RNA–Protein interactions for RNA: YER032W

FIR1, Transcript of Protein involved in 3' mRNA processing, yeast

Gene FIR1, Length 2,631 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FIR1	YER032W	CAN1	P04817	590 aa		3.11	□□□□□ -1.91
FIR1	YER032W	HSP60	P19882	572 aa	Known RBP	3.11	□□□□□ -1.91
FIR1	YER032W	KIP2	P28743	706 aa		3.11	□□□□□ -1.91
FIR1	YER032W	YKL222C	P35995	705 aa		3.11	□□□□□ -1.91
FIR1	YER032W	HAL5	P38970	855 aa	Known RBP	3.11	□□□□□ -1.91
FIR1	YER032W	STR2	P47164	639 aa		3.11	□□□□□ -1.91
FIR1	YER032W	SUT1	P53032	299 aa	Known RBP	3.11	□□□□□ -1.91
FIR1	YER032W	UBX4	P54730	416 aa		3.11	□□□□□ -1.91
FIR1	YER032W	ALO1	P54783	526 aa	Known RBP	3.11	□□□□□ -1.91
FIR1	YER032W	TFB2	Q02939	513 aa		3.11	□□□□□ -1.91
FIR1	YER032W	BSC2	Q05611	235 aa		3.11	□□□□□ -1.91
FIR1	YER032W	MRS6	P32864	603 aa	Known RBP	3.1	□□□□□ -1.91
FIR1	YER032W	TFC3	P34111	1160 aa		3.1	□□□□□ -1.91
FIR1	YER032W	JNM1	P36224	373 aa		3.1	□□□□□ -1.91
FIR1	YER032W	YAP1801	P38856	637 aa		3.1	□□□□□ -1.91
FIR1	YER032W	PEA2	P40091	420 aa		3.1	□□□□□ -1.91
FIR1	YER032W	MEH1	Q02205	184 aa		3.1	□□□□□ -1.91
FIR1	YER032W	CAB1	Q04430	367 aa		3.1	□□□□□ -1.91
FIR1	YER032W	DAL4	Q04895	635 aa		3.1	□□□□□ -1.91
FIR1	YER032W	ISR1	Q06098	443 aa	Known RBP	3.1	□□□□□ -1.91
FIR1	YER032W	ERF2	Q06551	359 aa		3.1	□□□□□ -1.91
FIR1	YER032W	ALR1	Q08269	859 aa		3.1	□□□□□ -1.91
FIR1	YER032W	SNU66	Q12420	587 aa	Predicted RBP	3.1	□□□□□ -1.91
FIR1	YER032W	SRF1	Q12516	437 aa		3.1	□□□□□ -1.91
FIR1	YER032W	PIF1	P07271	859 aa		3.1	□□□□□ -1.91
FIR1	YER032W	PGI1	P12709	554 aa	Known RBP	3.1	□□□□□ -1.91
FIR1	YER032W	BAS1	P22035	811 aa		3.1	□□□□□ -1.91
FIR1	YER032W	DUT1	P33317	147 aa		3.1	□□□□□ -1.91
FIR1	YER032W	HOS4	P40480	1083 aa		3.1	□□□□□ -1.91
FIR1	YER032W	ESC2	Q06340	456 aa		3.1	□□□□□ -1.91
FIR1	YER032W	HDA3	Q06623	655 aa		3.1	□□□□□ -1.91
FIR1	YER032W	YPR097W	Q06839	1073 aa		3.1	□□□□□ -1.91
FIR1	YER032W	RRI2	Q12348	645 aa		3.1	□□□□□ -1.91
FIR1	YER032W	INH1	P01097	85 aa		3.09	□□□□□ -1.91
FIR1	YER032W	MPH2	P0CD99	609 aa		3.09	□□□□□ -1.91
FIR1	YER032W	RPS6A	P0CX37	236 aa	Known RBP	3.09	□□□□□ -1.91
FIR1	YER032W	RPS6B	P0CX38	236 aa	Predicted RBP	3.09	□□□□□ -1.91
FIR1	YER032W	NUD1	P32336	851 aa		3.09	□□□□□ -1.91
FIR1	YER032W	SSH4	P32343	579 aa		3.09	□□□□□ -1.91
FIR1	YER032W	TRZ1	P36159	838 aa	Predicted RBP	3.09	□□□□□ -1.91
FIR1	YER032W	YBR184W	P38299	523 aa		3.09	□□□□□ -1.91
FIR1	YER032W	UGO1	Q03327	502 aa		3.09	□□□□□ -1.91
FIR1	YER032W	SST2	P11972	698 aa	Known RBP	3.09	□□□□□ -1.91
FIR1	YER032W	RPL8B	P29453	256 aa	Known RBP	3.09	□□□□□ -1.91
FIR1	YER032W	SMC1	P32908	1225 aa		3.09	□□□□□ -1.91
FIR1	YER032W	IXR1	P33417	597 aa		3.09	□□□□□ -1.91
FIR1	YER032W	GEM1	P39722	662 aa		3.09	□□□□□ -1.91
FIR1	YER032W	HUL4	P40985	892 aa		3.09	□□□□□ -1.91
FIR1	YER032W	PEX14	P53112	341 aa		3.09	□□□□□ -1.91
FIR1	YER032W	ERP6	P53198	216 aa		3.09	□□□□□ -1.91
FIR1	YER032W	RTT10	Q08924	1013 aa		3.09	□□□□□ -1.91
FIR1	YER032W	FAP7	Q12055	197 aa	Predicted RBP	3.09	□□□□□ -1.91
FIR1	YER032W	TY4B-P	A0A0B7P3V8	1104 aa		3.08	□□□□□ -1.92
FIR1	YER032W	HSC82	P15108	705 aa	Known RBP	3.08	□□□□□ -1.92
FIR1	YER032W	KTR2	P33550	425 aa		3.08	□□□□□ -1.92
FIR1	YER032W	GPP1	P41277	250 aa	Known RBP	3.08	□□□□□ -1.92
FIR1	YER032W	UME1	Q03010	460 aa		3.08	□□□□□ -1.92
FIR1	YER032W	TY4A-H	Q6Q5P6	413 aa		3.08	□□□□□ -1.92
FIR1	YER032W	FOB1	O13329	566 aa		3.08	□□□□□ -1.92
FIR1	YER032W	KAR2	P16474	682 aa	Known RBP	3.08	□□□□□ -1.92
FIR1	YER032W	ARE1	P25628	610 aa		3.08	□□□□□ -1.92
FIR1	YER032W	SWI3	P32591	825 aa		3.08	□□□□□ -1.92
FIR1	YER032W	STE5	P32917	917 aa		3.08	□□□□□ -1.92
FIR1	YER032W	NPL4	P33755	580 aa		3.08	□□□□□ -1.92
FIR1	YER032W	PTH2	P34222	208 aa		3.08	□□□□□ -1.92
FIR1	YER032W	YEL023C	P39992	682 aa		3.08	□□□□□ -1.92
FIR1	YER032W	SPC105	P53148	917 aa		3.08	□□□□□ -1.92
FIR1	YER032W	CWC22	P53333	577 aa	Known RBP	3.08	□□□□□ -1.92
FIR1	YER032W	COG6	P53959	839 aa		3.08	□□□□□ -1.92
FIR1	YER032W	EAF1	Q06337	982 aa		3.08	□□□□□ -1.92
FIR1	YER032W	THI73	Q07904	523 aa		3.08	□□□□□ -1.92
FIR1	YER032W	FMP25	Q08023	583 aa		3.08	□□□□□ -1.92
FIR1	YER032W	RTP1	Q12751	981 aa		3.08	□□□□□ -1.92
FIR1	YER032W	MPD2	Q99316	277 aa		3.08	□□□□□ -1.92
FIR1	YER032W	TRP5	P00931	707 aa	Known RBP	3.07	□□□□□ -1.92
FIR1	YER032W	PRP40	P33203	583 aa	Known RBP	3.07	□□□□□ -1.92
FIR1	YER032W	PEX6	P33760	1030 aa		3.07	□□□□□ -1.92
FIR1	YER032W	MRP8	P35719	219 aa		3.07	□□□□□ -1.92
FIR1	YER032W	HSE1	P38753	452 aa		3.07	□□□□□ -1.92
FIR1	YER032W	GTT3	P39996	337 aa		3.07	□□□□□ -1.92
FIR1	YER032W	RSC4	Q02206	625 aa		3.07	□□□□□ -1.92
FIR1	YER032W	AGE1	Q04412	482 aa		3.07	□□□□□ -1.92
FIR1	YER032W	DPL1	Q05567	589 aa		3.07	□□□□□ -1.92
FIR1	YER032W	YCS4	Q06156	1176 aa		3.07	□□□□□ -1.92
FIR1	YER032W	RLP24	Q07915	199 aa	Known RBP	3.07	□□□□□ -1.92
FIR1	YER032W	TRE2	Q08693	809 aa		3.07	□□□□□ -1.92
FIR1	YER032W	SWI5	P08153	709 aa		3.07	□□□□□ -1.92
FIR1	YER032W	GFD2	P25370	566 aa	Known RBP	3.07	□□□□□ -1.92
FIR1	YER032W	BCK2	P33306	851 aa		3.07	□□□□□ -1.92
FIR1	YER032W	YBR071W	P38243	211 aa		3.07	□□□□□ -1.92
FIR1	YER032W	IRR1	P40541	1150 aa		3.07	□□□□□ -1.92
FIR1	YER032W	SET4	P42948	560 aa		3.07	□□□□□ -1.92
FIR1	YER032W	HSV2	P50079	448 aa	Predicted RBP	3.07	□□□□□ -1.92
FIR1	YER032W	YNL034W	P53963	612 aa		3.07	□□□□□ -1.92
FIR1	YER032W	YNL018C	P53976	612 aa		3.07	□□□□□ -1.92
FIR1	YER032W	TGL2	P54857	326 aa		3.07	□□□□□ -1.92
FIR1	YER032W	PSK2	Q08217	1101 aa		3.07	□□□□□ -1.92
FIR1	YER032W	INP54	Q08227	384 aa	Known RBP	3.07	□□□□□ -1.92
FIR1	YER032W	TAF13	P11747	167 aa		3.06	□□□□□ -1.92
FIR1	YER032W	DAL5	P15365	543 aa		3.06	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 40.5 ms