RNA–Protein interactions for RNA: YJL179W

PFD1, Transcript of Subunit of heterohexameric prefoldin, yeastyeast

Gene PFD1, Length 330 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PFD1YJL179W ELG1Q12050 791 aa4.17□□□□□ -1.74
PFD1YJL179W MSH6Q03834 1242 aa4.16□□□□□ -1.74
PFD1YJL179W YOR059CQ08448 450 aaKnown RBP4.16□□□□□ -1.74
PFD1YJL179W YPT53P36019 220 aa4.15□□□□□ -1.75
PFD1YJL179W BSD2P38356 321 aa4.15□□□□□ -1.75
PFD1YJL179W YIL165CP40446 119 aa4.15□□□□□ -1.75
PFD1YJL179W BIO5P53744 561 aaKnown RBP4.15□□□□□ -1.75
PFD1YJL179W VMA3P25515 160 aa4.14□□□□□ -1.75
PFD1YJL179W PEP12P32854 288 aa4.14□□□□□ -1.75
PFD1YJL179W ISW1P38144 1129 aa4.14□□□□□ -1.75
PFD1YJL179W KIP3P53086 805 aaKnown RBP4.14□□□□□ -1.75
PFD1YJL179W ENO1P00924 437 aaKnown RBP4.13□□□□□ -1.75
PFD1YJL179W CWH41P53008 833 aa4.13□□□□□ -1.75
PFD1YJL179W ERS1P17261 260 aa4.12□□□□□ -1.75
PFD1YJL179W MRPL33P20084 86 aa4.12□□□□□ -1.75
PFD1YJL179W WHI3P34761 661 aaKnown RBP4.12□□□□□ -1.75
PFD1YJL179W LDH1P38139 375 aa4.12□□□□□ -1.75
PFD1YJL179W ORC3P54790 616 aa4.12□□□□□ -1.75
PFD1YJL179W NFS1P25374 497 aa4.11□□□□□ -1.75
PFD1YJL179W RCM1P53972 490 aa4.11□□□□□ -1.75
PFD1YJL179W TFA2P36145 328 aa4.1□□□□□ -1.75
PFD1YJL179W FAR11P53917 953 aa4.1□□□□□ -1.75
PFD1YJL179W CAB1Q04430 367 aa4.1□□□□□ -1.75
PFD1YJL179W VAN1P23642 535 aa4.09□□□□□ -1.75
PFD1YJL179W ADP1P25371 1049 aa4.09□□□□□ -1.75
PFD1YJL179W YBR287WP38355 427 aa4.09□□□□□ -1.75
PFD1YJL179W ALD3P54114 506 aa4.09□□□□□ -1.75
PFD1YJL179W YOR223WQ12015 292 aa4.09□□□□□ -1.75
PFD1YJL179W FUS1P11710 512 aa4.08□□□□□ -1.76
PFD1YJL179W BOI1P38041 980 aaKnown RBP4.08□□□□□ -1.76
PFD1YJL179W NEO1P40527 1151 aa4.08□□□□□ -1.76
PFD1YJL179W OYE3P41816 400 aaPredicted RBP4.08□□□□□ -1.76
PFD1YJL179W ABZ1P37254 787 aaPredicted RBP4.07□□□□□ -1.76
PFD1YJL179W AIM3P38266 947 aaKnown RBP4.07□□□□□ -1.76
PFD1YJL179W YJL007CP47080 104 aa4.07□□□□□ -1.76
PFD1YJL179W RIM8P53179 542 aa4.07□□□□□ -1.76
PFD1YJL179W ROM1P53046 1155 aa4.06□□□□□ -1.76
PFD1YJL179W TRS33Q99394 268 aa4.06□□□□□ -1.76
PFD1YJL179W KTR7P40504 517 aa4.05□□□□□ -1.76
PFD1YJL179W EMG1Q06287 252 aaKnown RBP4.05□□□□□ -1.76
PFD1YJL179W PNS1Q12412 539 aa4.05□□□□□ -1.76
PFD1YJL179W MSN1P22148 382 aa4.04□□□□□ -1.76
PFD1YJL179W RTG2P32608 588 aaKnown RBP4.04□□□□□ -1.76
PFD1YJL179W GPT2P36148 743 aa4.04□□□□□ -1.76
PFD1YJL179W FOX2Q02207 900 aaKnown RBP4.04□□□□□ -1.76
PFD1YJL179W HAS1Q03532 505 aaKnown RBP4.03□□□□□ -1.76
PFD1YJL179W TUB2P02557 457 aaKnown RBP4.02□□□□□ -1.77
PFD1YJL179W YJR124CP47159 448 aa4.02□□□□□ -1.77
PFD1YJL179W MRPL22P53881 309 aa4.02□□□□□ -1.77
PFD1YJL179W YMR074CQ04773 145 aa4.02□□□□□ -1.77
PFD1YJL179W TIF1P10081 395 aaKnown RBP4.01□□□□□ -1.77
PFD1YJL179W SUV3P32580 737 aa4.01□□□□□ -1.77
PFD1YJL179W RPN1P38764 993 aaKnown RBP4.01□□□□□ -1.77
PFD1YJL179W AIM46P38885 310 aa4.01□□□□□ -1.77
PFD1YJL179W SSY1Q03770 852 aa4.01□□□□□ -1.77
PFD1YJL179W YLL054CQ12244 843 aa4.01□□□□□ -1.77
PFD1YJL179W SOD2P00447 233 aa4□□□□□ -1.77
PFD1YJL179W GAL2P13181 574 aa4□□□□□ -1.77
PFD1YJL179W YBR197CP38306 217 aa4□□□□□ -1.77
PFD1YJL179W FIR1P40020 876 aa4□□□□□ -1.77
PFD1YJL179W TRE1Q08919 783 aa4□□□□□ -1.77
PFD1YJL179W LPX1Q12405 387 aaKnown RBP4□□□□□ -1.77
PFD1YJL179W HVG1P0CE11 249 aa3.99□□□□□ -1.77
PFD1YJL179W TOD6P34219 525 aa3.99□□□□□ -1.77
PFD1YJL179W RPL34BP40525 121 aaKnown RBP3.99□□□□□ -1.77
PFD1YJL179W DOT1Q04089 582 aaKnown RBP3.99□□□□□ -1.77
PFD1YJL179W SIS2P36024 562 aa3.98□□□□□ -1.77
PFD1YJL179W FET4P40988 552 aa3.98□□□□□ -1.77
PFD1YJL179W RPS4AP0CX35 261 aaKnown RBP3.97□□□□□ -1.77
PFD1YJL179W RPS4BP0CX36 261 aaKnown RBP3.97□□□□□ -1.77
PFD1YJL179W CLU1Q03690 1277 aaKnown RBP3.97□□□□□ -1.77
PFD1YJL179W LEU3P08638 886 aa3.96□□□□□ -1.78
PFD1YJL179W PRO1P32264 428 aa3.96□□□□□ -1.78
PFD1YJL179W SHM2P37291 469 aaKnown RBP3.96□□□□□ -1.78
PFD1YJL179W BIM1P40013 344 aa3.96□□□□□ -1.78
PFD1YJL179W ATG32P40458 529 aa3.96□□□□□ -1.78
PFD1YJL179W YML122CQ03207 126 aa3.96□□□□□ -1.78
PFD1YJL179W GLO4Q12320 285 aa3.96□□□□□ -1.78
PFD1YJL179W PEX7P39108 375 aa3.95□□□□□ -1.78
PFD1YJL179W YLR358CO13565 187 aa3.94□□□□□ -1.78
PFD1YJL179W CTS1P29029 562 aa3.94□□□□□ -1.78
PFD1YJL179W ISC10P32645 267 aa3.94□□□□□ -1.78
PFD1YJL179W ALT1P52893 592 aa3.94□□□□□ -1.78
PFD1YJL179W YPL277CQ08989 487 aa3.94□□□□□ -1.78
PFD1YJL179W YDL177CQ12257 170 aa3.94□□□□□ -1.78
PFD1YJL179W HXT8P40886 569 aa3.93□□□□□ -1.78
PFD1YJL179W GCV1P48015 400 aa3.93□□□□□ -1.78
PFD1YJL179W RPS13P05756 151 aaKnown RBP3.92□□□□□ -1.78
PFD1YJL179W YVC1Q12324 675 aa3.92□□□□□ -1.78
PFD1YJL179W MSH4P40965 878 aaPredicted RBP3.91□□□□□ -1.78
PFD1YJL179W PTC7P38797 343 aa3.9□□□□□ -1.79
PFD1YJL179W RGD2P43556 714 aa3.9□□□□□ -1.79
PFD1YJL179W ALD4P46367 519 aaKnown RBP3.9□□□□□ -1.79
PFD1YJL179W PRE10P21242 288 aaKnown RBP RIP-Chip data3.89□□□□□ -1.79not detected
PFD1YJL179W ETP1P38748 585 aaKnown RBP3.89□□□□□ -1.79
PFD1YJL179W NTA1P40354 457 aa3.89□□□□□ -1.79
PFD1YJL179W SNO2P53823 222 aa3.89□□□□□ -1.79
PFD1YJL179W EAR1Q03212 550 aa3.89□□□□□ -1.79
PFD1YJL179W YIG1Q08956 461 aa3.88□□□□□ -1.79
PFD1YJL179W PUS9Q12069 462 aa3.87□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 63.3 ms