RNA–Protein interactions for RNA: YBR109C

CMD1, Transcript of Calmodulin, yeast

Gene CMD1, Length 444 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMD1	YBR109C	YTA6	P40328	754 aa		5.03	□□□□□ -1.6
CMD1	YBR109C	RSC6	P25632	483 aa		5.02	□□□□□ -1.61
CMD1	YBR109C	YNL165W	P53891	406 aa		5.02	□□□□□ -1.61
CMD1	YBR109C	NUT2	Q06213	157 aa		5.02	□□□□□ -1.61
CMD1	YBR109C	SCD5	P34758	872 aa		5.01	□□□□□ -1.61
CMD1	YBR109C	PPX1	P38698	397 aa		5.01	□□□□□ -1.61
CMD1	YBR109C	APC11	Q12157	165 aa		5.01	□□□□□ -1.61
CMD1	YBR109C	FRT1	Q99332	602 aa		5.01	□□□□□ -1.61
CMD1	YBR109C	MRPL33	P20084	86 aa		5	□□□□□ -1.61
CMD1	YBR109C	WHI5	Q12416	295 aa		5	□□□□□ -1.61
CMD1	YBR109C	SSN2	P38931	1420 aa		4.99	□□□□□ -1.61
CMD1	YBR109C	RPB10	P22139	70 aa		4.99	□□□□□ -1.61
CMD1	YBR109C	KTR2	P33550	425 aa		4.99	□□□□□ -1.61
CMD1	YBR109C	Q0182	Q9ZZW1	134 aa		4.99	□□□□□ -1.61
CMD1	YBR109C	CYC7	P00045	113 aa		4.98	□□□□□ -1.61
CMD1	YBR109C	MLF3	P32047	452 aa		4.98	□□□□□ -1.61
CMD1	YBR109C	UTP4	Q06679	776 aa	Known RBP	4.98	□□□□□ -1.61
CMD1	YBR109C	VMA3	P25515	160 aa		4.97	□□□□□ -1.61
CMD1	YBR109C	NCL1	P38205	684 aa	Known RBP	4.97	□□□□□ -1.61
CMD1	YBR109C	SPO74	P45819	413 aa		4.97	□□□□□ -1.61
CMD1	YBR109C	TRS120	Q04183	1289 aa		4.97	□□□□□ -1.61
CMD1	YBR109C	SLP1	Q12232	587 aa		4.97	□□□□□ -1.61
CMD1	YBR109C	NIT1	P40447	199 aa		4.96	□□□□□ -1.62
CMD1	YBR109C	THI12	P42883	340 aa		4.96	□□□□□ -1.62
CMD1	YBR109C	THI5	P43534	340 aa		4.96	□□□□□ -1.62
CMD1	YBR109C	THI11	P47183	340 aa		4.96	□□□□□ -1.62
CMD1	YBR109C	SUT1	P53032	299 aa	Known RBP	4.96	□□□□□ -1.62
CMD1	YBR109C	RRP15	Q06511	250 aa	Predicted RBP	4.96	□□□□□ -1.62
CMD1	YBR109C	THI13	Q07748	340 aa		4.96	□□□□□ -1.62
CMD1	YBR109C	TCB3	Q03640	1545 aa	Known RBP	4.96	□□□□□ -1.62
CMD1	YBR109C	ASF1	P32447	279 aa		4.95	□□□□□ -1.62
CMD1	YBR109C	SKP1	P52286	194 aa		4.95	□□□□□ -1.62
CMD1	YBR109C	UFD2	P54860	961 aa		4.95	□□□□□ -1.62
CMD1	YBR109C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.95	□□□□□ -1.62	not detected
CMD1	YBR109C	GPI13	Q07830	1017 aa		4.95	□□□□□ -1.62
CMD1	YBR109C	ATE1	P16639	503 aa		4.94	□□□□□ -1.62
CMD1	YBR109C	MET4	P32389	672 aa		4.94	□□□□□ -1.62
CMD1	YBR109C	SEG2	P34250	1132 aa		4.94	□□□□□ -1.62
CMD1	YBR109C	LDH1	P38139	375 aa		4.94	□□□□□ -1.62
CMD1	YBR109C	QDR2	P40474	542 aa		4.94	□□□□□ -1.62
CMD1	YBR109C	POL32	P47110	350 aa		4.94	□□□□□ -1.62
CMD1	YBR109C	MNL2	Q12205	849 aa		4.94	□□□□□ -1.62
CMD1	YBR109C	DYS1	P38791	387 aa		4.93	□□□□□ -1.62
CMD1	YBR109C	HXT8	P40886	569 aa		4.93	□□□□□ -1.62
CMD1	YBR109C	SNU71	P53207	620 aa	Known RBP	4.93	□□□□□ -1.62
CMD1	YBR109C	ESC8	Q08119	714 aa		4.93	□□□□□ -1.62
CMD1	YBR109C	TY1A-NL1	Q12391	440 aa	Known RBP	4.93	□□□□□ -1.62
CMD1	YBR109C	SMC1	P32908	1225 aa		4.92	□□□□□ -1.62
CMD1	YBR109C	AKR1	P39010	764 aa		4.92	□□□□□ -1.62
CMD1	YBR109C	MSN1	P22148	382 aa		4.91	□□□□□ -1.62
CMD1	YBR109C	NAM7	P30771	971 aa	Known RBP	4.91	□□□□□ -1.62
CMD1	YBR109C	KAP122	P32767	1081 aa		4.91	□□□□□ -1.62
CMD1	YBR109C	MTO1	P53070	669 aa		4.91	□□□□□ -1.62
CMD1	YBR109C	RPC31	P17890	251 aa		4.9	□□□□□ -1.63
CMD1	YBR109C	LRG1	P35688	1017 aa		4.9	□□□□□ -1.63
CMD1	YBR109C	PAM1	P37304	830 aa	Known RBP	4.9	□□□□□ -1.63
CMD1	YBR109C	RGD2	P43556	714 aa		4.9	□□□□□ -1.63
CMD1	YBR109C	TY4B-P	A0A0B7P3V8	1104 aa		4.89	□□□□□ -1.63
CMD1	YBR109C	PHO4	P07270	312 aa	Known RBP	4.89	□□□□□ -1.63
CMD1	YBR109C	SEA4	P38164	1038 aa		4.89	□□□□□ -1.63
CMD1	YBR109C	BSD2	P38356	321 aa		4.89	□□□□□ -1.63
CMD1	YBR109C	RAD55	P38953	406 aa		4.89	□□□□□ -1.63
CMD1	YBR109C	NTA1	P40354	457 aa		4.89	□□□□□ -1.63
CMD1	YBR109C	YNL011C	P53980	444 aa		4.89	□□□□□ -1.63
CMD1	YBR109C	CDC55	Q00362	526 aa		4.89	□□□□□ -1.63
CMD1	YBR109C	RSC4	Q02206	625 aa		4.89	□□□□□ -1.63
CMD1	YBR109C	TY4A-H	Q6Q5P6	413 aa		4.89	□□□□□ -1.63
CMD1	YBR109C	MGE1	P38523	228 aa		4.88	□□□□□ -1.63
CMD1	YBR109C	FIR1	P40020	876 aa		4.88	□□□□□ -1.63
CMD1	YBR109C	YJR107W	P47145	328 aa		4.88	□□□□□ -1.63
CMD1	YBR109C	ECL1	P48235	211 aa		4.88	□□□□□ -1.63
CMD1	YBR109C	NOP7	P53261	605 aa	Known RBP	4.88	□□□□□ -1.63
CMD1	YBR109C	CUS1	Q02554	436 aa	Predicted RBP	4.88	□□□□□ -1.63
CMD1	YBR109C	YOR296W	Q08748	1289 aa		4.88	□□□□□ -1.63
CMD1	YBR109C	REC8	Q12188	680 aa		4.88	□□□□□ -1.63
CMD1	YBR109C	TIF6	Q12522	245 aa	Known RBP	4.88	□□□□□ -1.63
CMD1	YBR109C	MRP10	O75012	95 aa		4.87	□□□□□ -1.63
CMD1	YBR109C	SEC8	P32855	1065 aa		4.87	□□□□□ -1.63
CMD1	YBR109C	GIP1	P38229	639 aa		4.87	□□□□□ -1.63
CMD1	YBR109C	TAF1	P46677	1066 aa		4.87	□□□□□ -1.63
CMD1	YBR109C	IRS4	P36115	615 aa	Known RBP	4.86	□□□□□ -1.63
CMD1	YBR109C	ISW1	P38144	1129 aa		4.86	□□□□□ -1.63
CMD1	YBR109C	GIP4	P39732	760 aa		4.86	□□□□□ -1.63
CMD1	YBR109C	PSY2	P40164	858 aa		4.86	□□□□□ -1.63
CMD1	YBR109C	DAK2	P43550	591 aa		4.86	□□□□□ -1.63
CMD1	YBR109C	YNR040W	P53736	256 aa		4.86	□□□□□ -1.63
CMD1	YBR109C	OYE2	Q03558	400 aa	Known RBP	4.86	□□□□□ -1.63
CMD1	YBR109C	GCD6	P32501	712 aa	Known RBP	4.85	□□□□□ -1.63
CMD1	YBR109C	RPT1	P33299	467 aa	Known RBP	4.85	□□□□□ -1.63
CMD1	YBR109C	APM2	P38700	605 aa		4.85	□□□□□ -1.63
CMD1	YBR109C	SAM37	P50110	327 aa		4.85	□□□□□ -1.63
CMD1	YBR109C	PRP43	P53131	767 aa	Known RBP	4.85	□□□□□ -1.63
CMD1	YBR109C	BSC2	Q05611	235 aa		4.85	□□□□□ -1.63
CMD1	YBR109C	MSB1	P21339	1137 aa	Known RBP	4.84	□□□□□ -1.63
CMD1	YBR109C	VPS35	P34110	944 aa		4.84	□□□□□ -1.63
CMD1	YBR109C	YBR287W	P38355	427 aa		4.84	□□□□□ -1.63
CMD1	YBR109C	FYV10	P40492	516 aa		4.84	□□□□□ -1.63
CMD1	YBR109C	ITC1	P53125	1264 aa		4.84	□□□□□ -1.63
CMD1	YBR109C	DSE4	P53753	1117 aa		4.84	□□□□□ -1.63
CMD1	YBR109C	MCM2	P29469	868 aa		4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms