RNA–Protein interactions for RNA: YBR263W

SHM1, Transcript of Mitochondrial serine hydroxymethyltransferase, yeastyeast

Gene SHM1, Length 1,473 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM1YBR263W OSH7P38755 437 aa7.18□□□□□ -1.26
SHM1YBR263W YBP2P53169 641 aa7.18□□□□□ -1.26
SHM1YBR263W YNL050CP53952 270 aa7.18□□□□□ -1.26
SHM1YBR263W KIN1P13185 1064 aa7.17□□□□□ -1.26
SHM1YBR263W SSA2P10592 639 aaKnown RBP7.17□□□□□ -1.26
SHM1YBR263W MAK16P10962 306 aaPredicted RBP7.17□□□□□ -1.26
SHM1YBR263W GRX1P25373 110 aaKnown RBP7.17□□□□□ -1.26
SHM1YBR263W KCC4P25389 1037 aa7.17□□□□□ -1.26
SHM1YBR263W ROG3P43602 733 aa7.17□□□□□ -1.26
SHM1YBR263W FBP26P32604 452 aa7.16□□□□□ -1.26
SHM1YBR263W ALD2P47771 506 aa7.16□□□□□ -1.26
SHM1YBR263W TY1A-MR1Q04215 440 aa7.16□□□□□ -1.26
SHM1YBR263W RTT109Q07794 436 aa7.16□□□□□ -1.26
SHM1YBR263W BDS1Q08347 646 aa7.16□□□□□ -1.26
SHM1YBR263W STE6P12866 1290 aa7.14□□□□□ -1.27
SHM1YBR263W RAD4P14736 754 aa7.14□□□□□ -1.27
SHM1YBR263W UGA2P38067 497 aa7.14□□□□□ -1.27
SHM1YBR263W SAP155P43612 1002 aa7.14□□□□□ -1.27
SHM1YBR263W HEF3P53978 1044 aaKnown RBP7.14□□□□□ -1.27
SHM1YBR263W ALE1Q08548 619 aa7.14□□□□□ -1.27
SHM1YBR263W CCP1P00431 361 aa7.13□□□□□ -1.27
SHM1YBR263W RPP0P05317 312 aaKnown RBP7.13□□□□□ -1.27
SHM1YBR263W GUT2P32191 649 aa7.13□□□□□ -1.27
SHM1YBR263W ZDS1P50111 915 aaKnown RBP7.13□□□□□ -1.27
SHM1YBR263W RMT2Q03305 412 aa7.13□□□□□ -1.27
SHM1YBR263W MAM1P40065 302 aa7.12□□□□□ -1.27
SHM1YBR263W MTC5Q03897 1148 aa7.12□□□□□ -1.27
SHM1YBR263W NSE3Q05541 303 aa7.12□□□□□ -1.27
SHM1YBR263W RIM15P43565 1770 aa7.12□□□□□ -1.27
SHM1YBR263W SUI2P20459 304 aaKnown RBP7.11□□□□□ -1.27
SHM1YBR263W VPS27P40343 622 aaKnown RBP7.11□□□□□ -1.27
SHM1YBR263W RRT14P40470 206 aa7.11□□□□□ -1.27
SHM1YBR263W BMS1Q08965 1183 aaKnown RBP7.11□□□□□ -1.27
SHM1YBR263W GYP7P48365 746 aa7.11□□□□□ -1.27
SHM1YBR263W NAF1P53919 492 aaKnown RBP7.11□□□□□ -1.27
SHM1YBR263W BUG1Q12191 341 aa7.11□□□□□ -1.27
SHM1YBR263W COQ4O13525 335 aa7.1□□□□□ -1.27
SHM1YBR263W LYS2P07702 1392 aa7.09□□□□□ -1.27
SHM1YBR263W PRS1P32895 427 aaKnown RBP7.09□□□□□ -1.27
SHM1YBR263W YBR287WP38355 427 aa7.09□□□□□ -1.27
SHM1YBR263W BUD27P43573 796 aaKnown RBP RIP-Chip data7.09□□□□□ -1.27not detected
SHM1YBR263W NAM8Q00539 523 aaKnown RBP7.09□□□□□ -1.27
SHM1YBR263W ISU1Q03020 165 aa7.09□□□□□ -1.27
SHM1YBR263W ATG20Q07528 640 aa7.09□□□□□ -1.27
SHM1YBR263W FRA1Q07825 749 aa7.09□□□□□ -1.27
SHM1YBR263W PHM7Q12252 991 aa7.09□□□□□ -1.27
SHM1YBR263W NYV1Q12255 253 aa7.09□□□□□ -1.27
SHM1YBR263W CDC19P00549 500 aaKnown RBP7.08□□□□□ -1.28
SHM1YBR263W TOS1P38288 455 aa7.08□□□□□ -1.28
SHM1YBR263W UTP22P53254 1237 aaPredicted RBP7.08□□□□□ -1.28
SHM1YBR263W ALD3P54114 506 aa7.08□□□□□ -1.28
SHM1YBR263W STE20Q03497 939 aaKnown RBP7.08□□□□□ -1.28
SHM1YBR263W CDC45Q08032 650 aa7.08□□□□□ -1.28
SHM1YBR263W DPH6Q12429 685 aa7.08□□□□□ -1.28
SHM1YBR263W GUA1P38625 525 aaKnown RBP7.07□□□□□ -1.28
SHM1YBR263W MDG1P53885 366 aa7.07□□□□□ -1.28
SHM1YBR263W ZDS2P54786 942 aa7.07□□□□□ -1.28
SHM1YBR263W SSP2Q08646 371 aa7.07□□□□□ -1.28
SHM1YBR263W VTC4P47075 721 aa7.06□□□□□ -1.28
SHM1YBR263W SRT1Q03175 343 aa7.06□□□□□ -1.28
SHM1YBR263W YOL057WQ08225 711 aa7.06□□□□□ -1.28
SHM1YBR263W YPR204WQ08995 1032 aa7.06□□□□□ -1.28
SHM1YBR263W RVB2Q12464 471 aaKnown RBP7.06□□□□□ -1.28
SHM1YBR263W SER1P33330 395 aaKnown RBP7.05□□□□□ -1.28
SHM1YBR263W APL2P36000 726 aaPredicted RBP7.04□□□□□ -1.28
SHM1YBR263W YFR016CP43597 1233 aaKnown RBP7.04□□□□□ -1.28
SHM1YBR263W LYS5P50113 272 aa7.04□□□□□ -1.28
SHM1YBR263W YGL082WP53155 381 aa7.04□□□□□ -1.28
SHM1YBR263W RIX7Q07844 837 aaKnown RBP7.04□□□□□ -1.28
SHM1YBR263W HPC2Q01448 625 aa7.03□□□□□ -1.28
SHM1YBR263W YDR306CQ06640 478 aa7.03□□□□□ -1.28
SHM1YBR263W CTI6Q08923 506 aa7.03□□□□□ -1.28
SHM1YBR263W DAL1P32375 460 aa7.02□□□□□ -1.29
SHM1YBR263W RPN1P38764 993 aaKnown RBP7.02□□□□□ -1.29
SHM1YBR263W YRB30P53107 440 aaPredicted RBP7.02□□□□□ -1.29
SHM1YBR263W NAB6Q03735 1134 aaKnown RBP RIP-Chip data7.02□□□□□ -1.29not detected
SHM1YBR263W VPS64Q03944 604 aa7.02□□□□□ -1.29
SHM1YBR263W ICP55P40051 511 aa7.01□□□□□ -1.29
SHM1YBR263W JJJ3P47138 172 aa7.01□□□□□ -1.29
SHM1YBR263W DNM1P54861 757 aa7.01□□□□□ -1.29
SHM1YBR263W SWI1P09547 1314 aa7□□□□□ -1.29
SHM1YBR263W LPD1P09624 499 aaKnown RBP7□□□□□ -1.29
SHM1YBR263W DLD3P39976 496 aaKnown RBP7□□□□□ -1.29
SHM1YBR263W YJR008WP47085 338 aa7□□□□□ -1.29
SHM1YBR263W EAF6P47128 113 aa7□□□□□ -1.29
SHM1YBR263W YGR122WP53272 402 aa7□□□□□ -1.29
SHM1YBR263W RPP2BP02400 110 aaKnown RBP6.99□□□□□ -1.29
SHM1YBR263W MRP7P12687 371 aa6.99□□□□□ -1.29
SHM1YBR263W EMP47P43555 445 aa6.99□□□□□ -1.29
SHM1YBR263W APL6P46682 809 aa6.99□□□□□ -1.29
SHM1YBR263W ISF1P32488 338 aa6.98□□□□□ -1.29
SHM1YBR263W YIL092WP40497 633 aa6.98□□□□□ -1.29
SHM1YBR263W CUZ1P53899 274 aa6.98□□□□□ -1.29
SHM1YBR263W RAT1Q02792 1006 aaKnown RBP6.98□□□□□ -1.29
SHM1YBR263W WTM2Q12206 467 aa6.98□□□□□ -1.29
SHM1YBR263W MCM16Q12262 181 aa6.98□□□□□ -1.29
SHM1YBR263W UTP10P42945 1769 aaKnown RBP6.98□□□□□ -1.29
SHM1YBR263W DAL5P15365 543 aa6.98□□□□□ -1.29
SHM1YBR263W NUP133P36161 1157 aa6.98□□□□□ -1.29
SHM1YBR263W MSN5P52918 1224 aa6.98□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms