RNA–Protein interactions for RNA: YGR028W

MSP1, Transcript of Highly-conserved N-terminally anchored AAA-ATPase, yeastyeast

Gene MSP1, Length 1,089 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSP1YGR028W FBP26P32604 452 aa8.37□□□□□ -1.07
MSP1YGR028W SNF2P22082 1703 aa8.37□□□□□ -1.07
MSP1YGR028W GRX1P25373 110 aaKnown RBP8.36□□□□□ -1.07
MSP1YGR028W POL5P39985 1022 aaKnown RBP8.36□□□□□ -1.07
MSP1YGR028W YBP2P53169 641 aa8.36□□□□□ -1.07
MSP1YGR028W RAD4P14736 754 aa8.35□□□□□ -1.07
MSP1YGR028W HSP104P31539 908 aaKnown RBP8.35□□□□□ -1.07
MSP1YGR028W PAP2P53632 584 aaKnown RBP8.35□□□□□ -1.07
MSP1YGR028W ISU1Q03020 165 aa8.35□□□□□ -1.07
MSP1YGR028W TOS1P38288 455 aa8.34□□□□□ -1.07
MSP1YGR028W DSD1P53095 428 aa8.34□□□□□ -1.07
MSP1YGR028W RIX7Q07844 837 aaKnown RBP8.34□□□□□ -1.07
MSP1YGR028W NUP145P49687 1317 aa8.33□□□□□ -1.08
MSP1YGR028W ARG82P07250 355 aa8.33□□□□□ -1.08
MSP1YGR028W STE6P12866 1290 aa8.33□□□□□ -1.08
MSP1YGR028W RDS2P19541 446 aaKnown RBP8.33□□□□□ -1.08
MSP1YGR028W SOH1P38633 127 aa8.33□□□□□ -1.08
MSP1YGR028W SAP155P43612 1002 aa8.33□□□□□ -1.08
MSP1YGR028W YJR115WP47152 169 aa8.33□□□□□ -1.08
MSP1YGR028W MSN5P52918 1224 aa8.33□□□□□ -1.08
MSP1YGR028W ISR1Q06098 443 aaKnown RBP8.33□□□□□ -1.08
MSP1YGR028W BDS1Q08347 646 aa8.33□□□□□ -1.08
MSP1YGR028W SRF1Q12516 437 aa8.33□□□□□ -1.08
MSP1YGR028W PEP12P32854 288 aa8.32□□□□□ -1.08
MSP1YGR028W UTP22P53254 1237 aaPredicted RBP8.32□□□□□ -1.08
MSP1YGR028W MLP1Q02455 1875 aaKnown RBP8.32□□□□□ -1.08
MSP1YGR028W DFG5Q05031 458 aa8.31□□□□□ -1.08
MSP1YGR028W SPT2P06843 333 aaPredicted RBP8.3□□□□□ -1.08
MSP1YGR028W TTI1P36097 1038 aa8.3□□□□□ -1.08
MSP1YGR028W AKL1P38080 1108 aaKnown RBP8.3□□□□□ -1.08
MSP1YGR028W PTK2P47116 818 aaKnown RBP8.3□□□□□ -1.08
MSP1YGR028W CTI6Q08923 506 aa8.3□□□□□ -1.08
MSP1YGR028W YFL034WP43564 1073 aa8.29□□□□□ -1.08
MSP1YGR028W BUD27P43573 796 aaKnown RBP RIP-Chip data8.29□□□□□ -1.08not detected
MSP1YGR028W NUP85P46673 744 aa8.28□□□□□ -1.08
MSP1YGR028W SSA4P22202 642 aaKnown RBP8.27□□□□□ -1.09
MSP1YGR028W TBS1P38114 1094 aa8.27□□□□□ -1.09
MSP1YGR028W AAD14P42884 376 aa8.27□□□□□ -1.09
MSP1YGR028W CWH41P53008 833 aa8.27□□□□□ -1.09
MSP1YGR028W AOS1Q06624 347 aa8.27□□□□□ -1.09
MSP1YGR028W ALE1Q08548 619 aa8.27□□□□□ -1.09
MSP1YGR028W RIM15P43565 1770 aa8.26□□□□□ -1.09
MSP1YGR028W UTR2P32623 467 aa8.26□□□□□ -1.09
MSP1YGR028W YER156CP40093 338 aaKnown RBP8.26□□□□□ -1.09
MSP1YGR028W SQS1P53866 767 aaKnown RBP8.26□□□□□ -1.09
MSP1YGR028W CTF4Q01454 927 aa8.26□□□□□ -1.09
MSP1YGR028W KIN4Q01919 800 aa8.26□□□□□ -1.09
MSP1YGR028W RMT2Q03305 412 aa8.26□□□□□ -1.09
MSP1YGR028W NYV1Q12255 253 aa8.26□□□□□ -1.09
MSP1YGR028W CTT1P06115 562 aa8.25□□□□□ -1.09
MSP1YGR028W HAL5P38970 855 aaKnown RBP8.25□□□□□ -1.09
MSP1YGR028W DLD3P39976 496 aaKnown RBP8.25□□□□□ -1.09
MSP1YGR028W RRT14P40470 206 aa8.25□□□□□ -1.09
MSP1YGR028W YLR346CQ06139 101 aa8.25□□□□□ -1.09
MSP1YGR028W DAT1P13483 248 aaKnown RBP8.24□□□□□ -1.09
MSP1YGR028W HDA3Q06623 655 aa8.24□□□□□ -1.09
MSP1YGR028W KCC4P25389 1037 aa8.23□□□□□ -1.09
MSP1YGR028W SER1P33330 395 aaKnown RBP8.23□□□□□ -1.09
MSP1YGR028W NTH2P35172 780 aa8.23□□□□□ -1.09
MSP1YGR028W YKL222CP35995 705 aa8.23□□□□□ -1.09
MSP1YGR028W CBC2Q08920 208 aaKnown RBP RIP-Chip data8.23□□□□□ -1.09not detected
MSP1YGR028W WTM2Q12206 467 aa8.23□□□□□ -1.09
MSP1YGR028W TSC13Q99190 310 aa8.23□□□□□ -1.09
MSP1YGR028W MIP1P15801 1254 aa8.22□□□□□ -1.09
MSP1YGR028W ERT1P38140 529 aa8.22□□□□□ -1.09
MSP1YGR028W RRP46P53256 223 aaPredicted RBP8.22□□□□□ -1.09
MSP1YGR028W LSC2P53312 427 aa8.22□□□□□ -1.09
MSP1YGR028W HAP4P14064 554 aa8.21□□□□□ -1.1
MSP1YGR028W PHO87P25360 923 aa8.21□□□□□ -1.1
MSP1YGR028W TGL4P36165 910 aa8.21□□□□□ -1.1
MSP1YGR028W YGL082WP53155 381 aa8.21□□□□□ -1.1
MSP1YGR028W AIM9P40053 627 aaKnown RBP8.2□□□□□ -1.1
MSP1YGR028W LPD1P09624 499 aaKnown RBP8.19□□□□□ -1.1
MSP1YGR028W GAL2P13181 574 aa8.19□□□□□ -1.1
MSP1YGR028W SMY1P32364 656 aaKnown RBP8.19□□□□□ -1.1
MSP1YGR028W SLX8P40072 274 aa8.19□□□□□ -1.1
MSP1YGR028W KTR7P40504 517 aa8.19□□□□□ -1.1
MSP1YGR028W TOP1P04786 769 aa8.18□□□□□ -1.1
MSP1YGR028W CAF20P12962 161 aaKnown RBP8.18□□□□□ -1.1
MSP1YGR028W MET22P32179 357 aa8.17□□□□□ -1.1
MSP1YGR028W YFR016CP43597 1233 aaKnown RBP8.17□□□□□ -1.1
MSP1YGR028W PHM7Q12252 991 aa8.17□□□□□ -1.1
MSP1YGR028W PFF1P38244 976 aa8.16□□□□□ -1.1
MSP1YGR028W RTR1P40084 226 aaPredicted RBP8.16□□□□□ -1.1
MSP1YGR028W YJR098CP47139 656 aa8.16□□□□□ -1.1
MSP1YGR028W MDG1P53885 366 aa8.16□□□□□ -1.1
MSP1YGR028W UBP2Q01476 1272 aa8.16□□□□□ -1.1
MSP1YGR028W YDR444WQ04093 687 aa8.16□□□□□ -1.1
MSP1YGR028W LCB5Q06147 687 aaKnown RBP8.16□□□□□ -1.1
MSP1YGR028W APL2P36000 726 aaPredicted RBP8.15□□□□□ -1.1
MSP1YGR028W GLY1P37303 387 aaKnown RBP8.15□□□□□ -1.1
MSP1YGR028W VTC4P47075 721 aa8.15□□□□□ -1.1
MSP1YGR028W IRC3Q06683 689 aa8.15□□□□□ -1.1
MSP1YGR028W SWI5P08153 709 aa8.14□□□□□ -1.11
MSP1YGR028W RPS6AP0CX37 236 aaKnown RBP8.14□□□□□ -1.11
MSP1YGR028W RPS6BP0CX38 236 aaPredicted RBP8.14□□□□□ -1.11
MSP1YGR028W ICL1P28240 557 aaPredicted RBP8.14□□□□□ -1.11
MSP1YGR028W YBR287WP38355 427 aa8.14□□□□□ -1.11
MSP1YGR028W SUM1P46676 1062 aa8.14□□□□□ -1.11
MSP1YGR028W ACS2P52910 683 aaKnown RBP8.14□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms