RNA–Protein interactions for RNA: YKR017C

HEL1, Transcript of RING finger ubiquitin ligase (E3), yeastyeast

Gene HEL1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HEL1YKR017C NNT1Q05874 261 aa7.7□□□□□ -1.18
HEL1YKR017C YPL191CQ08930 360 aa7.7□□□□□ -1.18
HEL1YKR017C RIO1Q12196 484 aaKnown RBP7.7□□□□□ -1.18
HEL1YKR017C SPA2P23201 1466 aaKnown RBP7.69□□□□□ -1.18
HEL1YKR017C LEU1P07264 779 aaKnown RBP7.69□□□□□ -1.18
HEL1YKR017C CAJ1P39101 391 aa7.69□□□□□ -1.18
HEL1YKR017C GCD10P41814 478 aa7.69□□□□□ -1.18
HEL1YKR017C ALG12P53730 551 aa7.69□□□□□ -1.18
HEL1YKR017C ISW2Q08773 1120 aa7.69□□□□□ -1.18
HEL1YKR017C VPH1P32563 840 aaKnown RBP7.68□□□□□ -1.18
HEL1YKR017C UBP14P38237 781 aaKnown RBP7.68□□□□□ -1.18
HEL1YKR017C ZDS2P54786 942 aa7.68□□□□□ -1.18
HEL1YKR017C FUS2Q05670 677 aa7.68□□□□□ -1.18
HEL1YKR017C DPS1P04802 557 aaKnown RBP7.67□□□□□ -1.18
HEL1YKR017C RPB2P08518 1224 aaKnown RBP7.67□□□□□ -1.18
HEL1YKR017C POL4P25615 582 aa7.67□□□□□ -1.18
HEL1YKR017C SWC3P31376 625 aa7.67□□□□□ -1.18
HEL1YKR017C TPD3P31383 635 aa7.67□□□□□ -1.18
HEL1YKR017C CCL1P37366 393 aa7.67□□□□□ -1.18
HEL1YKR017C SPC72P39723 622 aa7.67□□□□□ -1.18
HEL1YKR017C YRB1P41920 201 aaKnown RBP7.67□□□□□ -1.18
HEL1YKR017C SHE10P53075 577 aa7.67□□□□□ -1.18
HEL1YKR017C HOL1P53389 586 aa7.67□□□□□ -1.18
HEL1YKR017C RTC1Q08281 1341 aa7.67□□□□□ -1.18
HEL1YKR017C PAP1P29468 568 aaKnown RBP7.67□□□□□ -1.18
HEL1YKR017C STO1P34160 861 aaKnown RBP7.67□□□□□ -1.18
HEL1YKR017C STN1P38960 494 aa7.67□□□□□ -1.18
HEL1YKR017C FMP10P40098 244 aa7.67□□□□□ -1.18
HEL1YKR017C ALG2P43636 503 aa7.67□□□□□ -1.18
HEL1YKR017C SRB7P47822 140 aa7.67□□□□□ -1.18
HEL1YKR017C HPC2Q01448 625 aa7.67□□□□□ -1.18
HEL1YKR017C VMS1Q04311 632 aaKnown RBP7.67□□□□□ -1.18
HEL1YKR017C POB3Q04636 552 aaKnown RBP7.67□□□□□ -1.18
HEL1YKR017C YLR352WQ06479 807 aa7.67□□□□□ -1.18
HEL1YKR017C VIP1Q06685 1146 aaKnown RBP7.67□□□□□ -1.18
HEL1YKR017C ENT1Q12518 454 aa7.67□□□□□ -1.18
HEL1YKR017C PGS1P25578 521 aa7.66□□□□□ -1.18
HEL1YKR017C APL2P36000 726 aaPredicted RBP7.66□□□□□ -1.18
HEL1YKR017C MRPL40P36534 297 aa7.66□□□□□ -1.18
HEL1YKR017C YBL028CP38202 106 aa7.66□□□□□ -1.18
HEL1YKR017C INP52P50942 1183 aa7.66□□□□□ -1.18
HEL1YKR017C LSC1P53598 329 aaKnown RBP7.66□□□□□ -1.18
HEL1YKR017C AOS1Q06624 347 aa7.66□□□□□ -1.18
HEL1YKR017C GIC2Q06648 383 aa7.66□□□□□ -1.18
HEL1YKR017C SWI1P09547 1314 aa7.65□□□□□ -1.18
HEL1YKR017C PSE1P32337 1089 aaKnown RBP7.65□□□□□ -1.18
HEL1YKR017C PTR2P32901 601 aa7.65□□□□□ -1.18
HEL1YKR017C JNM1P36224 373 aa7.65□□□□□ -1.18
HEL1YKR017C OLA1P38219 394 aaKnown RBP7.65□□□□□ -1.18
HEL1YKR017C SLX1P38324 304 aa7.65□□□□□ -1.18
HEL1YKR017C SLN1P39928 1220 aaPredicted RBP7.65□□□□□ -1.18
HEL1YKR017C GTT3P39996 337 aa7.65□□□□□ -1.18
HEL1YKR017C TMN3P40071 706 aa7.65□□□□□ -1.18
HEL1YKR017C DCP2P53550 970 aaKnown RBP7.65□□□□□ -1.18
HEL1YKR017C VPS60Q03390 229 aa7.65□□□□□ -1.18
HEL1YKR017C ECM11Q04110 302 aa7.65□□□□□ -1.18
HEL1YKR017C SVF1Q05515 481 aa7.65□□□□□ -1.18
HEL1YKR017C MDM36Q06820 579 aa7.65□□□□□ -1.18
HEL1YKR017C RPC31P17890 251 aa7.64□□□□□ -1.19
HEL1YKR017C REB1P21538 810 aa7.64□□□□□ -1.19
HEL1YKR017C DAL80P26343 269 aa7.64□□□□□ -1.19
HEL1YKR017C CDC60P26637 1090 aaKnown RBP7.64□□□□□ -1.19
HEL1YKR017C TAF5P38129 798 aa7.64□□□□□ -1.19
HEL1YKR017C YAP1801P38856 637 aa7.64□□□□□ -1.19
HEL1YKR017C LAP3Q01532 483 aaKnown RBP RIP-Chip data7.64□□□□□ -1.19not detected
HEL1YKR017C TFB3Q03290 321 aa7.64□□□□□ -1.19
HEL1YKR017C DNL4Q08387 944 aaPredicted RBP7.64□□□□□ -1.19
HEL1YKR017C NOB1Q08444 459 aaKnown RBP7.64□□□□□ -1.19
HEL1YKR017C RED1P14291 827 aa7.63□□□□□ -1.19
HEL1YKR017C DIT1P21623 536 aa7.63□□□□□ -1.19
HEL1YKR017C MCM3P24279 971 aaKnown RBP7.63□□□□□ -1.19
HEL1YKR017C URA1P28272 314 aaPredicted RBP7.63□□□□□ -1.19
HEL1YKR017C RRF1P38771 230 aa7.63□□□□□ -1.19
HEL1YKR017C CWH41P53008 833 aa7.63□□□□□ -1.19
HEL1YKR017C UBP3Q01477 912 aaKnown RBP RIP-Chip data7.63□□□□□ -1.19 RIP-Chip
HEL1YKR017C ADA2Q02336 434 aa7.63□□□□□ -1.19
HEL1YKR017C YPL277CQ08989 487 aa7.63□□□□□ -1.19
HEL1YKR017C RRI2Q12348 645 aa7.63□□□□□ -1.19
HEL1YKR017C RTP1Q12751 981 aa7.63□□□□□ -1.19
HEL1YKR017C HEM1P09950 548 aaPredicted RBP7.63□□□□□ -1.19
HEL1YKR017C KIP2P28743 706 aa7.63□□□□□ -1.19
HEL1YKR017C RME1P32338 300 aaKnown RBP7.63□□□□□ -1.19
HEL1YKR017C SEC8P32855 1065 aa7.63□□□□□ -1.19
HEL1YKR017C UIP5P36137 443 aa7.63□□□□□ -1.19
HEL1YKR017C TIF5P38431 405 aaKnown RBP7.63□□□□□ -1.19
HEL1YKR017C GUA1P38625 525 aaKnown RBP7.63□□□□□ -1.19
HEL1YKR017C CIN4P39110 191 aa7.63□□□□□ -1.19
HEL1YKR017C VTC2P43585 828 aa7.63□□□□□ -1.19
HEL1YKR017C ATP22P50273 684 aaPredicted RBP7.63□□□□□ -1.19
HEL1YKR017C RTC5Q12108 567 aaKnown RBP7.63□□□□□ -1.19
HEL1YKR017C INH1P01097 85 aa7.62□□□□□ -1.19
HEL1YKR017C CIT2P08679 460 aa7.62□□□□□ -1.19
HEL1YKR017C MPH2P0CD99 609 aa7.62□□□□□ -1.19
HEL1YKR017C CDC48P25694 835 aaKnown RBP7.62□□□□□ -1.19
HEL1YKR017C SLA1P32790 1244 aa7.62□□□□□ -1.19
HEL1YKR017C YKL100CP34248 587 aa7.62□□□□□ -1.19
HEL1YKR017C HSM3P38348 480 aa7.62□□□□□ -1.19
HEL1YKR017C SDA1P53313 767 aaKnown RBP7.62□□□□□ -1.19
HEL1YKR017C ADE13Q05911 482 aaKnown RBP7.62□□□□□ -1.19
HEL1YKR017C RKM1Q08961 583 aaPredicted RBP7.62□□□□□ -1.19
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms