RNA–Protein interactions for RNA: YIL076W

SEC28, Transcript of Epsilon-COP subunit of the coatomer, yeastyeast

Gene SEC28, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC28YIL076W TFA2P36145 328 aa7.42□□□□□ -1.22
SEC28YIL076W ERP5P38819 212 aa7.42□□□□□ -1.22
SEC28YIL076W BIO5P53744 561 aaKnown RBP7.41□□□□□ -1.22
SEC28YIL076W PYC2P32327 1180 aaKnown RBP7.4□□□□□ -1.22
SEC28YIL076W TRS120Q04183 1289 aa7.4□□□□□ -1.22
SEC28YIL076W SOG2Q08817 791 aa7.39□□□□□ -1.23
SEC28YIL076W TY4B-PA0A0B7P3V8 1104 aa7.38□□□□□ -1.23
SEC28YIL076W AI3P03877 415 aa7.38□□□□□ -1.23
SEC28YIL076W AMN1P38285 549 aaPredicted RBP7.38□□□□□ -1.23
SEC28YIL076W MDJ2P42834 146 aa7.38□□□□□ -1.23
SEC28YIL076W TY4A-HQ6Q5P6 413 aa7.38□□□□□ -1.23
SEC28YIL076W PAN5P38787 379 aa7.36□□□□□ -1.23
SEC28YIL076W LSB6P42951 607 aa7.36□□□□□ -1.23
SEC28YIL076W GUP1P53154 560 aa7.36□□□□□ -1.23
SEC28YIL076W RSC4Q02206 625 aa7.36□□□□□ -1.23
SEC28YIL076W CTR9P89105 1077 aa7.35□□□□□ -1.23
SEC28YIL076W MNL2Q12205 849 aa7.35□□□□□ -1.23
SEC28YIL076W FRT1Q99332 602 aa7.35□□□□□ -1.23
SEC28YIL076W SAC7P17121 654 aa7.34□□□□□ -1.23
SEC28YIL076W SFA1P32771 386 aa7.34□□□□□ -1.23
SEC28YIL076W YJR124CP47159 448 aa7.34□□□□□ -1.23
SEC28YIL076W YPL034WQ03083 165 aa7.34□□□□□ -1.23
SEC28YIL076W GLO4Q12320 285 aa7.34□□□□□ -1.23
SEC28YIL076W COBP00163 385 aa7.33□□□□□ -1.24
SEC28YIL076W HVG1P0CE11 249 aa7.33□□□□□ -1.24
SEC28YIL076W NEO1P40527 1151 aa7.33□□□□□ -1.24
SEC28YIL076W LEM3P42838 414 aa7.33□□□□□ -1.24
SEC28YIL076W YNR065CP53751 1116 aa7.33□□□□□ -1.24
SEC28YIL076W YNL011CP53980 444 aa7.33□□□□□ -1.24
SEC28YIL076W NUT2Q06213 157 aa7.33□□□□□ -1.24
SEC28YIL076W DSE4P53753 1117 aa7.32□□□□□ -1.24
SEC28YIL076W TY1A-NL1Q12391 440 aaKnown RBP7.32□□□□□ -1.24
SEC28YIL076W SBP1P10080 294 aaKnown RBP7.31□□□□□ -1.24
SEC28YIL076W SSF1P38789 453 aaPredicted RBP7.31□□□□□ -1.24
SEC28YIL076W ARI1P53111 347 aaKnown RBP7.31□□□□□ -1.24
SEC28YIL076W CDC55Q00362 526 aa7.31□□□□□ -1.24
SEC28YIL076W BSC2Q05611 235 aa7.31□□□□□ -1.24
SEC28YIL076W HAS1Q03532 505 aaKnown RBP7.3□□□□□ -1.24
SEC28YIL076W SPO71Q03868 1245 aa7.3□□□□□ -1.24
SEC28YIL076W RSC6P25632 483 aa7.29□□□□□ -1.24
SEC28YIL076W ECM2P38241 364 aaKnown RBP7.29□□□□□ -1.24
SEC28YIL076W POL5P39985 1022 aaKnown RBP7.29□□□□□ -1.24
SEC28YIL076W FET4P40988 552 aa7.29□□□□□ -1.24
SEC28YIL076W GPI13Q07830 1017 aa7.29□□□□□ -1.24
SEC28YIL076W PGM1P33401 570 aaKnown RBP7.28□□□□□ -1.24
SEC28YIL076W DUR3P33413 735 aa7.28□□□□□ -1.24
SEC28YIL076W YHL050CP38721 697 aa7.28□□□□□ -1.24
SEC28YIL076W YHR219WP38900 624 aa7.28□□□□□ -1.24
SEC28YIL076W GLT1Q12680 2145 aaKnown RBP7.28□□□□□ -1.24
SEC28YIL076W YHL008CP38750 627 aa7.27□□□□□ -1.25
SEC28YIL076W ELG1Q12050 791 aa7.27□□□□□ -1.25
SEC28YIL076W MAE1P36013 669 aaKnown RBP7.26□□□□□ -1.25
SEC28YIL076W RIM11P38615 370 aa7.26□□□□□ -1.25
SEC28YIL076W CMR1Q12510 522 aaKnown RBP7.26□□□□□ -1.25
SEC28YIL076W FLP1P03870 423 aa7.25□□□□□ -1.25
SEC28YIL076W ERS1P17261 260 aa7.25□□□□□ -1.25
SEC28YIL076W NPR1P22211 790 aa7.24□□□□□ -1.25
SEC28YIL076W MSH6Q03834 1242 aa7.24□□□□□ -1.25
SEC28YIL076W INP54Q08227 384 aaKnown RBP7.24□□□□□ -1.25
SEC28YIL076W REC8Q12188 680 aa7.24□□□□□ -1.25
SEC28YIL076W COQ2P32378 372 aa7.23□□□□□ -1.25
SEC28YIL076W AKR1P39010 764 aa7.22□□□□□ -1.25
SEC28YIL076W NOC3Q07896 663 aaPredicted RBP7.22□□□□□ -1.25
SEC28YIL076W STM1P39015 273 aaKnown RBP7.21□□□□□ -1.26
SEC28YIL076W KIP3P53086 805 aaKnown RBP7.21□□□□□ -1.26
SEC28YIL076W PRP5P21372 849 aaPredicted RBP7.2□□□□□ -1.26
SEC28YIL076W NAM7P30771 971 aaKnown RBP7.2□□□□□ -1.26
SEC28YIL076W SAM37P50110 327 aa7.2□□□□□ -1.26
SEC28YIL076W NUT1P53114 1132 aa7.2□□□□□ -1.26
SEC28YIL076W NCE103P53615 221 aa7.2□□□□□ -1.26
SEC28YIL076W FAR11P53917 953 aa7.2□□□□□ -1.26
SEC28YIL076W YLR122CQ12312 125 aa7.2□□□□□ -1.26
SEC28YIL076W HTS1P07263 546 aaKnown RBP7.19□□□□□ -1.26
SEC28YIL076W SAF1P38352 637 aa7.19□□□□□ -1.26
SEC28YIL076W SAP155P43612 1002 aa7.19□□□□□ -1.26
SEC28YIL076W MON1P53129 644 aa7.19□□□□□ -1.26
SEC28YIL076W YMR074CQ04773 145 aa7.19□□□□□ -1.26
SEC28YIL076W PMT7Q06644 662 aa7.19□□□□□ -1.26
SEC28YIL076W PPX1P38698 397 aa7.18□□□□□ -1.26
SEC28YIL076W CIC1P38779 376 aaKnown RBP7.18□□□□□ -1.26
SEC28YIL076W ALO1P54783 526 aaKnown RBP7.18□□□□□ -1.26
SEC28YIL076W MSC6Q08818 692 aaKnown RBP7.18□□□□□ -1.26
SEC28YIL076W YIG1Q08956 461 aa7.18□□□□□ -1.26
SEC28YIL076W YAF9P53930 226 aa7.17□□□□□ -1.26
SEC28YIL076W PUF3Q07807 879 aaKnown RBP RIP-Chip data7.17□□□□□ -1.26not detected
SEC28YIL076W WHI5Q12416 295 aa7.17□□□□□ -1.26
SEC28YIL076W MCM5P29496 775 aaKnown RBP7.16□□□□□ -1.26
SEC28YIL076W KAE1P36132 386 aa7.16□□□□□ -1.26
SEC28YIL076W GCV1P48015 400 aa7.16□□□□□ -1.26
SEC28YIL076W CHS2P14180 963 aa7.15□□□□□ -1.26
SEC28YIL076W MET4P32389 672 aa7.15□□□□□ -1.26
SEC28YIL076W THI12P42883 340 aa7.15□□□□□ -1.26
SEC28YIL076W THI5P43534 340 aa7.15□□□□□ -1.26
SEC28YIL076W THI11P47183 340 aa7.15□□□□□ -1.26
SEC28YIL076W THI13Q07748 340 aa7.15□□□□□ -1.26
SEC28YIL076W YOR223WQ12015 292 aa7.15□□□□□ -1.26
SEC28YIL076W PHO4P07270 312 aaKnown RBP7.14□□□□□ -1.27
SEC28YIL076W NRD1P53617 575 aaKnown RBP RIP-Chip data7.14□□□□□ -1.27not detected
SEC28YIL076W YCS4Q06156 1176 aa7.14□□□□□ -1.27
SEC28YIL076W TRP3P00937 484 aa7.13□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 67.2 ms