RNA–Protein interactions for RNA: ENST00000641991.1

CASC19-272, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,360 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-272ENST00000641991 PMFBP1Q8TBY8 1022 aa15.49■□□□□ 0.07
CASC19-272ENST00000641991 C19orf44Q9H6X5 657 aa15.49■□□□□ 0.07
CASC19-272ENST00000641991 OVOS2A0A0J9YW53 1432 aa15.49■□□□□ 0.07
CASC19-272ENST00000641991 OVOS2Q6IE36 1432 aa15.49■□□□□ 0.07
CASC19-272ENST00000641991 RGPD8O14715 1765 aaPredicted RBP15.49■□□□□ 0.07
CASC19-272ENST00000641991 MTHFSP49914 203 aa15.49■□□□□ 0.07
CASC19-272ENST00000641991 NGDNQ8NEJ9 315 aaKnown RBP15.49■□□□□ 0.07
CASC19-272ENST00000641991 PHF8Q9UPP1 1060 aa15.49■□□□□ 0.07
CASC19-272ENST00000641991 TTC21AQ8NDW8 1320 aa15.48■□□□□ 0.07
CASC19-272ENST00000641991 ZRANB1Q9UGI0 708 aa15.48■□□□□ 0.07
CASC19-272ENST00000641991 LRRC7Q96NW7 1537 aa15.47■□□□□ 0.07
CASC19-272ENST00000641991 SMG6Q86US8 1419 aaKnown RBP15.47■□□□□ 0.07
CASC19-272ENST00000641991 ZBED9Q6R2W3 1325 aa15.47■□□□□ 0.07
CASC19-272ENST00000641991 ZNF335Q9H4Z2 1342 aaPredicted RBP15.47■□□□□ 0.07
CASC19-272ENST00000641991 COL3A1P02461 1466 aaPredicted RBP15.47■□□□□ 0.07
CASC19-272ENST00000641991 C1orf167Q5SNV9 1468 aa15.47■□□□□ 0.07
CASC19-272ENST00000641991 MST1RQ04912 1400 aa15.47■□□□□ 0.07
CASC19-272ENST00000641991 AATKQ6ZMQ8 1374 aa15.46■□□□□ 0.07
CASC19-272ENST00000641991 SHPRHQ149N8 1683 aa15.46■□□□□ 0.07
CASC19-272ENST00000641991 USP31Q70CQ4 1352 aa15.45■□□□□ 0.06
CASC19-272ENST00000641991 WDR43Q15061 677 aaKnown RBP eCLIP15.45■□□□□ 0.06
CASC19-272ENST00000641991 COG3Q96JB2 828 aa15.45■□□□□ 0.06
CASC19-272ENST00000641991 ADAMTS8Q9UP79 889 aa15.45■□□□□ 0.06
CASC19-272ENST00000641991 PNPLA6Q8IY17 1366 aa15.44■□□□□ 0.06
CASC19-272ENST00000641991 CFAP53Q96M91 514 aa15.44■□□□□ 0.06
CASC19-272ENST00000641991 DMRT2Q9Y5R5 561 aa15.44■□□□□ 0.06
CASC19-272ENST00000641991 PIK3C2AO00443 1686 aa15.44■□□□□ 0.06
CASC19-272ENST00000641991 ESCO1Q5FWF5 840 aa15.43■□□□□ 0.06
CASC19-272ENST00000641991 MSH6P52701 1360 aa15.43■□□□□ 0.06
CASC19-272ENST00000641991 KIF1AQ12756 1690 aa15.42■□□□□ 0.06
CASC19-272ENST00000641991 USP54Q70EL1 1684 aa15.42■□□□□ 0.06
CASC19-272ENST00000641991 CDK12Q9NYV4 1490 aaPredicted RBP15.42■□□□□ 0.06
CASC19-272ENST00000641991 ATF3P18847 181 aa15.42■□□□□ 0.06
CASC19-272ENST00000641991 ORAI2Q96SN7 254 aa15.42■□□□□ 0.06
CASC19-272ENST00000641991 POLKQ9UBT6 870 aa15.42■□□□□ 0.06
CASC19-272ENST00000641991 XIRP1Q702N8 1843 aaKnown RBP15.42■□□□□ 0.06
CASC19-272ENST00000641991 CADPS2Q86UW7 1296 aa15.4■□□□□ 0.06
CASC19-272ENST00000641991 FBLN1P23142 703 aa15.39■□□□□ 0.05
CASC19-272ENST00000641991 EMILIN1Q9Y6C2 1016 aa15.38■□□□□ 0.05
CASC19-272ENST00000641991 MARF1Q9Y4F3 1742 aaKnown RBP15.38■□□□□ 0.05
CASC19-272ENST00000641991 TRPM3Q9HCF6 1732 aaPredicted RBP15.37■□□□□ 0.05
CASC19-272ENST00000641991 IQSEC2Q5JU85 1478 aa15.36■□□□□ 0.05
CASC19-272ENST00000641991 FOXO3O43524 673 aa15.36■□□□□ 0.05
CASC19-272ENST00000641991 PSME1Q06323 249 aa15.36■□□□□ 0.05
CASC19-272ENST00000641991 DIAPH1O60610 1272 aaKnown RBP15.35■□□□□ 0.05
CASC19-272ENST00000641991 RRS1Q15050 365 aaKnown RBP15.35■□□□□ 0.05
CASC19-272ENST00000641991 PEAK1Q9H792 1746 aa15.34■□□□□ 0.05
CASC19-272ENST00000641991 SENP3-EIF4A1A0A087X0R7 540 aa15.34■□□□□ 0.05
CASC19-272ENST00000641991 PAK3O75914 559 aaPredicted RBP15.34■□□□□ 0.05
CASC19-272ENST00000641991 NLRP6P59044 892 aa15.34■□□□□ 0.05
CASC19-272ENST00000641991 CCDC146Q8IYE0 955 aa15.34■□□□□ 0.05
CASC19-272ENST00000641991 ABTB2Q8N961 1025 aa15.34■□□□□ 0.05
CASC19-272ENST00000641991 NUDCQ9Y266 331 aa15.34■□□□□ 0.05
CASC19-272ENST00000641991 PPM1GO15355 546 aaPredicted RBP15.33■□□□□ 0.04
CASC19-272ENST00000641991 NFAT5O94916 1531 aa15.33■□□□□ 0.04
CASC19-272ENST00000641991 LTBP4Q8N2S1 1624 aa15.32■□□□□ 0.04
CASC19-272ENST00000641991 MAP3K19Q56UN5 1328 aa15.32■□□□□ 0.04
CASC19-272ENST00000641991 U2AF1L5P0DN76 240 aaPredicted RBP15.32■□□□□ 0.04
CASC19-272ENST00000641991 U2AF1Q01081 240 aaKnown RBP eCLIP15.32■□□□□ 0.041e-15■■■□□ 14.9
CASC19-272ENST00000641991 XPCQ01831 940 aaPredicted RBP15.32■□□□□ 0.04
CASC19-272ENST00000641991 NUTM2GQ5VZR2 741 aa15.32■□□□□ 0.04
CASC19-272ENST00000641991 KRT28Q7Z3Y7 464 aa15.32■□□□□ 0.04
CASC19-272ENST00000641991 PXDNQ92626 1479 aa15.32■□□□□ 0.04
CASC19-272ENST00000641991 SBNO1A3KN83 1393 aa15.31■□□□□ 0.04
CASC19-272ENST00000641991 SLIT3O75094 1523 aa15.31■□□□□ 0.04
CASC19-272ENST00000641991 IL13P35225 146 aa15.31■□□□□ 0.04
CASC19-272ENST00000641991 USP19O94966 1318 aa15.3■□□□□ 0.04
CASC19-272ENST00000641991 NPHP3Q7Z494 1330 aa15.3■□□□□ 0.04
CASC19-272ENST00000641991 ZNF521Q96K83 1311 aa15.3■□□□□ 0.04
CASC19-272ENST00000641991 APAF1O14727 1248 aa15.3■□□□□ 0.04
CASC19-272ENST00000641991 BRINP3Q76B58 766 aa15.3■□□□□ 0.04
CASC19-272ENST00000641991 RUNDC1Q96C34 613 aa15.3■□□□□ 0.04
CASC19-272ENST00000641991 FLT4P35916 1363 aa15.3■□□□□ 0.04
CASC19-272ENST00000641991 KIF24Q5T7B8 1368 aa15.3■□□□□ 0.04
CASC19-272ENST00000641991 ALS2Q96Q42 1657 aa15.3■□□□□ 0.04
CASC19-272ENST00000641991 MAP2P11137 1827 aaKnown RBP15.3■□□□□ 0.04
CASC19-272ENST00000641991 U2SURPO15042 1029 aaKnown RBP15.29■□□□□ 0.04
CASC19-272ENST00000641991 SOX12O15370 315 aa15.29■□□□□ 0.04
CASC19-272ENST00000641991 NGEFQ8N5V2 710 aa15.29■□□□□ 0.04
CASC19-272ENST00000641991 SLAIN2Q9P270 581 aa15.29■□□□□ 0.04
CASC19-272ENST00000641991 PDE3BQ13370 1112 aa15.28■□□□□ 0.04
CASC19-272ENST00000641991 PLEKHF1Q96S99 279 aa15.28■□□□□ 0.04
CASC19-272ENST00000641991 RTL1A6NKG5 1358 aa15.28■□□□□ 0.04
CASC19-272ENST00000641991 TNS3Q68CZ2 1445 aa15.27■□□□□ 0.04
CASC19-272ENST00000641991 DDX17Q92841 729 aaKnown RBP15.27■□□□□ 0.04
CASC19-272ENST00000641991 SALL2Q9Y467 1007 aaPredicted RBP15.27■□□□□ 0.04
CASC19-272ENST00000641991 EIF4A2Q14240 407 aaKnown RBP15.26■□□□□ 0.03
CASC19-272ENST00000641991 HSP90AB2PQ58FF8 381 aa15.26■□□□□ 0.03
CASC19-272ENST00000641991 RSPH6AQ9H0K4 717 aa15.26■□□□□ 0.03
CASC19-272ENST00000641991 FCHSD2O94868 740 aa15.25■□□□□ 0.03
CASC19-272ENST00000641991 NCBP3Q53F19 620 aaKnown RBP15.25■□□□□ 0.03
CASC19-272ENST00000641991 TCP11L2Q8N4U5 519 aa15.25■□□□□ 0.03
CASC19-272ENST00000641991 PHF23Q9BUL5 403 aaPredicted RBP15.25■□□□□ 0.03
CASC19-272ENST00000641991 RGPD1P0DJD0 1748 aa15.25■□□□□ 0.03
CASC19-272ENST00000641991 PHRF1Q9P1Y6 1649 aaKnown RBP15.25■□□□□ 0.03
CASC19-272ENST00000641991 MED1Q15648 1581 aaPredicted RBP15.25■□□□□ 0.03
CASC19-272ENST00000641991 KCNH5Q8NCM2 988 aa15.24■□□□□ 0.03
CASC19-272ENST00000641991 HOXC9P31274 260 aa15.24■□□□□ 0.03
CASC19-272ENST00000641991 AMPHP49418 695 aa15.24■□□□□ 0.03
CASC19-272ENST00000641991 SOS2Q07890 1332 aaPredicted RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms