RNA–Protein interactions for RNA: YCR088W

ABP1, Transcript of Actin-binding protein of the cortical actin cytoskeleton, yeastyeast

Gene ABP1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABP1YCR088W STR2P47164 639 aa9.02□□□□□ -0.97
ABP1YCR088W PPM2Q08282 695 aa9.02□□□□□ -0.97
ABP1YCR088W APL4Q12028 832 aa9.02□□□□□ -0.97
ABP1YCR088W TAH18Q12181 623 aa9.02□□□□□ -0.97
ABP1YCR088W DIT2P21595 489 aa9.01□□□□□ -0.97
ABP1YCR088W YKT6P36015 200 aaKnown RBP9.01□□□□□ -0.97
ABP1YCR088W PCH2P38126 564 aa9.01□□□□□ -0.97
ABP1YCR088W TMA16Q08687 178 aa9.01□□□□□ -0.97
ABP1YCR088W GLO3P38682 493 aaKnown RBP9.01□□□□□ -0.97
ABP1YCR088W UBP10P53874 792 aaPredicted RBP9.01□□□□□ -0.97
ABP1YCR088W HDA1P53973 706 aa9.01□□□□□ -0.97
ABP1YCR088W DCS2Q12123 353 aa9.01□□□□□ -0.97
ABP1YCR088W POM152P39685 1337 aa9.01□□□□□ -0.97
ABP1YCR088W HXK1P04806 485 aaKnown RBP9□□□□□ -0.97
ABP1YCR088W CHO2P05374 869 aaKnown RBP9□□□□□ -0.97
ABP1YCR088W PFK2P16862 959 aaKnown RBP RIP-Chip data9□□□□□ -0.97not detected
ABP1YCR088W CDC15P27636 974 aa9□□□□□ -0.97
ABP1YCR088W RER2P35196 286 aa9□□□□□ -0.97
ABP1YCR088W RPN10P38886 268 aaKnown RBP9□□□□□ -0.97
ABP1YCR088W AKR1P39010 764 aa9□□□□□ -0.97
ABP1YCR088W RAD26P40352 1085 aa9□□□□□ -0.97
ABP1YCR088W SSF2Q12153 453 aaPredicted RBP9□□□□□ -0.97
ABP1YCR088W CDC6P09119 513 aa8.99□□□□□ -0.97
ABP1YCR088W COQ1P18900 473 aa8.99□□□□□ -0.97
ABP1YCR088W VPS1P21576 704 aaKnown RBP8.99□□□□□ -0.97
ABP1YCR088W CRG1P38892 291 aaRIP-Chip data8.99□□□□□ -0.97not detected
ABP1YCR088W CIN4P39110 191 aa8.99□□□□□ -0.97
ABP1YCR088W COG4Q06096 861 aa8.99□□□□□ -0.97
ABP1YCR088W EST2Q06163 884 aa8.99□□□□□ -0.97
ABP1YCR088W SPN1Q06505 410 aaPredicted RBP8.99□□□□□ -0.97
ABP1YCR088W IMH1Q06704 911 aaKnown RBP8.99□□□□□ -0.97
ABP1YCR088W NYV1Q12255 253 aa8.99□□□□□ -0.97
ABP1YCR088W NGR1P32831 672 aaKnown RBP8.99□□□□□ -0.97
ABP1YCR088W PTK2P47116 818 aaKnown RBP8.99□□□□□ -0.97
ABP1YCR088W PRP31P49704 494 aaPredicted RBP8.99□□□□□ -0.97
ABP1YCR088W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.99□□□□□ -0.97not detected
ABP1YCR088W QCR6P00127 147 aa8.98□□□□□ -0.97
ABP1YCR088W URA1P28272 314 aaPredicted RBP8.98□□□□□ -0.97
ABP1YCR088W GRX7P38068 203 aa8.98□□□□□ -0.97
ABP1YCR088W MSH4P40965 878 aaPredicted RBP8.98□□□□□ -0.97
ABP1YCR088W TFG2P41896 400 aaPredicted RBP8.98□□□□□ -0.97
ABP1YCR088W CBP3P21560 335 aa8.97□□□□□ -0.97
ABP1YCR088W YIR042CP40586 236 aa8.97□□□□□ -0.97
ABP1YCR088W PDC1P06169 563 aaKnown RBP8.96□□□□□ -0.97
ABP1YCR088W MPH3P0CE00 602 aa8.96□□□□□ -0.97
ABP1YCR088W SWI4P25302 1093 aaKnown RBP8.96□□□□□ -0.97
ABP1YCR088W SIS2P36024 562 aa8.96□□□□□ -0.97
ABP1YCR088W RTT107P38850 1070 aa8.96□□□□□ -0.97
ABP1YCR088W IRC8P47046 822 aa8.96□□□□□ -0.97
ABP1YCR088W VPS75P53853 264 aa8.96□□□□□ -0.97
ABP1YCR088W UTP13Q05946 817 aaKnown RBP8.96□□□□□ -0.97
ABP1YCR088W HAT1Q12341 374 aa8.96□□□□□ -0.97
ABP1YCR088W PIF1P07271 859 aa8.96□□□□□ -0.98
ABP1YCR088W PET123P17558 318 aa8.96□□□□□ -0.98
ABP1YCR088W RRP43P25359 394 aaPredicted RBP8.96□□□□□ -0.98
ABP1YCR088W VPS60Q03390 229 aa8.96□□□□□ -0.98
ABP1YCR088W THI3Q07471 609 aa8.96□□□□□ -0.98
ABP1YCR088W AFT2Q08957 416 aa8.96□□□□□ -0.98
ABP1YCR088W INM2Q05533 292 aa8.95□□□□□ -0.98
ABP1YCR088W GRE2Q12068 342 aaKnown RBP8.95□□□□□ -0.98
ABP1YCR088W SPB4P25808 606 aaPredicted RBP8.94□□□□□ -0.98
ABP1YCR088W RPT3P33298 428 aaKnown RBP8.94□□□□□ -0.98
ABP1YCR088W TFC6Q06339 672 aa8.94□□□□□ -0.98
ABP1YCR088W PET111P08468 800 aa8.94□□□□□ -0.98
ABP1YCR088W PHO13P19881 312 aa8.94□□□□□ -0.98
ABP1YCR088W OXP1P28273 1286 aa8.94□□□□□ -0.98
ABP1YCR088W SAC6P32599 642 aaKnown RBP8.94□□□□□ -0.98
ABP1YCR088W PXL1P36166 706 aa8.94□□□□□ -0.98
ABP1YCR088W ENP2P48234 707 aaKnown RBP8.94□□□□□ -0.98
ABP1YCR088W CUE3P53137 624 aaKnown RBP8.94□□□□□ -0.98
ABP1YCR088W GET3Q12154 354 aaKnown RBP8.94□□□□□ -0.98
ABP1YCR088W MCM16Q12262 181 aa8.94□□□□□ -0.98
ABP1YCR088W MRC1P25588 1096 aa8.93□□□□□ -0.98
ABP1YCR088W MGM1P32266 881 aa8.93□□□□□ -0.98
ABP1YCR088W UFD2P54860 961 aa8.93□□□□□ -0.98
ABP1YCR088W YCG1Q06680 1035 aa8.93□□□□□ -0.98
ABP1YCR088W PTC5Q12511 572 aa8.93□□□□□ -0.98
ABP1YCR088W BMH2P34730 273 aaKnown RBP8.92□□□□□ -0.98
ABP1YCR088W SHM1P37292 490 aaPredicted RBP8.92□□□□□ -0.98
ABP1YCR088W YGR130CP53278 816 aa8.92□□□□□ -0.98
ABP1YCR088W YAH1Q12184 172 aaKnown RBP8.92□□□□□ -0.98
ABP1YCR088W YKL068W-AQ3E826 78 aa8.92□□□□□ -0.98
ABP1YCR088W NOP14Q99207 810 aaKnown RBP8.92□□□□□ -0.98
ABP1YCR088W UBC1P21734 215 aaKnown RBP8.91□□□□□ -0.98
ABP1YCR088W ADE17P38009 592 aaKnown RBP8.91□□□□□ -0.98
ABP1YCR088W RRP8P38961 392 aaKnown RBP8.91□□□□□ -0.98
ABP1YCR088W SEC9P40357 651 aa8.91□□□□□ -0.98
ABP1YCR088W MGA2P40578 1113 aa8.91□□□□□ -0.98
ABP1YCR088W ALD2P47771 506 aa8.91□□□□□ -0.98
ABP1YCR088W RPS15Q01855 142 aaKnown RBP8.91□□□□□ -0.98
ABP1YCR088W RRB1Q04225 511 aaKnown RBP8.91□□□□□ -0.98
ABP1YCR088W CSC1Q06538 782 aa8.91□□□□□ -0.98
ABP1YCR088W MSH3P25336 1018 aa8.91□□□□□ -0.98
ABP1YCR088W SEC65P29478 273 aa8.91□□□□□ -0.98
ABP1YCR088W SPC110P32380 944 aa8.91□□□□□ -0.98
ABP1YCR088W APT1P49435 187 aaKnown RBP8.91□□□□□ -0.98
ABP1YCR088W CAF130P53280 1122 aaPredicted RBP8.91□□□□□ -0.98
ABP1YCR088W CSM2P40465 213 aa8.9□□□□□ -0.98
ABP1YCR088W PCI8P40512 444 aa8.9□□□□□ -0.98
ABP1YCR088W IOC3P43596 787 aa8.9□□□□□ -0.98
Retrieved 100 of 5,963 RNA–protein pairs in 36.2 ms