□□□□□ -1.74
FRE8	YLR047C	RPN4	Q03465	531 aa		4.19	□□□□□ -1.74
FRE8	YLR047C	INP54	Q08227	384 aa	Known RBP	4.19	□□□□□ -1.74
FRE8	YLR047C	Q0182	Q9ZZW1	134 aa		4.19	□□□□□ -1.74
FRE8	YLR047C	MNR2	P35724	969 aa		4.18	□□□□□ -1.74
FRE8	YLR047C	CIC1	P38779	376 aa	Known RBP	4.18	□□□□□ -1.74
FRE8	YLR047C	RAD55	P38953	406 aa		4.18	□□□□□ -1.74
FRE8	YLR047C	TAT2	P38967	592 aa		4.18	□□□□□ -1.74
FRE8	YLR047C	BUD6	P41697	788 aa		4.18	□□□□□ -1.74
FRE8	YLR047C	RGD2	P43556	714 aa		4.18	□□□□□ -1.74
FRE8	YLR047C	DAL4	Q04895	635 aa		4.18	□□□□□ -1.74
FRE8	YLR047C	CDC53	Q12018	815 aa	Known RBP	4.18	□□□□□ -1.74
FRE8	YLR047C	PDR5	P33302	1511 aa	Known RBP	4.18	□□□□□ -1.74
FRE8	YLR047C	BDF2	Q07442	638 aa		4.18	□□□□□ -1.74
FRE8	YLR047C	TIF6	Q12522	245 aa	Known RBP	4.18	□□□□□ -1.74
FRE8	YLR047C	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
FRE8	YLR047C	MSN1	P22148	382 aa		4.17	□□□□□ -1.74
FRE8	YLR047C	AMS1	P22855	1083 aa		4.17	□□□□□ -1.74
FRE8	YLR047C	GRX1	P25373	110 aa	Known RBP	4.17	□□□□□ -1.74
FRE8	YLR047C	MLF3	P32047	452 aa		4.17	□□□□□ -1.74
FRE8	YLR047C	UGA4	P32837	571 aa		4.17	□□□□□ -1.74
FRE8	YLR047C	LDH1	P38139	375 aa		4.17	□□□□□ -1.74
FRE8	YLR047C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
FRE8	YLR047C	YJL049W	P47048	450 aa		4.17	□□□□□ -1.74
FRE8	YLR047C	QDR2	P40474	542 aa		4.17	□□□□□ -1.74
FRE8	YLR047C	FAA4	P47912	694 aa	Known RBP	4.17	□□□□□ -1.74
FRE8	YLR047C	PRE9	P23638	258 aa	Known RBP	4.16	□□□□□ -1.74
FRE8	YLR047C	YHL008C	P38750	627 aa		4.16	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 22.6 ms