RNA–Protein interactions for RNA: YDR227W

SIR4, Transcript of SIR protein involved in assembly of silent chromatin domains, yeastyeast

Gene SIR4, Length 4,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR4YDR227W FAA4P47912 694 aaKnown RBP2.66□□□□□ -1.98
SIR4YDR227W COG4Q06096 861 aa2.66□□□□□ -1.98
SIR4YDR227W HVG1P0CE11 249 aa2.65□□□□□ -1.98
SIR4YDR227W IDI1P15496 288 aa2.65□□□□□ -1.98
SIR4YDR227W ATE1P16639 503 aa2.65□□□□□ -1.98
SIR4YDR227W SUI2P20459 304 aaKnown RBP2.65□□□□□ -1.98
SIR4YDR227W HXT5P38695 592 aa2.65□□□□□ -1.98
SIR4YDR227W RAT1Q02792 1006 aaKnown RBP2.65□□□□□ -1.98
SIR4YDR227W ATG13Q06628 738 aa2.65□□□□□ -1.98
SIR4YDR227W NHA1Q99271 985 aa2.65□□□□□ -1.98
SIR4YDR227W PAF1P38351 445 aa2.65□□□□□ -1.99
SIR4YDR227W DOT6P40059 670 aaKnown RBP2.65□□□□□ -1.99
SIR4YDR227W UBA2P52488 636 aa2.65□□□□□ -1.99
SIR4YDR227W PUN1Q06991 263 aa2.65□□□□□ -1.99
SIR4YDR227W YOL036WQ08206 761 aa2.65□□□□□ -1.99
SIR4YDR227W YRF1-4O13559 1382 aa2.65□□□□□ -1.99
SIR4YDR227W CYB2P00175 591 aa2.65□□□□□ -1.99
SIR4YDR227W STF1P01098 86 aa2.65□□□□□ -1.99
SIR4YDR227W DBP1P24784 617 aaKnown RBP2.65□□□□□ -1.99
SIR4YDR227W COQ8P27697 501 aa2.65□□□□□ -1.99
SIR4YDR227W PEA2P40091 420 aa2.65□□□□□ -1.99
SIR4YDR227W YIL089WP40500 205 aa2.65□□□□□ -1.99
SIR4YDR227W YMR018WQ04364 514 aa2.65□□□□□ -1.99
SIR4YDR227W ATG20Q07528 640 aa2.65□□□□□ -1.99
SIR4YDR227W MAK21Q12176 1025 aaKnown RBP2.65□□□□□ -1.99
SIR4YDR227W APE3P37302 537 aaKnown RBP2.64□□□□□ -1.99
SIR4YDR227W ULI1P43604 169 aa2.64□□□□□ -1.99
SIR4YDR227W WSC3Q12215 556 aa2.64□□□□□ -1.99
SIR4YDR227W ERP4Q12450 207 aa2.64□□□□□ -1.99
SIR4YDR227W FPR3P38911 411 aaKnown RBP2.64□□□□□ -1.99
SIR4YDR227W RIA1P53893 1110 aa2.64□□□□□ -1.99
SIR4YDR227W RBA50Q04418 439 aa2.64□□□□□ -1.99
SIR4YDR227W PHM6Q05637 104 aa2.64□□□□□ -1.99
SIR4YDR227W ICL2Q12031 575 aa2.64□□□□□ -1.99
SIR4YDR227W SSF2Q12153 453 aaPredicted RBP2.64□□□□□ -1.99
SIR4YDR227W AIM7Q12156 149 aa2.64□□□□□ -1.99
SIR4YDR227W CDC60P26637 1090 aaKnown RBP2.64□□□□□ -1.99
SIR4YDR227W YJR142WP47173 342 aa2.64□□□□□ -1.99
SIR4YDR227W YGL081WP53156 320 aa2.64□□□□□ -1.99
SIR4YDR227W VMS1Q04311 632 aaKnown RBP2.64□□□□□ -1.99
SIR4YDR227W PUP1P25043 261 aa2.63□□□□□ -1.99
SIR4YDR227W RFC1P38630 861 aaKnown RBP2.63□□□□□ -1.99
SIR4YDR227W HUL5P53119 910 aa2.63□□□□□ -1.99
SIR4YDR227W TAF8Q03750 510 aa2.63□□□□□ -1.99
SIR4YDR227W NCR1Q12200 1170 aa2.63□□□□□ -1.99
SIR4YDR227W FUR4P05316 633 aaKnown RBP2.63□□□□□ -1.99
SIR4YDR227W YJU3P28321 313 aa2.63□□□□□ -1.99
SIR4YDR227W TGL4P36165 910 aa2.63□□□□□ -1.99
SIR4YDR227W TIF5P38431 405 aaKnown RBP2.63□□□□□ -1.99
SIR4YDR227W SPR3P41901 512 aa2.63□□□□□ -1.99
SIR4YDR227W TEA1P47988 759 aa2.63□□□□□ -1.99
SIR4YDR227W ATP22P50273 684 aaPredicted RBP2.63□□□□□ -1.99
SIR4YDR227W HEL2Q05580 639 aaKnown RBP2.63□□□□□ -1.99
SIR4YDR227W CIT2P08679 460 aa2.63□□□□□ -1.99
SIR4YDR227W KEX1P09620 729 aa2.63□□□□□ -1.99
SIR4YDR227W RAD27P26793 382 aa2.63□□□□□ -1.99
SIR4YDR227W MRS6P32864 603 aaKnown RBP2.63□□□□□ -1.99
SIR4YDR227W XDJ1P39102 459 aa2.63□□□□□ -1.99
SIR4YDR227W NUP82P40368 713 aa2.63□□□□□ -1.99
SIR4YDR227W BAS1P22035 811 aa2.63□□□□□ -1.99
SIR4YDR227W PUF4P25339 888 aaKnown RBP RIP-Chip data2.63□□□□□ -1.99not detected
SIR4YDR227W TLG1Q03322 224 aa2.63□□□□□ -1.99
SIR4YDR227W TMA64Q04600 565 aaKnown RBP2.63□□□□□ -1.99
SIR4YDR227W PLP2Q12017 286 aa2.63□□□□□ -1.99
SIR4YDR227W MPD2Q99316 277 aa2.63□□□□□ -1.99
SIR4YDR227W FUI1P38196 639 aa2.62□□□□□ -1.99
SIR4YDR227W FYV10P40492 516 aa2.62□□□□□ -1.99
SIR4YDR227W PSF3Q12146 194 aa2.62□□□□□ -1.99
SIR4YDR227W TIM23P32897 222 aa2.62□□□□□ -1.99
SIR4YDR227W RPT1P33299 467 aaKnown RBP2.62□□□□□ -1.99
SIR4YDR227W BFA1P47113 574 aa2.62□□□□□ -1.99
SIR4YDR227W TDA5Q06417 326 aaKnown RBP2.62□□□□□ -1.99
SIR4YDR227W KIP2P28743 706 aa2.62□□□□□ -1.99
SIR4YDR227W PBP2P38151 413 aaKnown RBP RIP-Chip data2.62□□□□□ -1.99not detected
SIR4YDR227W POP2P39008 433 aa2.62□□□□□ -1.99
SIR4YDR227W BOI2P39969 1040 aa2.62□□□□□ -1.99
SIR4YDR227W YGR130CP53278 816 aa2.62□□□□□ -1.99
SIR4YDR227W HIM1Q06674 414 aa2.62□□□□□ -1.99
SIR4YDR227W TY4B-HP0C2J7 1802 aa2.61□□□□□ -1.99
SIR4YDR227W KRS1P15180 591 aaKnown RBP2.61□□□□□ -1.99
SIR4YDR227W CSE1P33307 960 aa2.61□□□□□ -1.99
SIR4YDR227W BUD2P33314 1104 aa2.61□□□□□ -1.99
SIR4YDR227W RPS26AP39938 119 aaKnown RBP2.61□□□□□ -1.99
SIR4YDR227W RPS26BP39939 119 aaKnown RBP2.61□□□□□ -1.99
SIR4YDR227W TAN1P53072 289 aaPredicted RBP2.61□□□□□ -1.99
SIR4YDR227W YLR225CQ05948 407 aaKnown RBP2.61□□□□□ -1.99
SIR4YDR227W RPP2BP02400 110 aaKnown RBP2.61□□□□□ -1.99
SIR4YDR227W EDS1P38073 919 aa2.61□□□□□ -1.99
SIR4YDR227W YBL029C-AQ3E756 94 aa2.61□□□□□ -1.99
SIR4YDR227W KRE5P22023 1365 aa2.61□□□□□ -1.99
SIR4YDR227W PHO8P11491 566 aa2.61□□□□□ -1.99
SIR4YDR227W TBS1P38114 1094 aa2.61□□□□□ -1.99
SIR4YDR227W MTO1P53070 669 aa2.61□□□□□ -1.99
SIR4YDR227W REC8Q12188 680 aa2.61□□□□□ -1.99
SIR4YDR227W PRE9P23638 258 aaKnown RBP2.6□□□□□ -1.99
SIR4YDR227W DSS1P39112 969 aa2.6□□□□□ -1.99
SIR4YDR227W VID27P40157 782 aa2.6□□□□□ -1.99
SIR4YDR227W TBF1Q02457 562 aa2.6□□□□□ -1.99
SIR4YDR227W GDE1Q02979 1223 aa2.6□□□□□ -1.99
SIR4YDR227W GIR2Q03768 265 aaPredicted RBP2.6□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 35.6 ms