RNA–Protein interactions for RNA: YDR194C

MSS116, Transcript of Mitochondrial transcription elongation factor, yeastyeast

Gene MSS116, Length 1,995 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSS116YDR194C GCR1P07261 785 aa7.45□□□□□ -1.22
MSS116YDR194C LDH1P38139 375 aa7.45□□□□□ -1.22
MSS116YDR194C ZDS1P50111 915 aaKnown RBP7.45□□□□□ -1.22
MSS116YDR194C YNR029CP53729 429 aaKnown RBP7.45□□□□□ -1.22
MSS116YDR194C TIF6Q12522 245 aaKnown RBP7.45□□□□□ -1.22
MSS116YDR194C SEC6P32844 805 aa7.44□□□□□ -1.22
MSS116YDR194C MKS1P34072 584 aa7.44□□□□□ -1.22
MSS116YDR194C YGR125WP53273 1036 aa7.44□□□□□ -1.22
MSS116YDR194C RTT10Q08924 1013 aa7.44□□□□□ -1.22
MSS116YDR194C STE6P12866 1290 aa7.44□□□□□ -1.22
MSS116YDR194C BAS1P22035 811 aa7.44□□□□□ -1.22
MSS116YDR194C MSN1P22148 382 aa7.44□□□□□ -1.22
MSS116YDR194C IRS4P36115 615 aaKnown RBP7.44□□□□□ -1.22
MSS116YDR194C PAF1P38351 445 aa7.44□□□□□ -1.22
MSS116YDR194C PSY2P40164 858 aa7.44□□□□□ -1.22
MSS116YDR194C FOL1P53848 824 aa7.44□□□□□ -1.22
MSS116YDR194C ULP1Q02724 621 aa7.44□□□□□ -1.22
MSS116YDR194C EEB1Q02891 456 aa7.44□□□□□ -1.22
MSS116YDR194C SPP1Q03012 353 aa7.44□□□□□ -1.22
MSS116YDR194C ADI1Q03677 179 aa7.44□□□□□ -1.22
MSS116YDR194C YBR184WP38299 523 aa7.43□□□□□ -1.22
MSS116YDR194C KAR2P16474 682 aaKnown RBP7.42□□□□□ -1.22
MSS116YDR194C MRC1P25588 1096 aa7.42□□□□□ -1.22
MSS116YDR194C ADR1P07248 1323 aa7.42□□□□□ -1.22
MSS116YDR194C CAN1P04817 590 aa7.42□□□□□ -1.22
MSS116YDR194C GAL11P19659 1081 aa7.42□□□□□ -1.22
MSS116YDR194C UTP7P40055 554 aaKnown RBP7.42□□□□□ -1.22
MSS116YDR194C ITC1P53125 1264 aa7.42□□□□□ -1.22
MSS116YDR194C NAB6Q03735 1134 aaKnown RBP RIP-Chip data7.42□□□□□ -1.22not detected
MSS116YDR194C UTP4Q06679 776 aaKnown RBP7.42□□□□□ -1.22
MSS116YDR194C LDB19Q12502 818 aa7.42□□□□□ -1.22
MSS116YDR194C DYS1P38791 387 aa7.41□□□□□ -1.22
MSS116YDR194C FIR1P40020 876 aa7.41□□□□□ -1.22
MSS116YDR194C SUM1P46676 1062 aa7.41□□□□□ -1.22
MSS116YDR194C SPO75Q07798 868 aa7.41□□□□□ -1.22
MSS116YDR194C RPL8AP17076 256 aaKnown RBP7.4□□□□□ -1.22
MSS116YDR194C RAD27P26793 382 aa7.4□□□□□ -1.22
MSS116YDR194C RPL8BP29453 256 aaKnown RBP7.4□□□□□ -1.22
MSS116YDR194C YNL165WP53891 406 aa7.4□□□□□ -1.22
MSS116YDR194C NTG2Q08214 380 aa7.4□□□□□ -1.22
MSS116YDR194C OSH2Q12451 1283 aa7.4□□□□□ -1.22
MSS116YDR194C GGA2P38817 585 aaKnown RBP7.4□□□□□ -1.23
MSS116YDR194C QDR2P40474 542 aa7.4□□□□□ -1.23
MSS116YDR194C CTR9P89105 1077 aa7.4□□□□□ -1.23
MSS116YDR194C Q0182Q9ZZW1 134 aa7.4□□□□□ -1.23
MSS116YDR194C CIT1P00890 479 aa7.39□□□□□ -1.23
MSS116YDR194C MSH2P25847 964 aa7.39□□□□□ -1.23
MSS116YDR194C PEX8P53248 589 aa7.39□□□□□ -1.23
MSS116YDR194C PTC2P39966 464 aaKnown RBP7.39□□□□□ -1.23
MSS116YDR194C GNP1P48813 663 aa7.39□□□□□ -1.23
MSS116YDR194C YDL121CQ07541 149 aa7.39□□□□□ -1.23
MSS116YDR194C FMP25Q08023 583 aa7.39□□□□□ -1.23
MSS116YDR194C TMA46Q12000 345 aaKnown RBP7.39□□□□□ -1.23
MSS116YDR194C NCR1Q12200 1170 aa7.39□□□□□ -1.23
MSS116YDR194C COBP00163 385 aa7.38□□□□□ -1.23
MSS116YDR194C HSP60P19882 572 aaKnown RBP7.38□□□□□ -1.23
MSS116YDR194C MON1P53129 644 aa7.38□□□□□ -1.23
MSS116YDR194C ECM16Q04217 1267 aaKnown RBP7.38□□□□□ -1.23
MSS116YDR194C DFG5Q05031 458 aa7.38□□□□□ -1.23
MSS116YDR194C RPP2BP02400 110 aaKnown RBP7.37□□□□□ -1.23
MSS116YDR194C KAR1P11927 433 aa7.37□□□□□ -1.23
MSS116YDR194C SPT23P35210 1082 aa7.37□□□□□ -1.23
MSS116YDR194C SYH1Q02875 849 aaKnown RBP7.37□□□□□ -1.23
MSS116YDR194C PUS5Q06244 254 aa7.37□□□□□ -1.23
MSS116YDR194C MRL1Q06815 381 aa7.37□□□□□ -1.23
MSS116YDR194C AGP1P25376 633 aa7.37□□□□□ -1.23
MSS116YDR194C PFD1P46988 109 aa7.37□□□□□ -1.23
MSS116YDR194C KRE33P53914 1056 aaKnown RBP7.37□□□□□ -1.23
MSS116YDR194C DUR3P33413 735 aa7.36□□□□□ -1.23
MSS116YDR194C VPS24P36095 224 aaKnown RBP7.36□□□□□ -1.23
MSS116YDR194C NUT1P53114 1132 aa7.36□□□□□ -1.23
MSS116YDR194C ESC2Q06340 456 aa7.36□□□□□ -1.23
MSS116YDR194C PWP2P25635 923 aaKnown RBP7.35□□□□□ -1.23
MSS116YDR194C MLF3P32047 452 aa7.35□□□□□ -1.23
MSS116YDR194C FUI1P38196 639 aa7.35□□□□□ -1.23
MSS116YDR194C XKS1P42826 600 aa7.35□□□□□ -1.23
MSS116YDR194C RTA1P53047 317 aa7.35□□□□□ -1.23
MSS116YDR194C SHE9Q04172 456 aa7.35□□□□□ -1.23
MSS116YDR194C SEA4P38164 1038 aa7.35□□□□□ -1.23
MSS116YDR194C YBL086CP38177 466 aa7.35□□□□□ -1.23
MSS116YDR194C IRR1P40541 1150 aa7.35□□□□□ -1.23
MSS116YDR194C YML082WQ04533 649 aaKnown RBP7.35□□□□□ -1.23
MSS116YDR194C MRP8P35719 219 aa7.34□□□□□ -1.23
MSS116YDR194C VBA5P36172 582 aa7.34□□□□□ -1.23
MSS116YDR194C BSD2P38356 321 aa7.34□□□□□ -1.23
MSS116YDR194C TAF8Q03750 510 aa7.34□□□□□ -1.23
MSS116YDR194C MSH6Q03834 1242 aa7.34□□□□□ -1.23
MSS116YDR194C ATG13Q06628 738 aa7.34□□□□□ -1.23
MSS116YDR194C SFP1P32432 683 aa7.33□□□□□ -1.24
MSS116YDR194C MRT4P33201 236 aaKnown RBP7.33□□□□□ -1.24
MSS116YDR194C ISW1P38144 1129 aa7.33□□□□□ -1.24
MSS116YDR194C SAP30P38429 201 aa7.33□□□□□ -1.24
MSS116YDR194C ERP6P53198 216 aa7.33□□□□□ -1.24
MSS116YDR194C EAF1Q06337 982 aa7.33□□□□□ -1.24
MSS116YDR194C YOR378WQ08902 515 aa7.33□□□□□ -1.24
MSS116YDR194C SBP1P10080 294 aaKnown RBP7.33□□□□□ -1.24
MSS116YDR194C VMA4P22203 233 aaKnown RBP7.33□□□□□ -1.24
MSS116YDR194C NAB2P32505 525 aaKnown RBP RIP-Chip data7.33□□□□□ -1.24 RIP-Chip
MSS116YDR194C ABD1P32783 436 aaPredicted RBP7.33□□□□□ -1.24
MSS116YDR194C CEF1Q03654 590 aaPredicted RBP7.33□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 48.6 ms