RNA–Protein interactions for RNA: YJL001W

PRE3, Transcript of Beta 1 subunit of the 20S proteasome, yeastyeast

Gene PRE3, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE3YJL001W GAS5Q08193 484 aa7.97□□□□□ -1.13
PRE3YJL001W VPS64Q03944 604 aa7.96□□□□□ -1.14
PRE3YJL001W GSC2P40989 1895 aa7.96□□□□□ -1.14
PRE3YJL001W KEX2P13134 814 aa7.95□□□□□ -1.14
PRE3YJL001W SPT5P27692 1063 aaKnown RBP7.95□□□□□ -1.14
PRE3YJL001W AFG2P32794 780 aa7.95□□□□□ -1.14
PRE3YJL001W BSD2P38356 321 aa7.95□□□□□ -1.14
PRE3YJL001W MAK16P10962 306 aaPredicted RBP7.94□□□□□ -1.14
PRE3YJL001W SUP45P12385 437 aaKnown RBP7.94□□□□□ -1.14
PRE3YJL001W NPL4P33755 580 aa7.94□□□□□ -1.14
PRE3YJL001W NCS6P53088 359 aa7.94□□□□□ -1.14
PRE3YJL001W CSR2Q12734 1121 aa7.94□□□□□ -1.14
PRE3YJL001W FLO11P08640 1367 aa7.94□□□□□ -1.14
PRE3YJL001W COQ4O13525 335 aa7.93□□□□□ -1.14
PRE3YJL001W TRM1P15565 570 aaKnown RBP7.93□□□□□ -1.14
PRE3YJL001W KRE2P27809 442 aa7.93□□□□□ -1.14
PRE3YJL001W GEF1P37020 779 aa7.93□□□□□ -1.14
PRE3YJL001W PUS6P53294 404 aa7.93□□□□□ -1.14
PRE3YJL001W CRF1Q04930 467 aa7.93□□□□□ -1.14
PRE3YJL001W RRG1Q12167 365 aaPredicted RBP7.93□□□□□ -1.14
PRE3YJL001W TTI1P36097 1038 aa7.92□□□□□ -1.14
PRE3YJL001W PNT1P38969 423 aa7.92□□□□□ -1.14
PRE3YJL001W POL5P39985 1022 aaKnown RBP7.92□□□□□ -1.14
PRE3YJL001W FCP1Q03254 732 aa7.92□□□□□ -1.14
PRE3YJL001W ERF2Q06551 359 aa7.92□□□□□ -1.14
PRE3YJL001W PDR1P12383 1068 aa7.91□□□□□ -1.14
PRE3YJL001W YDJ1P25491 409 aaKnown RBP7.91□□□□□ -1.14
PRE3YJL001W MOT2P34909 587 aaKnown RBP7.91□□□□□ -1.14
PRE3YJL001W ZDS1P50111 915 aaKnown RBP7.91□□□□□ -1.14
PRE3YJL001W BMS1Q08965 1183 aaKnown RBP7.91□□□□□ -1.14
PRE3YJL001W DPH6Q12429 685 aa7.91□□□□□ -1.14
PRE3YJL001W ENO2P00925 437 aaKnown RBP7.9□□□□□ -1.14
PRE3YJL001W RAM1P22007 431 aa7.9□□□□□ -1.14
PRE3YJL001W PRD1P25375 712 aa7.9□□□□□ -1.14
PRE3YJL001W SPL2P38839 148 aa7.9□□□□□ -1.14
PRE3YJL001W ICP55P40051 511 aa7.9□□□□□ -1.14
PRE3YJL001W MAM1P40065 302 aa7.9□□□□□ -1.14
PRE3YJL001W RRT6P53117 311 aaPredicted RBP7.9□□□□□ -1.14
PRE3YJL001W TBF1Q02457 562 aa7.9□□□□□ -1.14
PRE3YJL001W PKH1Q03407 766 aa7.9□□□□□ -1.14
PRE3YJL001W UBX2Q04228 584 aa7.9□□□□□ -1.14
PRE3YJL001W SWI1P09547 1314 aa7.89□□□□□ -1.15
PRE3YJL001W APE3P37302 537 aaKnown RBP7.88□□□□□ -1.15
PRE3YJL001W PAM1P37304 830 aaKnown RBP7.88□□□□□ -1.15
PRE3YJL001W RTR1P40084 226 aaPredicted RBP7.88□□□□□ -1.15
PRE3YJL001W ISM1P48526 1002 aa7.88□□□□□ -1.15
PRE3YJL001W RPT4P53549 437 aaKnown RBP7.88□□□□□ -1.15
PRE3YJL001W YOL057WQ08225 711 aa7.88□□□□□ -1.15
PRE3YJL001W YPR015CQ12531 247 aa7.88□□□□□ -1.15
PRE3YJL001W ENO1P00924 437 aaKnown RBP7.87□□□□□ -1.15
PRE3YJL001W CBP1P07252 654 aa7.87□□□□□ -1.15
PRE3YJL001W STR2P47164 639 aa7.87□□□□□ -1.15
PRE3YJL001W SAC3P46674 1301 aa7.86□□□□□ -1.15
PRE3YJL001W YBR287WP38355 427 aa7.86□□□□□ -1.15
PRE3YJL001W UTP7P40055 554 aaKnown RBP7.86□□□□□ -1.15
PRE3YJL001W GSM1P42950 618 aa7.86□□□□□ -1.15
PRE3YJL001W DNM1P54861 757 aa7.86□□□□□ -1.15
PRE3YJL001W GCD11P32481 527 aaKnown RBP7.85□□□□□ -1.15
PRE3YJL001W SIS2P36024 562 aa7.85□□□□□ -1.15
PRE3YJL001W YJR008WP47085 338 aa7.85□□□□□ -1.15
PRE3YJL001W RIM21P48565 533 aa7.85□□□□□ -1.15
PRE3YJL001W NAF1P53919 492 aaKnown RBP7.85□□□□□ -1.15
PRE3YJL001W SEN54Q02825 467 aaPredicted RBP7.85□□□□□ -1.15
PRE3YJL001W PRP42Q03776 544 aaKnown RBP7.85□□□□□ -1.15
PRE3YJL001W MRX10Q05648 414 aa7.85□□□□□ -1.15
PRE3YJL001W YPR117WQ06116 2489 aa7.85□□□□□ -1.15
PRE3YJL001W DUR1,2P32528 1835 aaKnown RBP7.85□□□□□ -1.15
PRE3YJL001W MGM1P32266 881 aa7.84□□□□□ -1.15
PRE3YJL001W SLX8P40072 274 aa7.84□□□□□ -1.15
PRE3YJL001W CST6P40535 587 aa7.84□□□□□ -1.15
PRE3YJL001W YPP1P46951 817 aa7.84□□□□□ -1.15
PRE3YJL001W MTC3P53077 123 aa7.84□□□□□ -1.15
PRE3YJL001W RBA50Q04418 439 aa7.84□□□□□ -1.15
PRE3YJL001W THI22Q06490 572 aa7.84□□□□□ -1.15
PRE3YJL001W YDR306CQ06640 478 aa7.84□□□□□ -1.15
PRE3YJL001W YML020WQ03722 664 aa7.83□□□□□ -1.16
PRE3YJL001W TOS4Q06266 489 aa7.83□□□□□ -1.16
PRE3YJL001W THI3Q07471 609 aa7.83□□□□□ -1.16
PRE3YJL001W RTT109Q07794 436 aa7.83□□□□□ -1.16
PRE3YJL001W TAO3P40468 2376 aa7.82□□□□□ -1.16
PRE3YJL001W RPS7AP26786 190 aaKnown RBP7.82□□□□□ -1.16
PRE3YJL001W NGR1P32831 672 aaKnown RBP7.82□□□□□ -1.16
PRE3YJL001W GYP7P48365 746 aa7.82□□□□□ -1.16
PRE3YJL001W TUB4P53378 473 aa7.82□□□□□ -1.16
PRE3YJL001W RPL34AP87262 121 aaPredicted RBP7.82□□□□□ -1.16
PRE3YJL001W IOC4Q04213 475 aa7.82□□□□□ -1.16
PRE3YJL001W NOB1Q08444 459 aaKnown RBP7.82□□□□□ -1.16
PRE3YJL001W YDL206WQ12424 762 aa7.82□□□□□ -1.16
PRE3YJL001W ARG82P07250 355 aa7.81□□□□□ -1.16
PRE3YJL001W LCB1P25045 558 aaKnown RBP7.81□□□□□ -1.16
PRE3YJL001W NUP133P36161 1157 aa7.81□□□□□ -1.16
PRE3YJL001W MAL31P38156 614 aa7.81□□□□□ -1.16
PRE3YJL001W ITC1P53125 1264 aa7.81□□□□□ -1.16
PRE3YJL001W IRC4Q03036 179 aa7.81□□□□□ -1.16
PRE3YJL001W AGE1Q04412 482 aa7.81□□□□□ -1.16
PRE3YJL001W TY1A-DR4O74302 440 aa7.8□□□□□ -1.16
PRE3YJL001W TY1A-HP0C2I4 478 aaKnown RBP7.8□□□□□ -1.16
PRE3YJL001W TY1A-AP0CX57 440 aa7.8□□□□□ -1.16
PRE3YJL001W TY1A-PR1P0CX58 440 aa7.8□□□□□ -1.16
PRE3YJL001W TY1A-ORP0CX59 440 aa7.8□□□□□ -1.16
Retrieved 100 of 5,963 RNA–protein pairs in 33.6 ms