RNA–Protein interactions for RNA: YBR229C

ROT2, Transcript of Glucosidase II catalytic subunit, yeastyeast

Gene ROT2, Length 2,865 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROT2YBR229C GEF1P37020 779 aa5.57□□□□□ -1.52
ROT2YBR229C JSN1P47135 1091 aaKnown RBP RIP-Chip data5.57□□□□□ -1.52not detected
ROT2YBR229C PPM2Q08282 695 aa5.57□□□□□ -1.52
ROT2YBR229C ISW2Q08773 1120 aa5.57□□□□□ -1.52
ROT2YBR229C MCM4P30665 933 aaKnown RBP5.57□□□□□ -1.52
ROT2YBR229C IOC3P43596 787 aa5.57□□□□□ -1.52
ROT2YBR229C HSP82P02829 709 aaKnown RBP5.56□□□□□ -1.52
ROT2YBR229C HXK1P04806 485 aaKnown RBP5.56□□□□□ -1.52
ROT2YBR229C PSY4P38193 441 aa5.56□□□□□ -1.52
ROT2YBR229C CIN4P39110 191 aa5.56□□□□□ -1.52
ROT2YBR229C IRC8P47046 822 aa5.56□□□□□ -1.52
ROT2YBR229C VMS1Q04311 632 aaKnown RBP5.56□□□□□ -1.52
ROT2YBR229C GRE2Q12068 342 aaKnown RBP5.56□□□□□ -1.52
ROT2YBR229C MSB4Q12317 492 aa5.56□□□□□ -1.52
ROT2YBR229C BMH2P34730 273 aaKnown RBP5.56□□□□□ -1.52
ROT2YBR229C RPN10P38886 268 aaKnown RBP5.56□□□□□ -1.52
ROT2YBR229C NOC2P39744 710 aaKnown RBP5.56□□□□□ -1.52
ROT2YBR229C COG4Q06096 861 aa5.56□□□□□ -1.52
ROT2YBR229C DCS2Q12123 353 aa5.56□□□□□ -1.52
ROT2YBR229C CYB2P00175 591 aa5.55□□□□□ -1.52
ROT2YBR229C RGP1P16664 663 aa5.55□□□□□ -1.52
ROT2YBR229C ASF1P32447 279 aa5.55□□□□□ -1.52
ROT2YBR229C NUG1P40010 520 aaKnown RBP5.55□□□□□ -1.52
ROT2YBR229C CUE3P53137 624 aaKnown RBP5.55□□□□□ -1.52
ROT2YBR229C VPS75P53853 264 aa5.55□□□□□ -1.52
ROT2YBR229C VPS60Q03390 229 aa5.55□□□□□ -1.52
ROT2YBR229C LAM6Q08001 693 aa5.55□□□□□ -1.52
ROT2YBR229C FIG2P25653 1609 aa5.55□□□□□ -1.52
ROT2YBR229C COQ1P18900 473 aa5.55□□□□□ -1.52
ROT2YBR229C AKR1P39010 764 aa5.55□□□□□ -1.52
ROT2YBR229C YCG1Q06680 1035 aa5.55□□□□□ -1.52
ROT2YBR229C MCM3P24279 971 aaKnown RBP5.54□□□□□ -1.52
ROT2YBR229C MRC1P25588 1096 aa5.54□□□□□ -1.52
ROT2YBR229C PXL1P36166 706 aa5.54□□□□□ -1.52
ROT2YBR229C TFC8Q12308 588 aa5.54□□□□□ -1.52
ROT2YBR229C PHO13P19881 312 aa5.54□□□□□ -1.52
ROT2YBR229C SWI4P25302 1093 aaKnown RBP5.54□□□□□ -1.52
ROT2YBR229C BMH1P29311 267 aaKnown RBP5.54□□□□□ -1.52
ROT2YBR229C NGR1P32831 672 aaKnown RBP5.54□□□□□ -1.52
ROT2YBR229C STR2P47164 639 aa5.54□□□□□ -1.52
ROT2YBR229C SRC1Q03707 834 aa5.54□□□□□ -1.52
ROT2YBR229C STE11P23561 717 aa5.53□□□□□ -1.52
ROT2YBR229C URA1P28272 314 aaPredicted RBP5.53□□□□□ -1.52
ROT2YBR229C GRX7P38068 203 aa5.53□□□□□ -1.52
ROT2YBR229C THI3Q07471 609 aa5.53□□□□□ -1.52
ROT2YBR229C GET3Q12154 354 aaKnown RBP5.53□□□□□ -1.52
ROT2YBR229C HCA4P20448 770 aaKnown RBP5.53□□□□□ -1.52
ROT2YBR229C RPS15Q01855 142 aaKnown RBP5.53□□□□□ -1.52
ROT2YBR229C RAT1Q02792 1006 aaKnown RBP5.53□□□□□ -1.52
ROT2YBR229C TMA16Q08687 178 aa5.53□□□□□ -1.52
ROT2YBR229C ARP8Q12386 881 aaKnown RBP RIP-Chip data5.53□□□□□ -1.52not detected
ROT2YBR229C CDC6P09119 513 aa5.53□□□□□ -1.52
ROT2YBR229C MGM1P32266 881 aa5.53□□□□□ -1.52
ROT2YBR229C PRP40P33203 583 aaKnown RBP5.53□□□□□ -1.52
ROT2YBR229C RRP8P38961 392 aaKnown RBP5.53□□□□□ -1.52
ROT2YBR229C DIB1Q06819 143 aaPredicted RBP5.53□□□□□ -1.52
ROT2YBR229C CTI6Q08923 506 aa5.53□□□□□ -1.52
ROT2YBR229C APL4Q12028 832 aa5.53□□□□□ -1.52
ROT2YBR229C SSA2P10592 639 aaKnown RBP5.52□□□□□ -1.53
ROT2YBR229C ADE17P38009 592 aaKnown RBP5.52□□□□□ -1.53
ROT2YBR229C ALF1P53904 254 aa5.52□□□□□ -1.53
ROT2YBR229C UFD2P54860 961 aa5.52□□□□□ -1.53
ROT2YBR229C INM2Q05533 292 aa5.52□□□□□ -1.53
ROT2YBR229C TFC6Q06339 672 aa5.52□□□□□ -1.53
ROT2YBR229C CHO2P05374 869 aaKnown RBP5.52□□□□□ -1.53
ROT2YBR229C CDC15P27636 974 aa5.52□□□□□ -1.53
ROT2YBR229C ALD2P47771 506 aa5.52□□□□□ -1.53
ROT2YBR229C GFD1Q04839 188 aaKnown RBP5.52□□□□□ -1.53
ROT2YBR229C DPH6Q12429 685 aa5.52□□□□□ -1.53
ROT2YBR229C VPS1P21576 704 aaKnown RBP5.51□□□□□ -1.53
ROT2YBR229C ICP55P40051 511 aa5.51□□□□□ -1.53
ROT2YBR229C GDE1Q02979 1223 aa5.51□□□□□ -1.53
ROT2YBR229C HCR1Q05775 265 aaKnown RBP5.51□□□□□ -1.53
ROT2YBR229C PDC1P06169 563 aaKnown RBP5.51□□□□□ -1.53
ROT2YBR229C MYO3P36006 1272 aa5.51□□□□□ -1.53
ROT2YBR229C PCH2P38126 564 aa5.51□□□□□ -1.53
ROT2YBR229C RXT2P38255 430 aa5.51□□□□□ -1.53
ROT2YBR229C PTC5Q12511 572 aa5.51□□□□□ -1.53
ROT2YBR229C ANP1P32629 500 aa5.5□□□□□ -1.53
ROT2YBR229C MAL31P38156 614 aa5.5□□□□□ -1.53
ROT2YBR229C YIR042CP40586 236 aa5.5□□□□□ -1.53
ROT2YBR229C OSW7P43611 510 aa5.5□□□□□ -1.53
ROT2YBR229C CEX1Q12453 761 aa5.5□□□□□ -1.53
ROT2YBR229C PET123P17558 318 aa5.5□□□□□ -1.53
ROT2YBR229C CCC2P38995 1004 aa5.5□□□□□ -1.53
ROT2YBR229C PRP31P49704 494 aaPredicted RBP5.5□□□□□ -1.53
ROT2YBR229C HDA1P53973 706 aa5.5□□□□□ -1.53
ROT2YBR229C SYF1Q04048 859 aaPredicted RBP5.5□□□□□ -1.53
ROT2YBR229C MMR1Q06324 491 aa5.5□□□□□ -1.53
ROT2YBR229C CSC1Q06538 782 aa5.5□□□□□ -1.53
ROT2YBR229C MCM16Q12262 181 aa5.5□□□□□ -1.53
ROT2YBR229C UBC1P21734 215 aaKnown RBP5.49□□□□□ -1.53
ROT2YBR229C SAC6P32599 642 aaKnown RBP5.49□□□□□ -1.53
ROT2YBR229C BOI1P38041 980 aaKnown RBP5.49□□□□□ -1.53
ROT2YBR229C BCD1P38772 366 aa5.49□□□□□ -1.53
ROT2YBR229C RTS1P38903 757 aa5.49□□□□□ -1.53
ROT2YBR229C PCI8P40512 444 aa5.49□□□□□ -1.53
ROT2YBR229C MSH4P40965 878 aaPredicted RBP5.49□□□□□ -1.53
ROT2YBR229C ALG2P43636 503 aa5.49□□□□□ -1.53
ROT2YBR229C APT1P49435 187 aaKnown RBP5.49□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 39 ms