RNA–Protein interactions for RNA: YJL100W

LSB6, Transcript of Type II phosphatidylinositol 4-kinase, yeastyeast

Gene LSB6, Length 1,824 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSB6YJL100W SRC1Q03707 834 aa10.26□□□□□ -0.77
LSB6YJL100W OPI1P21957 404 aa10.25□□□□□ -0.77
LSB6YJL100W MCM4P30665 933 aaKnown RBP10.25□□□□□ -0.77
LSB6YJL100W OSH3P38713 996 aaKnown RBP10.25□□□□□ -0.77
LSB6YJL100W MSN5P52918 1224 aa10.25□□□□□ -0.77
LSB6YJL100W PFF1P38244 976 aa10.24□□□□□ -0.77
LSB6YJL100W PKH3Q03306 898 aaPredicted RBP10.24□□□□□ -0.77
LSB6YJL100W PSY4P38193 441 aa10.23□□□□□ -0.77
LSB6YJL100W RAD26P40352 1085 aa10.23□□□□□ -0.77
LSB6YJL100W JSN1P47135 1091 aaKnown RBP RIP-Chip data10.23□□□□□ -0.77not detected
LSB6YJL100W YKL222CP35995 705 aa10.23□□□□□ -0.77
LSB6YJL100W SYF1Q04048 859 aaPredicted RBP10.23□□□□□ -0.77
LSB6YJL100W HSP82P02829 709 aaKnown RBP10.22□□□□□ -0.77
LSB6YJL100W APL4Q12028 832 aa10.22□□□□□ -0.77
LSB6YJL100W SAC3P46674 1301 aa10.22□□□□□ -0.77
LSB6YJL100W FAS2P19097 1887 aaKnown RBP10.21□□□□□ -0.77
LSB6YJL100W RFT1P38206 574 aaPredicted RBP10.21□□□□□ -0.77
LSB6YJL100W HCA4P20448 770 aaKnown RBP10.21□□□□□ -0.78
LSB6YJL100W SIT4P20604 311 aa10.21□□□□□ -0.78
LSB6YJL100W CDC15P27636 974 aa10.21□□□□□ -0.78
LSB6YJL100W EAF6P47128 113 aa10.21□□□□□ -0.78
LSB6YJL100W PRP31P49704 494 aaPredicted RBP10.21□□□□□ -0.78
LSB6YJL100W RRI2Q12348 645 aa10.21□□□□□ -0.78
LSB6YJL100W CTT1P06115 562 aa10.2□□□□□ -0.78
LSB6YJL100W RGP1P16664 663 aa10.2□□□□□ -0.78
LSB6YJL100W FRD1P32614 470 aaKnown RBP10.2□□□□□ -0.78
LSB6YJL100W YKT6P36015 200 aaKnown RBP10.2□□□□□ -0.78
LSB6YJL100W PCH2P38126 564 aa10.2□□□□□ -0.78
LSB6YJL100W CIN4P39110 191 aa10.2□□□□□ -0.78
LSB6YJL100W STR2P47164 639 aa10.2□□□□□ -0.78
LSB6YJL100W SAS4Q04003 481 aa10.2□□□□□ -0.78
LSB6YJL100W TMA16Q08687 178 aa10.2□□□□□ -0.78
LSB6YJL100W DIT2P21595 489 aa10.19□□□□□ -0.78
LSB6YJL100W ERT1P38140 529 aa10.19□□□□□ -0.78
LSB6YJL100W PGI1P12709 554 aaKnown RBP10.19□□□□□ -0.78
LSB6YJL100W CAF20P12962 161 aaKnown RBP10.19□□□□□ -0.78
LSB6YJL100W SKI2P35207 1287 aaKnown RBP RIP-Chip data10.19□□□□□ -0.78not detected
LSB6YJL100W HAL5P38970 855 aaKnown RBP10.19□□□□□ -0.78
LSB6YJL100W UTP13Q05946 817 aaKnown RBP10.19□□□□□ -0.78
LSB6YJL100W COG4Q06096 861 aa10.19□□□□□ -0.78
LSB6YJL100W HXK1P04806 485 aaKnown RBP10.18□□□□□ -0.78
LSB6YJL100W PFK2P16862 959 aaKnown RBP RIP-Chip data10.18□□□□□ -0.78not detected
LSB6YJL100W SPB4P25808 606 aaPredicted RBP10.18□□□□□ -0.78
LSB6YJL100W MSH4P40965 878 aaPredicted RBP10.18□□□□□ -0.78
LSB6YJL100W ERO1Q03103 563 aa10.18□□□□□ -0.78
LSB6YJL100W TAH18Q12181 623 aa10.18□□□□□ -0.78
LSB6YJL100W DPH6Q12429 685 aa10.18□□□□□ -0.78
LSB6YJL100W ADR1P07248 1323 aa10.18□□□□□ -0.78
LSB6YJL100W PET123P17558 318 aa10.17□□□□□ -0.78
LSB6YJL100W SMY1P32364 656 aaKnown RBP10.17□□□□□ -0.78
LSB6YJL100W MET1P36150 593 aa10.17□□□□□ -0.78
LSB6YJL100W AKR1P39010 764 aa10.17□□□□□ -0.78
LSB6YJL100W UBP10P53874 792 aaPredicted RBP10.17□□□□□ -0.78
LSB6YJL100W KAR5Q04746 504 aa10.17□□□□□ -0.78
LSB6YJL100W NGR1P32831 672 aaKnown RBP10.17□□□□□ -0.78
LSB6YJL100W RPN10P38886 268 aaKnown RBP10.17□□□□□ -0.78
LSB6YJL100W YGR130CP53278 816 aa10.17□□□□□ -0.78
LSB6YJL100W VPS60Q03390 229 aa10.17□□□□□ -0.78
LSB6YJL100W PPM2Q08282 695 aa10.17□□□□□ -0.78
LSB6YJL100W DCS2Q12123 353 aa10.17□□□□□ -0.78
LSB6YJL100W RER2P35196 286 aa10.16□□□□□ -0.78
LSB6YJL100W TFG2P41896 400 aaPredicted RBP10.16□□□□□ -0.78
LSB6YJL100W SSF2Q12153 453 aaPredicted RBP10.16□□□□□ -0.78
LSB6YJL100W VPS1P21576 704 aaKnown RBP10.15□□□□□ -0.78
LSB6YJL100W RRP43P25359 394 aaPredicted RBP10.15□□□□□ -0.78
LSB6YJL100W ICP55P40051 511 aa10.15□□□□□ -0.78
LSB6YJL100W VPS75P53853 264 aa10.15□□□□□ -0.78
LSB6YJL100W EST2Q06163 884 aa10.15□□□□□ -0.78
LSB6YJL100W THI3Q07471 609 aa10.15□□□□□ -0.78
LSB6YJL100W PDC1P06169 563 aaKnown RBP10.14□□□□□ -0.79
LSB6YJL100W CDC6P09119 513 aa10.14□□□□□ -0.79
LSB6YJL100W URA1P28272 314 aaPredicted RBP10.14□□□□□ -0.79
LSB6YJL100W SIS2P36024 562 aa10.14□□□□□ -0.79
LSB6YJL100W RTT107P38850 1070 aa10.14□□□□□ -0.79
LSB6YJL100W CRG1P38892 291 aaRIP-Chip data10.14□□□□□ -0.79 RIP-Chip
LSB6YJL100W HDA1P53973 706 aa10.14□□□□□ -0.79
LSB6YJL100W SPN1Q06505 410 aaPredicted RBP10.14□□□□□ -0.79
LSB6YJL100W POM152P39685 1337 aa10.14□□□□□ -0.79
LSB6YJL100W CHO2P05374 869 aaKnown RBP10.14□□□□□ -0.79
LSB6YJL100W COQ1P18900 473 aa10.14□□□□□ -0.79
LSB6YJL100W MGM1P32266 881 aa10.14□□□□□ -0.79
LSB6YJL100W YER156CP40093 338 aaKnown RBP10.14□□□□□ -0.79
LSB6YJL100W AFT2Q08957 416 aa10.14□□□□□ -0.79
LSB6YJL100W ARP8Q12386 881 aaKnown RBP RIP-Chip data10.14□□□□□ -0.79not detected
LSB6YJL100W MRC1P25588 1096 aa10.13□□□□□ -0.79
LSB6YJL100W NUG1P40010 520 aaKnown RBP10.13□□□□□ -0.79
LSB6YJL100W NOP14Q99207 810 aaKnown RBP10.13□□□□□ -0.79
LSB6YJL100W PET111P08468 800 aa10.12□□□□□ -0.79
LSB6YJL100W SWI4P25302 1093 aaKnown RBP10.12□□□□□ -0.79
LSB6YJL100W GLO3P38682 493 aaKnown RBP10.12□□□□□ -0.79
LSB6YJL100W YCG1Q06680 1035 aa10.12□□□□□ -0.79
LSB6YJL100W MCM16Q12262 181 aa10.12□□□□□ -0.79
LSB6YJL100W GRX6Q12438 231 aa10.12□□□□□ -0.79
LSB6YJL100W MPH3P0CE00 602 aa10.12□□□□□ -0.79
LSB6YJL100W CBP3P21560 335 aa10.12□□□□□ -0.79
LSB6YJL100W SAC6P32599 642 aaKnown RBP10.12□□□□□ -0.79
LSB6YJL100W GRX7P38068 203 aa10.12□□□□□ -0.79
LSB6YJL100W PTK2P47116 818 aaKnown RBP10.12□□□□□ -0.79
LSB6YJL100W KIN4Q01919 800 aa10.12□□□□□ -0.79
LSB6YJL100W RRB1Q04225 511 aaKnown RBP10.12□□□□□ -0.79
Retrieved 100 of 5,963 RNA–protein pairs in 69.7 ms