RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 ADAMTS8Q9UP79 889 aa23.6■■□□□ 1.37
PHGDH-232ENST00000641947 MTHFSP49914 203 aa23.59■■□□□ 1.37
PHGDH-232ENST00000641947 PIK3C2AO00443 1686 aa23.57■■□□□ 1.36
PHGDH-232ENST00000641947 TTC21BQ7Z4L5 1316 aa23.57■■□□□ 1.36
PHGDH-232ENST00000641947 COL3A1P02461 1466 aaPredicted RBP23.57■■□□□ 1.36
PHGDH-232ENST00000641947 PROSER2Q86WR7 435 aaPredicted RBP23.57■■□□□ 1.36
PHGDH-232ENST00000641947 MARF1Q9Y4F3 1742 aaKnown RBP23.57■■□□□ 1.36
PHGDH-232ENST00000641947 FBLN1P23142 703 aa23.55■■□□□ 1.36
PHGDH-232ENST00000641947 WDR43Q15061 677 aaKnown RBP eCLIP23.54■■□□□ 1.36
PHGDH-232ENST00000641947 TMEM94Q12767 1356 aa23.53■■□□□ 1.36
PHGDH-232ENST00000641947 OVOS2A0A0J9YW53 1432 aa23.53■■□□□ 1.36
PHGDH-232ENST00000641947 OVOS2Q6IE36 1432 aa23.53■■□□□ 1.36
PHGDH-232ENST00000641947 SCAF1Q9H7N4 1312 aaKnown RBP23.53■■□□□ 1.36
PHGDH-232ENST00000641947 C14orf37Q86TY3 774 aa23.52■■□□□ 1.36
PHGDH-232ENST00000641947 NGDNQ8NEJ9 315 aaKnown RBP23.51■■□□□ 1.35
PHGDH-232ENST00000641947 USP54Q70EL1 1684 aa23.51■■□□□ 1.35
PHGDH-232ENST00000641947 SMG6Q86US8 1419 aaKnown RBP23.49■■□□□ 1.35
PHGDH-232ENST00000641947 PHF8Q9UPP1 1060 aa23.48■■□□□ 1.35
PHGDH-232ENST00000641947 GTF3C3Q9Y5Q9 886 aa23.48■■□□□ 1.35
PHGDH-232ENST00000641947 COG3Q96JB2 828 aa23.47■■□□□ 1.35
PHGDH-232ENST00000641947 POLKQ9UBT6 870 aa23.47■■□□□ 1.35
PHGDH-232ENST00000641947 PNPLA6Q8IY17 1366 aa23.47■■□□□ 1.35
PHGDH-232ENST00000641947 AATKQ6ZMQ8 1374 aa23.47■■□□□ 1.35
PHGDH-232ENST00000641947 TTC21AQ8NDW8 1320 aa23.46■■□□□ 1.35
PHGDH-232ENST00000641947 NCOA3Q9Y6Q9 1424 aa23.46■■□□□ 1.35
PHGDH-232ENST00000641947 PEAK1Q9H792 1746 aa23.46■■□□□ 1.35
PHGDH-232ENST00000641947 CCDC146Q8IYE0 955 aa23.45■■□□□ 1.34
PHGDH-232ENST00000641947 CFAP53Q96M91 514 aa23.45■■□□□ 1.34
PHGDH-232ENST00000641947 C19orf44Q9H6X5 657 aa23.45■■□□□ 1.34
PHGDH-232ENST00000641947 C1orf167Q5SNV9 1468 aa23.45■■□□□ 1.34
PHGDH-232ENST00000641947 KIF1AQ12756 1690 aa23.45■■□□□ 1.34
PHGDH-232ENST00000641947 LRRC7Q96NW7 1537 aa23.45■■□□□ 1.34
PHGDH-232ENST00000641947 ZNF335Q9H4Z2 1342 aaPredicted RBP23.45■■□□□ 1.34
PHGDH-232ENST00000641947 SALL2Q9Y467 1007 aaPredicted RBP23.45■■□□□ 1.34
PHGDH-232ENST00000641947 MST1RQ04912 1400 aa23.44■■□□□ 1.34
PHGDH-232ENST00000641947 ESCO1Q5FWF5 840 aa23.44■■□□□ 1.34
PHGDH-232ENST00000641947 ORAI2Q96SN7 254 aa23.44■■□□□ 1.34
PHGDH-232ENST00000641947 EMILIN1Q9Y6C2 1016 aa23.44■■□□□ 1.34
PHGDH-232ENST00000641947 DCCP43146 1447 aa23.43■■□□□ 1.34
PHGDH-232ENST00000641947 TRPM3Q9HCF6 1732 aaPredicted RBP23.43■■□□□ 1.34
PHGDH-232ENST00000641947 CDK12Q9NYV4 1490 aaPredicted RBP23.43■■□□□ 1.34
PHGDH-232ENST00000641947 USP31Q70CQ4 1352 aa23.43■■□□□ 1.34
PHGDH-232ENST00000641947 RRS1Q15050 365 aaKnown RBP23.4■■□□□ 1.34
PHGDH-232ENST00000641947 IQSEC2Q5JU85 1478 aa23.4■■□□□ 1.34
PHGDH-232ENST00000641947 PPM1GO15355 546 aaPredicted RBP23.37■■□□□ 1.33
PHGDH-232ENST00000641947 APAF1O14727 1248 aa23.35■■□□□ 1.33
PHGDH-232ENST00000641947 DIAPH1O60610 1272 aaKnown RBP23.35■■□□□ 1.33
PHGDH-232ENST00000641947 ATF3P18847 181 aa23.35■■□□□ 1.33
PHGDH-232ENST00000641947 NUTM2GQ5VZR2 741 aa23.35■■□□□ 1.33
PHGDH-232ENST00000641947 MSH6P52701 1360 aa23.34■■□□□ 1.33
PHGDH-232ENST00000641947 FOXO3O43524 673 aa23.34■■□□□ 1.33
PHGDH-232ENST00000641947 PAK3O75914 559 aaPredicted RBP23.34■■□□□ 1.33
PHGDH-232ENST00000641947 U2AF1L5P0DN76 240 aaPredicted RBP23.34■■□□□ 1.33
PHGDH-232ENST00000641947 U2AF1Q01081 240 aaKnown RBP eCLIP23.34■■□□□ 1.33
PHGDH-232ENST00000641947 LTN1O94822 1766 aa23.34■■□□□ 1.33
PHGDH-232ENST00000641947 ZNF521Q96K83 1311 aa23.34■■□□□ 1.33
PHGDH-232ENST00000641947 ALS2Q96Q42 1657 aa23.33■■□□□ 1.32
PHGDH-232ENST00000641947 SOX12O15370 315 aa23.32■■□□□ 1.32
PHGDH-232ENST00000641947 NLRP6P59044 892 aa23.32■■□□□ 1.32
PHGDH-232ENST00000641947 XPCQ01831 940 aaPredicted RBP23.32■■□□□ 1.32
PHGDH-232ENST00000641947 PSME1Q06323 249 aa23.32■■□□□ 1.32
PHGDH-232ENST00000641947 NUDCQ9Y266 331 aa23.32■■□□□ 1.32
PHGDH-232ENST00000641947 U2SURPO15042 1029 aaKnown RBP23.32■■□□□ 1.32
PHGDH-232ENST00000641947 ABTB2Q8N961 1025 aa23.32■■□□□ 1.32
PHGDH-232ENST00000641947 CDCA7LQ96GN5 454 aa23.32■■□□□ 1.32
PHGDH-232ENST00000641947 RUNDC1Q96C34 613 aa23.31■■□□□ 1.32
PHGDH-232ENST00000641947 RGPD1P0DJD0 1748 aa23.31■■□□□ 1.32
PHGDH-232ENST00000641947 IL13P35225 146 aa23.3■■□□□ 1.32
PHGDH-232ENST00000641947 CADPS2Q86UW7 1296 aa23.3■■□□□ 1.32
PHGDH-232ENST00000641947 NFAT5O94916 1531 aa23.3■■□□□ 1.32
PHGDH-232ENST00000641947 PLEKHF1Q96S99 279 aa23.29■■□□□ 1.32
PHGDH-232ENST00000641947 MAP3K19Q56UN5 1328 aa23.29■■□□□ 1.32
PHGDH-232ENST00000641947 PDE3BQ13370 1112 aa23.27■■□□□ 1.32
PHGDH-232ENST00000641947 SUPT16HQ9Y5B9 1047 aaKnown RBP23.27■■□□□ 1.32
PHGDH-232ENST00000641947 TCP11L2Q8N4U5 519 aa23.26■■□□□ 1.31
PHGDH-232ENST00000641947 DDX17Q92841 729 aaKnown RBP23.26■■□□□ 1.31
PHGDH-232ENST00000641947 RRP7AQ9Y3A4 280 aaKnown RBP23.25■■□□□ 1.31
PHGDH-232ENST00000641947 DMRT2Q9Y5R5 561 aa23.25■■□□□ 1.31
PHGDH-232ENST00000641947 SLIT3O75094 1523 aa23.25■■□□□ 1.31
PHGDH-232ENST00000641947 HSP90AB2PQ58FF8 381 aa23.24■■□□□ 1.31
PHGDH-232ENST00000641947 KRT28Q7Z3Y7 464 aa23.24■■□□□ 1.31
PHGDH-232ENST00000641947 SBNO1A3KN83 1393 aa23.24■■□□□ 1.31
PHGDH-232ENST00000641947 EIF4A2Q14240 407 aaKnown RBP23.23■■□□□ 1.31
PHGDH-232ENST00000641947 RSPH6AQ9H0K4 717 aa23.23■■□□□ 1.31
PHGDH-232ENST00000641947 PXDNQ92626 1479 aa23.23■■□□□ 1.31
PHGDH-232ENST00000641947 PHRF1Q9P1Y6 1649 aaKnown RBP23.23■■□□□ 1.31
PHGDH-232ENST00000641947 FLT4P35916 1363 aa23.22■■□□□ 1.31
PHGDH-232ENST00000641947 DLG5Q8TDM6 1919 aa23.22■■□□□ 1.31
PHGDH-232ENST00000641947 PHF23Q9BUL5 403 aaPredicted RBP23.21■■□□□ 1.31
PHGDH-232ENST00000641947 MED1Q15648 1581 aaPredicted RBP23.21■■□□□ 1.31
PHGDH-232ENST00000641947 CRYBG1Q9Y4K1 1723 aa23.21■■□□□ 1.31
PHGDH-232ENST00000641947 HMOX1P09601 288 aa23.2■■□□□ 1.3
PHGDH-232ENST00000641947 NEUROD2Q15784 382 aa23.2■■□□□ 1.3
PHGDH-232ENST00000641947 SPINK5Q9NQ38 1064 aaPredicted RBP23.2■■□□□ 1.3
PHGDH-232ENST00000641947 LTBP4Q8N2S1 1624 aa23.2■■□□□ 1.3
PHGDH-232ENST00000641947 FCHSD2O94868 740 aa23.19■■□□□ 1.3
PHGDH-232ENST00000641947 BRINP3Q76B58 766 aa23.19■■□□□ 1.3
PHGDH-232ENST00000641947 WWC1Q8IX03 1113 aa23.19■■□□□ 1.3
PHGDH-232ENST00000641947 NGEFQ8N5V2 710 aa23.18■■□□□ 1.3
PHGDH-232ENST00000641947 USP19O94966 1318 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms