RNA–Protein interactions for RNA: YGR253C

PUP2, Transcript of Alpha 5 subunit of the 20S proteasome, yeastyeast

Gene PUP2, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP2YGR253C BOI1P38041 980 aaKnown RBP8.88□□□□□ -0.99
PUP2YGR253C VAB2P40003 282 aa8.88□□□□□ -0.99
PUP2YGR253C PIP2P52960 996 aa8.88□□□□□ -0.99
PUP2YGR253C YVH1Q02256 364 aaKnown RBP8.88□□□□□ -0.99
PUP2YGR253C KIN1P13185 1064 aa8.87□□□□□ -0.99
PUP2YGR253C LDH1P38139 375 aa8.87□□□□□ -0.99
PUP2YGR253C SSF1P38789 453 aaPredicted RBP8.87□□□□□ -0.99
PUP2YGR253C CLA4P48562 842 aa8.87□□□□□ -0.99
PUP2YGR253C YDL124WQ07551 312 aaKnown RBP8.87□□□□□ -0.99
PUP2YGR253C SRS2P12954 1174 aa8.86□□□□□ -0.99
PUP2YGR253C MSH4P40965 878 aaPredicted RBP8.86□□□□□ -0.99
PUP2YGR253C SNU71P53207 620 aaKnown RBP8.85□□□□□ -0.99
PUP2YGR253C VPS13Q07878 3144 aa8.85□□□□□ -0.99
PUP2YGR253C CYB2P00175 591 aa8.84□□□□□ -0.99
PUP2YGR253C GRX7P38068 203 aa8.84□□□□□ -0.99
PUP2YGR253C YJL007CP47080 104 aa8.84□□□□□ -0.99
PUP2YGR253C KEL3Q08979 651 aaPredicted RBP8.84□□□□□ -0.99
PUP2YGR253C ARP8Q12386 881 aaKnown RBP RIP-Chip data8.84□□□□□ -0.99not detected
PUP2YGR253C TAO3P40468 2376 aa8.83□□□□□ -1
PUP2YGR253C DAL5P15365 543 aa8.83□□□□□ -1
PUP2YGR253C YNG2P38806 282 aaKnown RBP8.83□□□□□ -1
PUP2YGR253C SUB2Q07478 446 aaKnown RBP8.83□□□□□ -1
PUP2YGR253C CDC45Q08032 650 aa8.83□□□□□ -1
PUP2YGR253C ICL2Q12031 575 aa8.83□□□□□ -1
PUP2YGR253C HGH1P48362 394 aaKnown RBP8.82□□□□□ -1
PUP2YGR253C YOR131CQ12486 218 aa8.82□□□□□ -1
PUP2YGR253C KRS1P15180 591 aaKnown RBP8.81□□□□□ -1
PUP2YGR253C CST26P38226 397 aa8.81□□□□□ -1
PUP2YGR253C YIL092WP40497 633 aa8.81□□□□□ -1
PUP2YGR253C SPO1P53541 631 aa8.81□□□□□ -1
PUP2YGR253C LAP2Q10740 671 aa8.81□□□□□ -1
PUP2YGR253C RVB2Q12464 471 aaKnown RBP8.81□□□□□ -1
PUP2YGR253C ERG12P07277 443 aa8.8□□□□□ -1
PUP2YGR253C MPH3P0CE00 602 aa8.8□□□□□ -1
PUP2YGR253C DIT2P21595 489 aa8.8□□□□□ -1
PUP2YGR253C SPB4P25808 606 aaPredicted RBP8.8□□□□□ -1
PUP2YGR253C GCD7P32502 381 aaPredicted RBP8.8□□□□□ -1
PUP2YGR253C FIR1P40020 876 aa8.8□□□□□ -1
PUP2YGR253C ECM30Q06673 1274 aa8.8□□□□□ -1
PUP2YGR253C UBX5Q06682 500 aa8.8□□□□□ -1
PUP2YGR253C NCB2Q92317 146 aa8.8□□□□□ -1
PUP2YGR253C PER1P25625 357 aa8.79□□□□□ -1
PUP2YGR253C DLD1P32891 587 aa8.79□□□□□ -1
PUP2YGR253C TIF4631P39935 952 aaKnown RBP8.79□□□□□ -1
PUP2YGR253C BRE5P53741 515 aaKnown RBP8.79□□□□□ -1
PUP2YGR253C EAR1Q03212 550 aa8.79□□□□□ -1
PUP2YGR253C NAB6Q03735 1134 aaKnown RBP RIP-Chip data8.79□□□□□ -1not detected
PUP2YGR253C SUT2Q12286 268 aa8.79□□□□□ -1
PUP2YGR253C PRE10P21242 288 aaKnown RBP RIP-Chip data8.78□□□□□ -1not detected
PUP2YGR253C PKC1P24583 1151 aa8.78□□□□□ -1
PUP2YGR253C EUG1P32474 517 aa8.78□□□□□ -1
PUP2YGR253C UIP5P36137 443 aa8.78□□□□□ -1
PUP2YGR253C KTR3P38130 404 aaPredicted RBP8.78□□□□□ -1
PUP2YGR253C FUN12P39730 1002 aaKnown RBP8.78□□□□□ -1
PUP2YGR253C YML037CQ03703 340 aa8.78□□□□□ -1
PUP2YGR253C MET7Q08645 548 aa8.78□□□□□ -1
PUP2YGR253C VMA2P16140 517 aaKnown RBP8.77□□□□□ -1.01
PUP2YGR253C PRE8P23639 250 aa8.77□□□□□ -1.01
PUP2YGR253C WHI3P34761 661 aaKnown RBP8.77□□□□□ -1.01
PUP2YGR253C MXR1P40029 184 aa8.77□□□□□ -1.01
PUP2YGR253C AIM21P40563 679 aa8.77□□□□□ -1.01
PUP2YGR253C YPL034WQ03083 165 aa8.77□□□□□ -1.01
PUP2YGR253C YPL260WQ08977 551 aa8.77□□□□□ -1.01
PUP2YGR253C YPR117WQ06116 2489 aa8.77□□□□□ -1.01
PUP2YGR253C YJR107WP47145 328 aa8.76□□□□□ -1.01
PUP2YGR253C YGL242CP53066 181 aa8.76□□□□□ -1.01
PUP2YGR253C UBP10P53874 792 aaPredicted RBP8.76□□□□□ -1.01
PUP2YGR253C MAM3Q12296 706 aa8.76□□□□□ -1.01
PUP2YGR253C GEF1P37020 779 aa8.75□□□□□ -1.01
PUP2YGR253C ILV3P39522 585 aaKnown RBP8.75□□□□□ -1.01
PUP2YGR253C AFG3P39925 761 aa8.75□□□□□ -1.01
PUP2YGR253C YFL040WP43562 540 aa8.75□□□□□ -1.01
PUP2YGR253C YRB30P53107 440 aaPredicted RBP8.75□□□□□ -1.01
PUP2YGR253C MDM20Q12387 796 aaKnown RBP8.75□□□□□ -1.01
PUP2YGR253C SRM1P21827 482 aa8.74□□□□□ -1.01
PUP2YGR253C NPL4P33755 580 aa8.74□□□□□ -1.01
PUP2YGR253C TFA1P36100 482 aa8.74□□□□□ -1.01
PUP2YGR253C DUS4Q06063 367 aa8.74□□□□□ -1.01
PUP2YGR253C RAD2P07276 1031 aa8.73□□□□□ -1.01
PUP2YGR253C GPB2P39717 880 aa8.73□□□□□ -1.01
PUP2YGR253C YMR147WP40218 223 aaKnown RBP8.73□□□□□ -1.01
PUP2YGR253C IRC8P47046 822 aa8.73□□□□□ -1.01
PUP2YGR253C MLC1P53141 149 aa8.73□□□□□ -1.01
PUP2YGR253C YAF9P53930 226 aa8.73□□□□□ -1.01
PUP2YGR253C FMP30Q02883 468 aa8.73□□□□□ -1.01
PUP2YGR253C BCS1P32839 456 aa8.72□□□□□ -1.01
PUP2YGR253C RGT1P32862 1170 aa8.72□□□□□ -1.01
PUP2YGR253C IOC3P43596 787 aa8.72□□□□□ -1.01
PUP2YGR253C ALO1P54783 526 aaKnown RBP8.72□□□□□ -1.01
PUP2YGR253C KSP1P38691 1029 aaKnown RBP8.71□□□□□ -1.02
PUP2YGR253C SKG3Q06315 1026 aa8.71□□□□□ -1.02
PUP2YGR253C NOT3P06102 836 aaKnown RBP8.7□□□□□ -1.02
PUP2YGR253C SRP40P32583 406 aaPredicted RBP8.7□□□□□ -1.02
PUP2YGR253C KTR2P33550 425 aa8.7□□□□□ -1.02
PUP2YGR253C YKR018CP36114 725 aa8.7□□□□□ -1.02
PUP2YGR253C MAP2P38174 421 aaKnown RBP8.7□□□□□ -1.02
PUP2YGR253C EPS1P40557 701 aa8.7□□□□□ -1.02
PUP2YGR253C BDP1P46678 594 aa8.7□□□□□ -1.02
PUP2YGR253C RMD1Q03441 430 aa8.7□□□□□ -1.02
PUP2YGR253C BUL2Q03758 920 aaKnown RBP8.7□□□□□ -1.02
Retrieved 100 of 5,963 RNA–protein pairs in 32.3 ms