RNA–Protein interactions for RNA: YEL060C

PRB1, Transcript of Vacuolar proteinase B (yscB) with H3 N-terminal endopeptidase activity, yeastyeast

Gene PRB1, Length 1,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRB1YEL060C YJR008WP47085 338 aa8.1□□□□□ -1.11
PRB1YEL060C PUS1Q12211 544 aaKnown RBP8.1□□□□□ -1.11
PRB1YEL060C VPS38Q05919 439 aa8.09□□□□□ -1.11
PRB1YEL060C RUD3Q12234 484 aaKnown RBP8.09□□□□□ -1.11
PRB1YEL060C SAP190P36123 1033 aa8.09□□□□□ -1.11
PRB1YEL060C PXL1P36166 706 aa8.09□□□□□ -1.11
PRB1YEL060C HUL4P40985 892 aa8.09□□□□□ -1.11
PRB1YEL060C ATG36P46983 293 aa8.09□□□□□ -1.11
PRB1YEL060C SUB1P54000 292 aaKnown RBP8.09□□□□□ -1.11
PRB1YEL060C BNI1P41832 1953 aa8.09□□□□□ -1.12
PRB1YEL060C TY4B-HP0C2J7 1802 aa8.08□□□□□ -1.12
PRB1YEL060C TY4B-JP47024 1803 aa8.08□□□□□ -1.12
PRB1YEL060C ECM32P32644 1121 aaKnown RBP8.08□□□□□ -1.12
PRB1YEL060C SPT8P38915 602 aa8.08□□□□□ -1.12
PRB1YEL060C SFH1Q06168 426 aa8.08□□□□□ -1.12
PRB1YEL060C YOL098CQ12496 1037 aa8.08□□□□□ -1.12
PRB1YEL060C SEC39Q12745 709 aa8.08□□□□□ -1.12
PRB1YEL060C PEP3P27801 918 aa8.07□□□□□ -1.12
PRB1YEL060C MIF2P35201 549 aa8.07□□□□□ -1.12
PRB1YEL060C CCC2P38995 1004 aa8.07□□□□□ -1.12
PRB1YEL060C MGA2P40578 1113 aa8.07□□□□□ -1.12
PRB1YEL060C ECM23Q02710 187 aa8.07□□□□□ -1.12
PRB1YEL060C ESF1Q06344 628 aaKnown RBP8.07□□□□□ -1.12
PRB1YEL060C ALE1Q08548 619 aa8.07□□□□□ -1.12
PRB1YEL060C HIF1Q12373 385 aa8.07□□□□□ -1.12
PRB1YEL060C RGP1P16664 663 aa8.07□□□□□ -1.12
PRB1YEL060C TOA1P32773 286 aa8.07□□□□□ -1.12
PRB1YEL060C SLA1P32790 1244 aa8.07□□□□□ -1.12
PRB1YEL060C RIO2P40160 425 aaKnown RBP8.07□□□□□ -1.12
PRB1YEL060C BOP3P53958 396 aa8.07□□□□□ -1.12
PRB1YEL060C HCR1Q05775 265 aaKnown RBP8.07□□□□□ -1.12
PRB1YEL060C YOR223WQ12015 292 aa8.07□□□□□ -1.12
PRB1YEL060C PLP2Q12017 286 aa8.07□□□□□ -1.12
PRB1YEL060C HSP82P02829 709 aaKnown RBP8.06□□□□□ -1.12
PRB1YEL060C HXK1P04806 485 aaKnown RBP8.06□□□□□ -1.12
PRB1YEL060C RPL22AP05749 121 aaKnown RBP8.06□□□□□ -1.12
PRB1YEL060C ADE17P38009 592 aaKnown RBP8.06□□□□□ -1.12
PRB1YEL060C BUD16P39988 312 aa8.06□□□□□ -1.12
PRB1YEL060C EPS1P40557 701 aa8.06□□□□□ -1.12
PRB1YEL060C OSH2Q12451 1283 aa8.06□□□□□ -1.12
PRB1YEL060C IMP2'P32351 346 aa8.05□□□□□ -1.12
PRB1YEL060C HXT10P43581 546 aa8.05□□□□□ -1.12
PRB1YEL060C DOS2P54858 310 aa8.05□□□□□ -1.12
PRB1YEL060C GFD1Q04839 188 aaKnown RBP8.05□□□□□ -1.12
PRB1YEL060C FKS3Q04952 1785 aa8.05□□□□□ -1.12
PRB1YEL060C EPL1P43572 832 aa8.05□□□□□ -1.12
PRB1YEL060C VPS4P52917 437 aa8.05□□□□□ -1.12
PRB1YEL060C VTC3Q02725 835 aa8.05□□□□□ -1.12
PRB1YEL060C ARD1P07347 238 aaPredicted RBP8.04□□□□□ -1.12
PRB1YEL060C SEC23P15303 768 aaKnown RBP8.04□□□□□ -1.12
PRB1YEL060C OPI1P21957 404 aa8.04□□□□□ -1.12
PRB1YEL060C NFU1P32860 256 aa8.04□□□□□ -1.12
PRB1YEL060C OSH3P38713 996 aaKnown RBP8.04□□□□□ -1.12
PRB1YEL060C VPS8P39702 1274 aa8.04□□□□□ -1.12
PRB1YEL060C MIC19P43594 170 aa8.04□□□□□ -1.12
PRB1YEL060C YDR338CQ05497 695 aa8.04□□□□□ -1.12
PRB1YEL060C VAC14Q06708 880 aa8.04□□□□□ -1.12
PRB1YEL060C SSK22P25390 1331 aaPredicted RBP8.04□□□□□ -1.12
PRB1YEL060C SET1P38827 1080 aaKnown RBP8.03□□□□□ -1.12
PRB1YEL060C YJR079WP47126 109 aa8.03□□□□□ -1.12
PRB1YEL060C TPO2P53283 614 aa8.03□□□□□ -1.12
PRB1YEL060C YML020WQ03722 664 aa8.03□□□□□ -1.12
PRB1YEL060C SDH5Q08230 162 aa8.03□□□□□ -1.12
PRB1YEL060C RAD3P06839 778 aa8.03□□□□□ -1.12
PRB1YEL060C PRP16P15938 1071 aaPredicted RBP8.03□□□□□ -1.12
PRB1YEL060C DIT2P21595 489 aa8.03□□□□□ -1.12
PRB1YEL060C SEC65P29478 273 aa8.03□□□□□ -1.12
PRB1YEL060C RCR1P38212 213 aa8.03□□□□□ -1.12
PRB1YEL060C MCX1P38323 520 aaPredicted RBP8.03□□□□□ -1.12
PRB1YEL060C MAK10Q02197 733 aa8.03□□□□□ -1.12
PRB1YEL060C INP54Q08227 384 aaKnown RBP8.03□□□□□ -1.12
PRB1YEL060C AFT2Q08957 416 aa8.03□□□□□ -1.12
PRB1YEL060C RAD1P06777 1100 aa8.02□□□□□ -1.13
PRB1YEL060C DAL7P21826 554 aa8.02□□□□□ -1.13
PRB1YEL060C ASF1P32447 279 aa8.02□□□□□ -1.13
PRB1YEL060C SAC6P32599 642 aaKnown RBP8.02□□□□□ -1.13
PRB1YEL060C EFM2P38347 419 aa8.02□□□□□ -1.13
PRB1YEL060C SMF1P38925 575 aa8.02□□□□□ -1.13
PRB1YEL060C MEC3Q02574 474 aa8.02□□□□□ -1.13
PRB1YEL060C VPS64Q03944 604 aa8.02□□□□□ -1.13
PRB1YEL060C STE23Q06010 1027 aa8.02□□□□□ -1.13
PRB1YEL060C SPT5P27692 1063 aaKnown RBP8.01□□□□□ -1.13
PRB1YEL060C CNS1P33313 385 aa8.01□□□□□ -1.13
PRB1YEL060C CBF5P33322 483 aaKnown RBP RIP-Chip data8.01□□□□□ -1.13not detected
PRB1YEL060C NUR1Q12066 484 aa8.01□□□□□ -1.13
PRB1YEL060C SLM3Q12093 417 aa8.01□□□□□ -1.13
PRB1YEL060C PRE10P21242 288 aaKnown RBP RIP-Chip data8.01□□□□□ -1.13not detected
PRB1YEL060C CBP3P21560 335 aa8.01□□□□□ -1.13
PRB1YEL060C CDC60P26637 1090 aaKnown RBP8.01□□□□□ -1.13
PRB1YEL060C SHM1P37292 490 aaPredicted RBP8.01□□□□□ -1.13
PRB1YEL060C YSW1P38280 609 aa8.01□□□□□ -1.13
PRB1YEL060C YNL011CP53980 444 aa8.01□□□□□ -1.13
PRB1YEL060C ERG5P54781 538 aa8.01□□□□□ -1.13
PRB1YEL060C NOP6Q07623 225 aaKnown RBP8.01□□□□□ -1.13
PRB1YEL060C HMI1Q12039 706 aa8.01□□□□□ -1.13
PRB1YEL060C GYP5Q12344 894 aa8.01□□□□□ -1.13
PRB1YEL060C AI2P03876 854 aa8□□□□□ -1.13
PRB1YEL060C ZUO1P32527 433 aaKnown RBP8□□□□□ -1.13
PRB1YEL060C HEL1P36113 551 aa8□□□□□ -1.13
PRB1YEL060C PTC4P38089 393 aa8□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 43.7 ms