RNA–Protein interactions for RNA: YDR288W

NSE3, Transcript of Component of the SMC5-SMC6 complex, yeast

Gene NSE3, Length 912 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NSE3	YDR288W	PEP7	P32609	515 aa		7.09	□□□□□ -1.27
NSE3	YDR288W	YCS4	Q06156	1176 aa		7.09	□□□□□ -1.27
NSE3	YDR288W	MCM2	P29469	868 aa		7.08	□□□□□ -1.28
NSE3	YDR288W	DAL4	Q04895	635 aa		7.08	□□□□□ -1.28
NSE3	YDR288W	SYT1	Q06836	1226 aa		7.08	□□□□□ -1.28
NSE3	YDR288W	KAR2	P16474	682 aa	Known RBP	7.07	□□□□□ -1.28
NSE3	YDR288W	MSC7	P38694	644 aa		7.07	□□□□□ -1.28
NSE3	YDR288W	RPS26A	P39938	119 aa	Known RBP	7.07	□□□□□ -1.28
NSE3	YDR288W	RPS26B	P39939	119 aa	Known RBP	7.07	□□□□□ -1.28
NSE3	YDR288W	SVF1	Q05515	481 aa		7.07	□□□□□ -1.28
NSE3	YDR288W	PAM1	P37304	830 aa	Known RBP	7.06	□□□□□ -1.28
NSE3	YDR288W	FYV10	P40492	516 aa		7.06	□□□□□ -1.28
NSE3	YDR288W	LYS5	P50113	272 aa		7.06	□□□□□ -1.28
NSE3	YDR288W	MON1	P53129	644 aa		7.06	□□□□□ -1.28
NSE3	YDR288W	CTR9	P89105	1077 aa		7.06	□□□□□ -1.28
NSE3	YDR288W	TY1A-DR2	Q03964	440 aa	Known RBP	7.06	□□□□□ -1.28
NSE3	YDR288W	FUS1	P11710	512 aa		7.05	□□□□□ -1.28
NSE3	YDR288W	NAP1	P25293	417 aa	Known RBP	7.05	□□□□□ -1.28
NSE3	YDR288W	PRP40	P33203	583 aa	Known RBP	7.05	□□□□□ -1.28
NSE3	YDR288W	RVS167	P39743	482 aa	Known RBP	7.05	□□□□□ -1.28
NSE3	YDR288W	PRK1	P40494	810 aa		7.05	□□□□□ -1.28
NSE3	YDR288W	YGR122W	P53272	402 aa		7.05	□□□□□ -1.28
NSE3	YDR288W	SPR28	Q04921	423 aa		7.05	□□□□□ -1.28
NSE3	YDR288W	NUT1	P53114	1132 aa		7.04	□□□□□ -1.28
NSE3	YDR288W	MCM5	P29496	775 aa	Known RBP	7.03	□□□□□ -1.28
NSE3	YDR288W	INP51	P40559	946 aa	Known RBP	7.03	□□□□□ -1.28
NSE3	YDR288W	MRPS18	P42847	217 aa		7.03	□□□□□ -1.28
NSE3	YDR288W	JIP5	Q06214	492 aa	Predicted RBP	7.03	□□□□□ -1.28
NSE3	YDR288W	PMT7	Q06644	662 aa		7.03	□□□□□ -1.28
NSE3	YDR288W	COB	P00163	385 aa		7.02	□□□□□ -1.29
NSE3	YDR288W	RMD1	Q03441	430 aa		7.02	□□□□□ -1.29
NSE3	YDR288W	MSH6	Q03834	1242 aa		7.02	□□□□□ -1.29
NSE3	YDR288W	ESF1	Q06344	628 aa	Known RBP	7.02	□□□□□ -1.29
NSE3	YDR288W	CYC8	P14922	966 aa		7.01	□□□□□ -1.29
NSE3	YDR288W	PRE9	P23638	258 aa	Known RBP	7.01	□□□□□ -1.29
NSE3	YDR288W	FAA3	P39002	694 aa		7.01	□□□□□ -1.29
NSE3	YDR288W	ALD3	P54114	506 aa		7.01	□□□□□ -1.29
NSE3	YDR288W	YDL176W	Q12027	708 aa		7.01	□□□□□ -1.29
NSE3	YDR288W	HXK1	P04806	485 aa	Known RBP	7	□□□□□ -1.29
NSE3	YDR288W	RAD2	P07276	1031 aa		7	□□□□□ -1.29
NSE3	YDR288W	RSM26	P47141	266 aa		7	□□□□□ -1.29
NSE3	YDR288W	YGR035C	P53222	116 aa		7	□□□□□ -1.29
NSE3	YDR288W	TOS4	Q06266	489 aa		7	□□□□□ -1.29
NSE3	YDR288W	MCD1	Q12158	566 aa		7	□□□□□ -1.29
NSE3	YDR288W	MRP10	O75012	95 aa		6.99	□□□□□ -1.29
NSE3	YDR288W	DUR3	P33413	735 aa		6.99	□□□□□ -1.29
NSE3	YDR288W	SQT1	P35184	431 aa		6.99	□□□□□ -1.29
NSE3	YDR288W	BIO5	P53744	561 aa	Known RBP	6.99	□□□□□ -1.29
NSE3	YDR288W	ULP1	Q02724	621 aa		6.99	□□□□□ -1.29
NSE3	YDR288W	HPF1	Q05164	967 aa		6.99	□□□□□ -1.29
NSE3	YDR288W	GLO4	Q12320	285 aa		6.99	□□□□□ -1.29
NSE3	YDR288W	DPH6	Q12429	685 aa		6.99	□□□□□ -1.29
NSE3	YDR288W	PDC5	P16467	563 aa	Known RBP	6.98	□□□□□ -1.29
NSE3	YDR288W	NPR1	P22211	790 aa		6.98	□□□□□ -1.29
NSE3	YDR288W	MAD1	P40957	749 aa		6.98	□□□□□ -1.29
NSE3	YDR288W	YJR124C	P47159	448 aa		6.98	□□□□□ -1.29
NSE3	YDR288W	GPM1	P00950	247 aa	Known RBP	6.97	□□□□□ -1.29
NSE3	YDR288W	KNS1	P32350	737 aa	Predicted RBP	6.97	□□□□□ -1.29
NSE3	YDR288W	UGA4	P32837	571 aa		6.97	□□□□□ -1.29
NSE3	YDR288W	SHU2	P38957	223 aa		6.97	□□□□□ -1.29
NSE3	YDR288W	NEO1	P40527	1151 aa		6.97	□□□□□ -1.29
NSE3	YDR288W	FET4	P40988	552 aa		6.97	□□□□□ -1.29
NSE3	YDR288W	SOK2	P53438	785 aa	Predicted RBP	6.97	□□□□□ -1.29
NSE3	YDR288W	YAF9	P53930	226 aa		6.97	□□□□□ -1.29
NSE3	YDR288W	SOG2	Q08817	791 aa		6.97	□□□□□ -1.29
NSE3	YDR288W	CMR1	Q12510	522 aa	Known RBP	6.97	□□□□□ -1.29
NSE3	YDR288W	PET112	P33893	541 aa		6.96	□□□□□ -1.3
NSE3	YDR288W	RIM11	P38615	370 aa		6.96	□□□□□ -1.3
NSE3	YDR288W	LSB6	P42951	607 aa		6.96	□□□□□ -1.3
NSE3	YDR288W	SAP155	P43612	1002 aa		6.96	□□□□□ -1.3
NSE3	YDR288W	JJJ3	P47138	172 aa		6.96	□□□□□ -1.3
NSE3	YDR288W	GUP1	P53154	560 aa		6.96	□□□□□ -1.3
NSE3	YDR288W	ADI1	Q03677	179 aa		6.96	□□□□□ -1.3
NSE3	YDR288W	CLN2	P20438	545 aa		6.95	□□□□□ -1.3
NSE3	YDR288W	TFA2	P36145	328 aa		6.95	□□□□□ -1.3
NSE3	YDR288W	ALG14	P38242	237 aa		6.95	□□□□□ -1.3
NSE3	YDR288W	LEM3	P42838	414 aa		6.95	□□□□□ -1.3
NSE3	YDR288W	YNR065C	P53751	1116 aa		6.95	□□□□□ -1.3
NSE3	YDR288W	PEX13	P80667	386 aa		6.95	□□□□□ -1.3
NSE3	YDR288W	YPL109C	Q02981	657 aa		6.95	□□□□□ -1.3
NSE3	YDR288W	YKL077W	P36081	392 aa		6.94	□□□□□ -1.3
NSE3	YDR288W	PRP5	P21372	849 aa	Predicted RBP	6.92	□□□□□ -1.3
NSE3	YDR288W	PGM2	P37012	569 aa	Known RBP	6.92	□□□□□ -1.3
NSE3	YDR288W	GIP2	P40036	548 aa		6.92	□□□□□ -1.3
NSE3	YDR288W	CWC24	P53769	259 aa		6.92	□□□□□ -1.3
NSE3	YDR288W	GIS4	Q04233	774 aa		6.92	□□□□□ -1.3
NSE3	YDR288W	NAR1	P23503	491 aa	Known RBP	6.91	□□□□□ -1.3
NSE3	YDR288W	AMN1	P38285	549 aa	Predicted RBP	6.91	□□□□□ -1.3
NSE3	YDR288W	SLP1	Q12232	587 aa		6.91	□□□□□ -1.3
NSE3	YDR288W	NHA1	Q99271	985 aa		6.91	□□□□□ -1.3
NSE3	YDR288W	HTS1	P07263	546 aa	Known RBP	6.9	□□□□□ -1.3
NSE3	YDR288W	HVG1	P0CE11	249 aa		6.9	□□□□□ -1.3
NSE3	YDR288W	MNR2	P35724	969 aa		6.9	□□□□□ -1.3
NSE3	YDR288W	PEX28	P38848	579 aa		6.9	□□□□□ -1.3
NSE3	YDR288W	TED1	P40533	473 aa		6.9	□□□□□ -1.3
NSE3	YDR288W	HAS1	Q03532	505 aa	Known RBP	6.9	□□□□□ -1.3
NSE3	YDR288W	SPO71	Q03868	1245 aa		6.9	□□□□□ -1.3
NSE3	YDR288W	SAC7	P17121	654 aa		6.89	□□□□□ -1.31
NSE3	YDR288W	MSH3	P25336	1018 aa		6.89	□□□□□ -1.31
NSE3	YDR288W	ATG14	P38270	344 aa		6.88	□□□□□ -1.31

Retrieved 100 of 5,963 RNA–protein pairs in 31.6 ms