RNA–Protein interactions for RNA: YAL018C

LDS1, Transcript of Protein Involved in spore wall assembly, yeast

Gene LDS1, Length 978 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LDS1	YAL018C	ERT1	P38140	529 aa		7.32	□□□□□ -1.24
LDS1	YAL018C	NUG1	P40010	520 aa	Known RBP	7.31	□□□□□ -1.24
LDS1	YAL018C	ERO1	Q03103	563 aa		7.31	□□□□□ -1.24
LDS1	YAL018C	DPH6	Q12429	685 aa		7.31	□□□□□ -1.24
LDS1	YAL018C	RPS9B	P05755	195 aa	Known RBP	7.3	□□□□□ -1.24
LDS1	YAL018C	RFC1	P38630	861 aa	Known RBP	7.3	□□□□□ -1.24
LDS1	YAL018C	UBX2	Q04228	584 aa		7.3	□□□□□ -1.24
LDS1	YAL018C	CDC16	P09798	840 aa		7.29	□□□□□ -1.24
LDS1	YAL018C	RPN1	P38764	993 aa	Known RBP	7.29	□□□□□ -1.24
LDS1	YAL018C	UBP16	Q02863	499 aa		7.29	□□□□□ -1.24
LDS1	YAL018C	FRD1	P32614	470 aa	Known RBP	7.28	□□□□□ -1.24
LDS1	YAL018C	DSF2	P38213	736 aa		7.28	□□□□□ -1.24
LDS1	YAL018C	BDP1	P46678	594 aa		7.28	□□□□□ -1.24
LDS1	YAL018C	CWH41	P53008	833 aa		7.28	□□□□□ -1.24
LDS1	YAL018C	YGL242C	P53066	181 aa		7.28	□□□□□ -1.24
LDS1	YAL018C	MLC1	P53141	149 aa		7.28	□□□□□ -1.24
LDS1	YAL018C	GRX6	Q12438	231 aa		7.28	□□□□□ -1.24
LDS1	YAL018C	PIF1	P07271	859 aa		7.27	□□□□□ -1.25
LDS1	YAL018C	SMY1	P32364	656 aa	Known RBP	7.27	□□□□□ -1.25
LDS1	YAL018C	NPL4	P33755	580 aa		7.27	□□□□□ -1.25
LDS1	YAL018C	ICP55	P40051	511 aa		7.27	□□□□□ -1.25
LDS1	YAL018C	HXT10	P43581	546 aa		7.27	□□□□□ -1.25
LDS1	YAL018C	EAF6	P47128	113 aa		7.27	□□□□□ -1.25
LDS1	YAL018C	NKP2	Q06162	153 aa		7.27	□□□□□ -1.25
LDS1	YAL018C	YEL077C	Q3E7X8	1277 aa		7.27	□□□□□ -1.25
LDS1	YAL018C	ADR1	P07248	1323 aa		7.27	□□□□□ -1.25
LDS1	YAL018C	RAD50	P12753	1312 aa		7.27	□□□□□ -1.25
LDS1	YAL018C	SEC18	P18759	758 aa	Known RBP	7.26	□□□□□ -1.25
LDS1	YAL018C	PSE1	P32337	1089 aa	Known RBP	7.26	□□□□□ -1.25
LDS1	YAL018C	NGR1	P32831	672 aa	Known RBP	7.26	□□□□□ -1.25
LDS1	YAL018C	YER156C	P40093	338 aa	Known RBP	7.26	□□□□□ -1.25
LDS1	YAL018C	THI3	Q07471	609 aa		7.26	□□□□□ -1.25
LDS1	YAL018C	PSF3	Q12146	194 aa		7.26	□□□□□ -1.25
LDS1	YAL018C	MAM3	Q12296	706 aa		7.26	□□□□□ -1.25
LDS1	YAL018C	PDR18	P53756	1333 aa		7.26	□□□□□ -1.25
LDS1	YAL018C	RIM15	P43565	1770 aa		7.25	□□□□□ -1.25
LDS1	YAL018C	NOT3	P06102	836 aa	Known RBP	7.25	□□□□□ -1.25
LDS1	YAL018C	RPC31	P17890	251 aa		7.25	□□□□□ -1.25
LDS1	YAL018C	KRE2	P27809	442 aa		7.25	□□□□□ -1.25
LDS1	YAL018C	MRF1	P30775	413 aa	Predicted RBP	7.25	□□□□□ -1.25
LDS1	YAL018C	MGM1	P32266	881 aa		7.25	□□□□□ -1.25
LDS1	YAL018C	GCD11	P32481	527 aa	Known RBP	7.25	□□□□□ -1.25
LDS1	YAL018C	ECM21	P38167	1117 aa	Known RBP	7.25	□□□□□ -1.25
LDS1	YAL018C	ERF2	Q06551	359 aa		7.25	□□□□□ -1.25
LDS1	YAL018C	BRE1	Q07457	700 aa	Known RBP	7.25	□□□□□ -1.25
LDS1	YAL018C	POM152	P39685	1337 aa		7.25	□□□□□ -1.25
LDS1	YAL018C	YKU70	P32807	602 aa		7.24	□□□□□ -1.25
LDS1	YAL018C	RRI2	Q12348	645 aa		7.24	□□□□□ -1.25
LDS1	YAL018C	CAF20	P12962	161 aa	Known RBP	7.23	□□□□□ -1.25
LDS1	YAL018C	OSH3	P38713	996 aa	Known RBP	7.23	□□□□□ -1.25
LDS1	YAL018C	NUP42	P49686	430 aa	Known RBP	7.23	□□□□□ -1.25
LDS1	YAL018C	KIN4	Q01919	800 aa		7.23	□□□□□ -1.25
LDS1	YAL018C	VAS1	P07806	1104 aa	Known RBP	7.22	□□□□□ -1.25
LDS1	YAL018C	KEX2	P13134	814 aa		7.22	□□□□□ -1.25
LDS1	YAL018C	SHC1	P39000	512 aa		7.22	□□□□□ -1.25
LDS1	YAL018C	ALO1	P54783	526 aa	Known RBP	7.22	□□□□□ -1.25
LDS1	YAL018C	SSA1	P10591	642 aa	Known RBP	7.21	□□□□□ -1.26
LDS1	YAL018C	RET1	P22276	1149 aa	Known RBP	7.21	□□□□□ -1.26
LDS1	YAL018C	GEF1	P37020	779 aa		7.21	□□□□□ -1.26
LDS1	YAL018C	SPL2	P38839	148 aa		7.21	□□□□□ -1.26
LDS1	YAL018C	YNL193W	P53870	558 aa		7.21	□□□□□ -1.26
LDS1	YAL018C	CYB2	P00175	591 aa		7.2	□□□□□ -1.26
LDS1	YAL018C	ERG12	P07277	443 aa		7.2	□□□□□ -1.26
LDS1	YAL018C	TPM1	P17536	199 aa	Known RBP	7.2	□□□□□ -1.26
LDS1	YAL018C	KTR1	P27810	393 aa	Known RBP	7.2	□□□□□ -1.26
LDS1	YAL018C	ICL1	P28240	557 aa	Predicted RBP	7.2	□□□□□ -1.26
LDS1	YAL018C	GLO3	P38682	493 aa	Known RBP	7.2	□□□□□ -1.26
LDS1	YAL018C	ENP2	P48234	707 aa	Known RBP	7.2	□□□□□ -1.26
LDS1	YAL018C	RPT4	P53549	437 aa	Known RBP	7.2	□□□□□ -1.26
LDS1	YAL018C	GCR2	Q01722	534 aa		7.2	□□□□□ -1.26
LDS1	YAL018C	RPN7	Q06103	429 aa	Known RBP	7.2	□□□□□ -1.26
LDS1	YAL018C	SPT16	P32558	1035 aa	Known RBP	7.19	□□□□□ -1.26
LDS1	YAL018C	SLA1	P32790	1244 aa		7.19	□□□□□ -1.26
LDS1	YAL018C	PBY1	P38254	753 aa		7.19	□□□□□ -1.26
LDS1	YAL018C	HAL5	P38970	855 aa	Known RBP	7.19	□□□□□ -1.26
LDS1	YAL018C	RRN7	P40992	514 aa		7.19	□□□□□ -1.26
LDS1	YAL018C	JJJ2	P46997	583 aa		7.19	□□□□□ -1.26
LDS1	YAL018C	CLA4	P48562	842 aa		7.19	□□□□□ -1.26
LDS1	YAL018C	FPK1	P53739	893 aa		7.19	□□□□□ -1.26
LDS1	YAL018C	FPR4	Q06205	392 aa	Predicted RBP	7.19	□□□□□ -1.26
LDS1	YAL018C	OPI1	P21957	404 aa		7.18	□□□□□ -1.26
LDS1	YAL018C	LCB1	P25045	558 aa	Known RBP	7.18	□□□□□ -1.26
LDS1	YAL018C	KTR3	P38130	404 aa	Predicted RBP	7.18	□□□□□ -1.26
LDS1	YAL018C	YFH7	P43591	353 aa		7.18	□□□□□ -1.26
LDS1	YAL018C	MRPS35	P53292	345 aa		7.18	□□□□□ -1.26
LDS1	YAL018C	IRC4	Q03036	179 aa		7.18	□□□□□ -1.26
LDS1	YAL018C	PRP42	Q03776	544 aa	Known RBP	7.18	□□□□□ -1.26
LDS1	YAL018C	BRN1	P38170	754 aa		7.17	□□□□□ -1.26
LDS1	YAL018C	STM1	P39015	273 aa	Known RBP	7.17	□□□□□ -1.26
LDS1	YAL018C	CRF1	Q04930	467 aa		7.17	□□□□□ -1.26
LDS1	YAL018C	ACK1	Q07622	623 aa	Predicted RBP	7.17	□□□□□ -1.26
LDS1	YAL018C	TOP1	P04786	769 aa		7.16	□□□□□ -1.26
LDS1	YAL018C	MSM1	P22438	575 aa		7.16	□□□□□ -1.26
LDS1	YAL018C	CLB5	P30283	435 aa		7.16	□□□□□ -1.26
LDS1	YAL018C	AIR1	P40507	360 aa	Known RBP	7.16	□□□□□ -1.26
LDS1	YAL018C	YIR014W	P40570	242 aa		7.16	□□□□□ -1.26
LDS1	YAL018C	IOC3	P43596	787 aa		7.16	□□□□□ -1.26
LDS1	YAL018C	RMD1	Q03441	430 aa		7.16	□□□□□ -1.26
LDS1	YAL018C	RIM20	Q12033	661 aa		7.16	□□□□□ -1.26
LDS1	YAL018C	WRS1	Q12109	432 aa	Known RBP	7.16	□□□□□ -1.26

Retrieved 100 of 5,963 RNA–protein pairs in 53.3 ms