RNA–Protein interactions for RNA: YFR029W

PTR3, Transcript of Component of the SPS plasma membrane amino acid sensor system, yeast

Gene PTR3, Length 2,037 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PTR3	YFR029W	CAB1	Q04430	367 aa		4.96	□□□□□ -1.62
PTR3	YFR029W	HXK1	P04806	485 aa	Known RBP	4.96	□□□□□ -1.62
PTR3	YFR029W	PRI2	P20457	528 aa		4.96	□□□□□ -1.62
PTR3	YFR029W	HIR1	P32479	840 aa		4.96	□□□□□ -1.62
PTR3	YFR029W	IXR1	P33417	597 aa		4.96	□□□□□ -1.62
PTR3	YFR029W	AIM9	P40053	627 aa	Known RBP	4.96	□□□□□ -1.62
PTR3	YFR029W	MID1	P41821	548 aa		4.96	□□□□□ -1.62
PTR3	YFR029W	GRX3	Q03835	250 aa		4.96	□□□□□ -1.62
PTR3	YFR029W	FOB1	O13329	566 aa		4.95	□□□□□ -1.62
PTR3	YFR029W	THI4	P32318	326 aa		4.95	□□□□□ -1.62
PTR3	YFR029W	DUT1	P33317	147 aa		4.95	□□□□□ -1.62
PTR3	YFR029W	FAA4	P47912	694 aa	Known RBP	4.95	□□□□□ -1.62
PTR3	YFR029W	YLR125W	Q12138	136 aa		4.95	□□□□□ -1.62
PTR3	YFR029W	VPS35	P34110	944 aa		4.94	□□□□□ -1.62
PTR3	YFR029W	YAP1801	P38856	637 aa		4.94	□□□□□ -1.62
PTR3	YFR029W	TIM54	P47045	478 aa		4.94	□□□□□ -1.62
PTR3	YFR029W	HDA3	Q06623	655 aa		4.94	□□□□□ -1.62
PTR3	YFR029W	ISU2	Q12056	156 aa		4.94	□□□□□ -1.62
PTR3	YFR029W	TY4B-P	A0A0B7P3V8	1104 aa		4.94	□□□□□ -1.62
PTR3	YFR029W	PET112	P33893	541 aa		4.94	□□□□□ -1.62
PTR3	YFR029W	GPP1	P41277	250 aa	Known RBP	4.94	□□□□□ -1.62
PTR3	YFR029W	DAS1	P47005	663 aa		4.94	□□□□□ -1.62
PTR3	YFR029W	ISM1	P48526	1002 aa		4.94	□□□□□ -1.62
PTR3	YFR029W	TYW3	P53177	273 aa		4.94	□□□□□ -1.62
PTR3	YFR029W	CWC24	P53769	259 aa		4.94	□□□□□ -1.62
PTR3	YFR029W	RRI2	Q12348	645 aa		4.94	□□□□□ -1.62
PTR3	YFR029W	TY4A-H	Q6Q5P6	413 aa		4.94	□□□□□ -1.62
PTR3	YFR029W	PDC1	P06169	563 aa	Known RBP	4.93	□□□□□ -1.62
PTR3	YFR029W	MTC2	P34246	357 aa		4.93	□□□□□ -1.62
PTR3	YFR029W	MUM2	P38236	366 aa		4.93	□□□□□ -1.62
PTR3	YFR029W	FAA3	P39002	694 aa		4.93	□□□□□ -1.62
PTR3	YFR029W	RSP5	P39940	809 aa	Known RBP	4.93	□□□□□ -1.62
PTR3	YFR029W	NIT1	P40447	199 aa		4.93	□□□□□ -1.62
PTR3	YFR029W	UFD2	P54860	961 aa		4.93	□□□□□ -1.62
PTR3	YFR029W	CDC55	Q00362	526 aa		4.93	□□□□□ -1.62
PTR3	YFR029W	ATG13	Q06628	738 aa		4.93	□□□□□ -1.62
PTR3	YFR029W	FLC1	Q08967	793 aa		4.93	□□□□□ -1.62
PTR3	YFR029W	VAC17	P25591	423 aa		4.92	□□□□□ -1.62
PTR3	YFR029W	GCD6	P32501	712 aa	Known RBP	4.92	□□□□□ -1.62
PTR3	YFR029W	ISC10	P32645	267 aa		4.92	□□□□□ -1.62
PTR3	YFR029W	NTH2	P35172	780 aa		4.92	□□□□□ -1.62
PTR3	YFR029W	SPF1	P39986	1215 aa	Known RBP	4.92	□□□□□ -1.62
PTR3	YFR029W	YGR053C	P53234	283 aa		4.92	□□□□□ -1.62
PTR3	YFR029W	NTG2	Q08214	380 aa		4.92	□□□□□ -1.62
PTR3	YFR029W	CYT1	P07143	309 aa		4.92	□□□□□ -1.62
PTR3	YFR029W	RAM1	P22007	431 aa		4.92	□□□□□ -1.62
PTR3	YFR029W	DPB3	P27344	201 aa		4.92	□□□□□ -1.62
PTR3	YFR029W	SWI3	P32591	825 aa		4.92	□□□□□ -1.62
PTR3	YFR029W	CHZ1	P40019	153 aa	Predicted RBP	4.92	□□□□□ -1.62
PTR3	YFR029W	BNA1	P47096	177 aa		4.92	□□□□□ -1.62
PTR3	YFR029W	GPG1	P53130	126 aa		4.92	□□□□□ -1.62
PTR3	YFR029W	ISR1	Q06098	443 aa	Known RBP	4.92	□□□□□ -1.62
PTR3	YFR029W	PSR1	Q07800	427 aa		4.92	□□□□□ -1.62
PTR3	YFR029W	SRF1	Q12516	437 aa		4.92	□□□□□ -1.62
PTR3	YFR029W	TMA7	Q3E764	64 aa	Known RBP	4.92	□□□□□ -1.62
PTR3	YFR029W	TY1B-A	O13527	1196 aa	Known RBP	4.91	□□□□□ -1.62
PTR3	YFR029W	SPT2	P06843	333 aa	Predicted RBP	4.91	□□□□□ -1.62
PTR3	YFR029W	MSH2	P25847	964 aa		4.91	□□□□□ -1.62
PTR3	YFR029W	STE5	P32917	917 aa		4.91	□□□□□ -1.62
PTR3	YFR029W	EXO84	P38261	753 aa		4.91	□□□□□ -1.62
PTR3	YFR029W	PAC1	P39946	494 aa	Known RBP	4.91	□□□□□ -1.62
PTR3	YFR029W	YNL034W	P53963	612 aa		4.91	□□□□□ -1.62
PTR3	YFR029W	YNL018C	P53976	612 aa		4.91	□□□□□ -1.62
PTR3	YFR029W	YNL011C	P53980	444 aa		4.91	□□□□□ -1.62
PTR3	YFR029W	VMS1	Q04311	632 aa	Known RBP	4.91	□□□□□ -1.62
PTR3	YFR029W	IRC3	Q06683	689 aa		4.91	□□□□□ -1.62
PTR3	YFR029W	MPD2	Q99316	277 aa		4.91	□□□□□ -1.62
PTR3	YFR029W	ATP4	P05626	244 aa		4.9	□□□□□ -1.62
PTR3	YFR029W	YFL034W	P43564	1073 aa		4.9	□□□□□ -1.62
PTR3	YFR029W	NMA111	P53920	997 aa		4.9	□□□□□ -1.62
PTR3	YFR029W	RSC4	Q02206	625 aa		4.9	□□□□□ -1.62
PTR3	YFR029W	ESC2	Q06340	456 aa		4.9	□□□□□ -1.62
PTR3	YFR029W	TDA5	Q06417	326 aa	Known RBP	4.9	□□□□□ -1.62
PTR3	YFR029W	ALR1	Q08269	859 aa		4.9	□□□□□ -1.62
PTR3	YFR029W	NYV1	Q12255	253 aa		4.9	□□□□□ -1.62
PTR3	YFR029W	PGI1	P12709	554 aa	Known RBP	4.9	□□□□□ -1.63
PTR3	YFR029W	CDC34	P14682	295 aa		4.9	□□□□□ -1.63
PTR3	YFR029W	YEF3	P16521	1044 aa	Known RBP	4.9	□□□□□ -1.63
PTR3	YFR029W	HXT5	P38695	592 aa		4.9	□□□□□ -1.63
PTR3	YFR029W	COG6	P53959	839 aa		4.9	□□□□□ -1.63
PTR3	YFR029W	ELP4	Q02884	456 aa	Known RBP	4.9	□□□□□ -1.63
PTR3	YFR029W	NAN1	Q02931	896 aa	Known RBP	4.9	□□□□□ -1.63
PTR3	YFR029W	PML39	Q03760	334 aa		4.9	□□□□□ -1.63
PTR3	YFR029W	OPI10	Q08202	246 aa		4.9	□□□□□ -1.63
PTR3	YFR029W	BDS1	Q08347	646 aa		4.9	□□□□□ -1.63
PTR3	YFR029W	RPS6A	P0CX37	236 aa	Known RBP	4.89	□□□□□ -1.63
PTR3	YFR029W	RPS6B	P0CX38	236 aa	Predicted RBP	4.89	□□□□□ -1.63
PTR3	YFR029W	YGR237C	P50089	785 aa		4.89	□□□□□ -1.63
PTR3	YFR029W	TLG1	Q03322	224 aa		4.89	□□□□□ -1.63
PTR3	YFR029W	YOL087C	Q99247	1116 aa		4.89	□□□□□ -1.63
PTR3	YFR029W	SWI5	P08153	709 aa		4.89	□□□□□ -1.63
PTR3	YFR029W	HOM3	P10869	527 aa		4.89	□□□□□ -1.63
PTR3	YFR029W	APA1	P16550	321 aa	Known RBP	4.89	□□□□□ -1.63
PTR3	YFR029W	NPR1	P22211	790 aa		4.89	□□□□□ -1.63
PTR3	YFR029W	RKM3	P38222	552 aa		4.89	□□□□□ -1.63
PTR3	YFR029W	NDE1	P40215	560 aa		4.89	□□□□□ -1.63
PTR3	YFR029W	CAN1	P04817	590 aa		4.88	□□□□□ -1.63
PTR3	YFR029W	TPD3	P31383	635 aa		4.88	□□□□□ -1.63
PTR3	YFR029W	HSE1	P38753	452 aa		4.88	□□□□□ -1.63
PTR3	YFR029W	UBX4	P54730	416 aa		4.88	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 37.1 ms