RNA–Protein interactions for RNA: YDL116W

NUP84, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP84, Length 2,181 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP84YDL116W PDC1P06169 563 aaKnown RBP7.93□□□□□ -1.14
NUP84YDL116W FBP26P32604 452 aa7.93□□□□□ -1.14
NUP84YDL116W YKE2P52553 114 aa7.93□□□□□ -1.14
NUP84YDL116W CTF4Q01454 927 aa7.93□□□□□ -1.14
NUP84YDL116W AFT2Q08957 416 aa7.93□□□□□ -1.14
NUP84YDL116W YOL098CQ12496 1037 aa7.93□□□□□ -1.14
NUP84YDL116W ECM1P39715 212 aa7.93□□□□□ -1.14
NUP84YDL116W COG4Q06096 861 aa7.93□□□□□ -1.14
NUP84YDL116W SEC18P18759 758 aaKnown RBP7.92□□□□□ -1.14
NUP84YDL116W RPT3P33298 428 aaKnown RBP7.92□□□□□ -1.14
NUP84YDL116W BCH2P36122 765 aa7.92□□□□□ -1.14
NUP84YDL116W YPT11P48559 417 aa7.92□□□□□ -1.14
NUP84YDL116W VPS1P21576 704 aaKnown RBP7.91□□□□□ -1.14
NUP84YDL116W YMR102CQ03177 834 aa7.91□□□□□ -1.14
NUP84YDL116W YPR204WQ08995 1032 aa7.91□□□□□ -1.14
NUP84YDL116W MCM16Q12262 181 aa7.91□□□□□ -1.14
NUP84YDL116W TAF13P11747 167 aa7.91□□□□□ -1.14
NUP84YDL116W PKC1P24583 1151 aa7.91□□□□□ -1.14
NUP84YDL116W COQ8P27697 501 aa7.91□□□□□ -1.14
NUP84YDL116W SEC65P29478 273 aa7.91□□□□□ -1.14
NUP84YDL116W SAC6P32599 642 aaKnown RBP7.91□□□□□ -1.14
NUP84YDL116W MSH3P25336 1018 aa7.9□□□□□ -1.14
NUP84YDL116W MED8P38304 223 aa7.9□□□□□ -1.14
NUP84YDL116W SSF1P38789 453 aaPredicted RBP7.9□□□□□ -1.14
NUP84YDL116W YBP2P53169 641 aa7.9□□□□□ -1.14
NUP84YDL116W HDA1P53973 706 aa7.9□□□□□ -1.14
NUP84YDL116W PEP3P27801 918 aa7.9□□□□□ -1.15
NUP84YDL116W REI1P38344 393 aaPredicted RBP7.9□□□□□ -1.15
NUP84YDL116W VPS41P38959 992 aa7.9□□□□□ -1.15
NUP84YDL116W SPO22P40511 975 aa7.9□□□□□ -1.15
NUP84YDL116W APT1P49435 187 aaKnown RBP7.9□□□□□ -1.15
NUP84YDL116W LAM4P38800 1345 aa7.89□□□□□ -1.15
NUP84YDL116W HXK1P04806 485 aaKnown RBP7.89□□□□□ -1.15
NUP84YDL116W MATALPHA2P0CY08 210 aa7.89□□□□□ -1.15
NUP84YDL116W HMLALPHA2P0CY09 210 aa7.89□□□□□ -1.15
NUP84YDL116W BRL1P38770 471 aa7.89□□□□□ -1.15
NUP84YDL116W ETT1Q08421 412 aaKnown RBP7.89□□□□□ -1.15
NUP84YDL116W GYP5Q12344 894 aa7.89□□□□□ -1.15
NUP84YDL116W TPM1P17536 199 aaKnown RBP7.88□□□□□ -1.15
NUP84YDL116W ARG8P18544 423 aa7.88□□□□□ -1.15
NUP84YDL116W RMT2Q03305 412 aa7.88□□□□□ -1.15
NUP84YDL116W RBA50Q04418 439 aa7.88□□□□□ -1.15
NUP84YDL116W SML1Q04964 104 aa7.88□□□□□ -1.15
NUP84YDL116W UBC1P21734 215 aaKnown RBP7.88□□□□□ -1.15
NUP84YDL116W YHL017WP38745 532 aa7.88□□□□□ -1.15
NUP84YDL116W SPT8P38915 602 aa7.88□□□□□ -1.15
NUP84YDL116W LSC2P53312 427 aa7.88□□□□□ -1.15
NUP84YDL116W CWC22P53333 577 aaKnown RBP7.88□□□□□ -1.15
NUP84YDL116W STO1P34160 861 aaKnown RBP7.87□□□□□ -1.15
NUP84YDL116W AKR1P39010 764 aa7.87□□□□□ -1.15
NUP84YDL116W YLR407WQ06070 228 aa7.87□□□□□ -1.15
NUP84YDL116W ATG13Q06628 738 aa7.87□□□□□ -1.15
NUP84YDL116W NOP53Q12080 455 aaKnown RBP7.87□□□□□ -1.15
NUP84YDL116W RRI2Q12348 645 aa7.87□□□□□ -1.15
NUP84YDL116W CHO2P05374 869 aaKnown RBP7.87□□□□□ -1.15
NUP84YDL116W RGD1P38339 666 aa7.87□□□□□ -1.15
NUP84YDL116W DSN1P40568 576 aa7.87□□□□□ -1.15
NUP84YDL116W PTK2P47116 818 aaKnown RBP7.87□□□□□ -1.15
NUP84YDL116W CAF130P53280 1122 aaPredicted RBP7.87□□□□□ -1.15
NUP84YDL116W YLR001CQ07895 862 aa7.87□□□□□ -1.15
NUP84YDL116W PSR2Q07949 397 aa7.87□□□□□ -1.15
NUP84YDL116W PSK2Q08217 1101 aa7.87□□□□□ -1.15
NUP84YDL116W UTP10P42945 1769 aaKnown RBP7.87□□□□□ -1.15
NUP84YDL116W CDC6P09119 513 aa7.86□□□□□ -1.15
NUP84YDL116W SHM1P37292 490 aaPredicted RBP7.86□□□□□ -1.15
NUP84YDL116W RPN10P38886 268 aaKnown RBP7.86□□□□□ -1.15
NUP84YDL116W BIM1P40013 344 aa7.86□□□□□ -1.15
NUP84YDL116W SNU66Q12420 587 aaPredicted RBP7.86□□□□□ -1.15
NUP84YDL116W RPS6AP0CX37 236 aaKnown RBP7.86□□□□□ -1.15
NUP84YDL116W RPS6BP0CX38 236 aaPredicted RBP7.86□□□□□ -1.15
NUP84YDL116W GLN1P32288 370 aaKnown RBP7.86□□□□□ -1.15
NUP84YDL116W SLD2P34252 453 aa7.86□□□□□ -1.15
NUP84YDL116W VPS75P53853 264 aa7.86□□□□□ -1.15
NUP84YDL116W SFH1Q06168 426 aa7.86□□□□□ -1.15
NUP84YDL116W MRC1P25588 1096 aa7.85□□□□□ -1.15
NUP84YDL116W ECM32P32644 1121 aaKnown RBP7.85□□□□□ -1.15
NUP84YDL116W ALD3P54114 506 aa7.85□□□□□ -1.15
NUP84YDL116W MRS2Q01926 470 aa7.85□□□□□ -1.15
NUP84YDL116W ECM23Q02710 187 aa7.85□□□□□ -1.15
NUP84YDL116W DCS2Q12123 353 aa7.85□□□□□ -1.15
NUP84YDL116W RNA1P11745 407 aaKnown RBP7.84□□□□□ -1.15
NUP84YDL116W PFK2P16862 959 aaKnown RBP RIP-Chip data7.84□□□□□ -1.15not detected
NUP84YDL116W URA1P28272 314 aaPredicted RBP7.84□□□□□ -1.15
NUP84YDL116W YJR008WP47085 338 aa7.84□□□□□ -1.15
NUP84YDL116W YPL216WQ08964 1102 aa7.84□□□□□ -1.15
NUP84YDL116W GIN4Q12263 1142 aa7.84□□□□□ -1.15
NUP84YDL116W COX6P00427 148 aa7.84□□□□□ -1.15
NUP84YDL116W SSA4P22202 642 aaKnown RBP7.84□□□□□ -1.15
NUP84YDL116W SER1P33330 395 aaKnown RBP7.84□□□□□ -1.15
NUP84YDL116W YET1P35723 206 aa7.84□□□□□ -1.15
NUP84YDL116W YKT6P36015 200 aaKnown RBP7.84□□□□□ -1.15
NUP84YDL116W CDC27P38042 758 aa7.84□□□□□ -1.15
NUP84YDL116W YJL007CP47080 104 aa7.84□□□□□ -1.15
NUP84YDL116W CSC1Q06538 782 aa7.84□□□□□ -1.15
NUP84YDL116W SDH5Q08230 162 aa7.84□□□□□ -1.15
NUP84YDL116W ATG9Q12142 997 aa7.84□□□□□ -1.15
NUP84YDL116W PSE1P32337 1089 aaKnown RBP7.83□□□□□ -1.16
NUP84YDL116W RPC25P35718 212 aa7.83□□□□□ -1.16
NUP84YDL116W ATG32P40458 529 aa7.83□□□□□ -1.16
NUP84YDL116W YIR042CP40586 236 aa7.83□□□□□ -1.16
Retrieved 100 of 5,963 RNA–protein pairs in 51.5 ms