RNA–Protein interactions for RNA: YDR452W

PPN1, Transcript of Vacuolar endopolyphosphatase with a role in phosphate metabolism, yeast

Gene PPN1, Length 2,025 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PPN1	YDR452W	PYC2	P32327	1180 aa	Known RBP	4.97	□□□□□ -1.61
PPN1	YDR452W	SFA1	P32771	386 aa		4.97	□□□□□ -1.61
PPN1	YDR452W	PGM1	P33401	570 aa	Known RBP	4.97	□□□□□ -1.61
PPN1	YDR452W	PAN5	P38787	379 aa		4.97	□□□□□ -1.61
PPN1	YDR452W	ATG1	P53104	897 aa		4.97	□□□□□ -1.61
PPN1	YDR452W	CTR9	P89105	1077 aa		4.97	□□□□□ -1.61
PPN1	YDR452W	COB	P00163	385 aa		4.97	□□□□□ -1.61
PPN1	YDR452W	TRL1	P09880	827 aa	Known RBP	4.97	□□□□□ -1.61
PPN1	YDR452W	HVG1	P0CE11	249 aa		4.97	□□□□□ -1.61
PPN1	YDR452W	SBP1	P10080	294 aa	Known RBP	4.97	□□□□□ -1.61
PPN1	YDR452W	YBR287W	P38355	427 aa		4.97	□□□□□ -1.61
PPN1	YDR452W	ARI1	P53111	347 aa	Known RBP	4.96	□□□□□ -1.62
PPN1	YDR452W	GLO4	Q12320	285 aa		4.96	□□□□□ -1.62
PPN1	YDR452W	GEF1	P37020	779 aa		4.95	□□□□□ -1.62
PPN1	YDR452W	YJR124C	P47159	448 aa		4.95	□□□□□ -1.62
PPN1	YDR452W	GUP1	P53154	560 aa		4.95	□□□□□ -1.62
PPN1	YDR452W	YNR065C	P53751	1116 aa		4.95	□□□□□ -1.62
PPN1	YDR452W	MNL2	Q12205	849 aa		4.95	□□□□□ -1.62
PPN1	YDR452W	POL5	P39985	1022 aa	Known RBP	4.94	□□□□□ -1.62
PPN1	YDR452W	CDC3	P32457	520 aa	Known RBP	4.94	□□□□□ -1.62
PPN1	YDR452W	ERP5	P38819	212 aa		4.94	□□□□□ -1.62
PPN1	YDR452W	UFD2	P54860	961 aa		4.94	□□□□□ -1.62
PPN1	YDR452W	DUR3	P33413	735 aa		4.93	□□□□□ -1.62
PPN1	YDR452W	ACF4	P47129	309 aa		4.93	□□□□□ -1.62
PPN1	YDR452W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.93	□□□□□ -1.62	not detected
PPN1	YDR452W	RSC4	Q02206	625 aa		4.93	□□□□□ -1.62
PPN1	YDR452W	HAS1	Q03532	505 aa	Known RBP	4.93	□□□□□ -1.62
PPN1	YDR452W	GRS1	P38088	690 aa	Known RBP	4.92	□□□□□ -1.62
PPN1	YDR452W	MDJ2	P42834	146 aa		4.92	□□□□□ -1.62
PPN1	YDR452W	DSE4	P53753	1117 aa		4.92	□□□□□ -1.62
PPN1	YDR452W	NEO1	P40527	1151 aa		4.92	□□□□□ -1.62
PPN1	YDR452W	TRS120	Q04183	1289 aa		4.92	□□□□□ -1.62
PPN1	YDR452W	YBL113C	Q7M4S9	792 aa		4.92	□□□□□ -1.62
PPN1	YDR452W	FRT1	Q99332	602 aa		4.92	□□□□□ -1.62
PPN1	YDR452W	ERS1	P17261	260 aa		4.91	□□□□□ -1.62
PPN1	YDR452W	RSC6	P25632	483 aa		4.91	□□□□□ -1.62
PPN1	YDR452W	REC8	Q12188	680 aa		4.91	□□□□□ -1.62
PPN1	YDR452W	LEM3	P42838	414 aa		4.9	□□□□□ -1.62
PPN1	YDR452W	ALO1	P54783	526 aa	Known RBP	4.9	□□□□□ -1.62
PPN1	YDR452W	YLR122C	Q12312	125 aa		4.9	□□□□□ -1.62
PPN1	YDR452W	HAT1	Q12341	374 aa		4.9	□□□□□ -1.62
PPN1	YDR452W	GLT1	Q12680	2145 aa	Known RBP	4.9	□□□□□ -1.63
PPN1	YDR452W	NAM7	P30771	971 aa	Known RBP	4.9	□□□□□ -1.63
PPN1	YDR452W	SPO71	Q03868	1245 aa		4.9	□□□□□ -1.63
PPN1	YDR452W	GPI13	Q07830	1017 aa		4.9	□□□□□ -1.63
PPN1	YDR452W	ELG1	Q12050	791 aa		4.9	□□□□□ -1.63
PPN1	YDR452W	AKR1	P39010	764 aa		4.89	□□□□□ -1.63
PPN1	YDR452W	FET4	P40988	552 aa		4.89	□□□□□ -1.63
PPN1	YDR452W	NCE103	P53615	221 aa		4.89	□□□□□ -1.63
PPN1	YDR452W	RIM11	P38615	370 aa		4.89	□□□□□ -1.63
PPN1	YDR452W	NUT2	Q06213	157 aa		4.89	□□□□□ -1.63
PPN1	YDR452W	CMR1	Q12510	522 aa	Known RBP	4.89	□□□□□ -1.63
PPN1	YDR452W	TRP3	P00937	484 aa		4.88	□□□□□ -1.63
PPN1	YDR452W	MAE1	P36013	669 aa	Known RBP	4.88	□□□□□ -1.63
PPN1	YDR452W	YNL011C	P53980	444 aa		4.88	□□□□□ -1.63
PPN1	YDR452W	COQ2	P32378	372 aa		4.87	□□□□□ -1.63
PPN1	YDR452W	YKR073C	P36153	106 aa		4.87	□□□□□ -1.63
PPN1	YDR452W	SAF1	P38352	637 aa		4.87	□□□□□ -1.63
PPN1	YDR452W	INP52	P50942	1183 aa		4.87	□□□□□ -1.63
PPN1	YDR452W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
PPN1	YDR452W	KIP3	P53086	805 aa	Known RBP	4.87	□□□□□ -1.63
PPN1	YDR452W	CDC55	Q00362	526 aa		4.87	□□□□□ -1.63
PPN1	YDR452W	BSC2	Q05611	235 aa		4.87	□□□□□ -1.63
PPN1	YDR452W	NPR1	P22211	790 aa		4.86	□□□□□ -1.63
PPN1	YDR452W	MSH6	Q03834	1242 aa		4.86	□□□□□ -1.63
PPN1	YDR452W	FLP1	P03870	423 aa		4.85	□□□□□ -1.63
PPN1	YDR452W	KAE1	P36132	386 aa		4.85	□□□□□ -1.63
PPN1	YDR452W	PRP5	P21372	849 aa	Predicted RBP	4.85	□□□□□ -1.63
PPN1	YDR452W	OMA1	P36163	345 aa		4.85	□□□□□ -1.63
PPN1	YDR452W	MAC1	P35192	417 aa		4.84	□□□□□ -1.63
PPN1	YDR452W	HTS1	P07263	546 aa	Known RBP	4.84	□□□□□ -1.64
PPN1	YDR452W	YHL008C	P38750	627 aa		4.84	□□□□□ -1.64
PPN1	YDR452W	SAP155	P43612	1002 aa		4.84	□□□□□ -1.64
PPN1	YDR452W	YGR130C	P53278	816 aa		4.84	□□□□□ -1.64
PPN1	YDR452W	INP54	Q08227	384 aa	Known RBP	4.83	□□□□□ -1.64
PPN1	YDR452W	CHS2	P14180	963 aa		4.82	□□□□□ -1.64
PPN1	YDR452W	YHL050C	P38721	697 aa		4.82	□□□□□ -1.64
PPN1	YDR452W	YHR219W	P38900	624 aa		4.82	□□□□□ -1.64
PPN1	YDR452W	NUT1	P53114	1132 aa		4.82	□□□□□ -1.64
PPN1	YDR452W	MED7	Q08278	222 aa		4.82	□□□□□ -1.64
PPN1	YDR452W	YIG1	Q08956	461 aa		4.82	□□□□□ -1.64
PPN1	YDR452W	TOS1	P38288	455 aa		4.82	□□□□□ -1.64
PPN1	YDR452W	SSF1	P38789	453 aa	Predicted RBP	4.82	□□□□□ -1.64
PPN1	YDR452W	CTH1	P47976	325 aa		4.82	□□□□□ -1.64
PPN1	YDR452W	ECM2	P38241	364 aa	Known RBP	4.81	□□□□□ -1.64
PPN1	YDR452W	YMR074C	Q04773	145 aa		4.81	□□□□□ -1.64
PPN1	YDR452W	MON1	P53129	644 aa		4.8	□□□□□ -1.64
PPN1	YDR452W	FAR11	P53917	953 aa		4.8	□□□□□ -1.64
PPN1	YDR452W	YOR223W	Q12015	292 aa		4.8	□□□□□ -1.64
PPN1	YDR452W	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.8	□□□□□ -1.64
PPN1	YDR452W	TY1A-DR6	P0CX70	440 aa		4.8	□□□□□ -1.64
PPN1	YDR452W	TY1A-ER1	P0CX71	440 aa		4.8	□□□□□ -1.64
PPN1	YDR452W	TY1A-LR2	P0CX72	440 aa		4.8	□□□□□ -1.64
PPN1	YDR452W	TY1A-PL	P0CX73	440 aa		4.8	□□□□□ -1.64
PPN1	YDR452W	TY1A-JR1	P0CX74	440 aa		4.8	□□□□□ -1.64
PPN1	YDR452W	TY1A-LR3	P0CX75	440 aa		4.8	□□□□□ -1.64
PPN1	YDR452W	TY1A-ML2	P0CX76	440 aa		4.8	□□□□□ -1.64
PPN1	YDR452W	GPT2	P36148	743 aa		4.8	□□□□□ -1.64
PPN1	YDR452W	SEA4	P38164	1038 aa		4.8	□□□□□ -1.64
PPN1	YDR452W	YAF9	P53930	226 aa		4.8	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms