RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 PNPLA6Q8IY17 1366 aa22■■□□□ 1.11
PHGDH-229ENST00000641891 TECPR2O15040 1411 aa22■■□□□ 1.11
PHGDH-229ENST00000641891 CPSF1Q10570 1443 aaKnown RBP22■■□□□ 1.11
PHGDH-229ENST00000641891 DIAPH1O60610 1272 aaKnown RBP22■■□□□ 1.11
PHGDH-229ENST00000641891 CANXP27824 592 aaKnown RBP22■■□□□ 1.11
PHGDH-229ENST00000641891 PANK1Q8TE04 598 aa22■■□□□ 1.11
PHGDH-229ENST00000641891 ERICH6Q7L0X2 663 aa21.99■■□□□ 1.11
PHGDH-229ENST00000641891 FRAT1Q92837 279 aaPredicted RBP21.99■■□□□ 1.11
PHGDH-229ENST00000641891 FAM135BQ49AJ0 1406 aa21.99■■□□□ 1.11
PHGDH-229ENST00000641891 PPM1GO15355 546 aaPredicted RBP21.99■■□□□ 1.11
PHGDH-229ENST00000641891 TMPOP42166 694 aaKnown RBP21.99■■□□□ 1.11
PHGDH-229ENST00000641891 NUDT16Q96DE0 195 aaKnown RBP21.99■■□□□ 1.11
PHGDH-229ENST00000641891 BCL2L13Q9BXK5 485 aa21.99■■□□□ 1.11
PHGDH-229ENST00000641891 NCBP3Q53F19 620 aaKnown RBP21.98■■□□□ 1.11
PHGDH-229ENST00000641891 BACH2Q9BYV9 841 aa21.98■■□□□ 1.11
PHGDH-229ENST00000641891 ZRANB1Q9UGI0 708 aa21.98■■□□□ 1.11
PHGDH-229ENST00000641891 ADAMTS13Q76LX8 1427 aa21.98■■□□□ 1.11
PHGDH-229ENST00000641891 NME9Q86XW9 330 aa21.98■■□□□ 1.11
PHGDH-229ENST00000641891 POLKQ9UBT6 870 aa21.98■■□□□ 1.11
PHGDH-229ENST00000641891 TRIM35Q9UPQ4 493 aa21.98■■□□□ 1.11
PHGDH-229ENST00000641891 MAPK8IP3Q9UPT6 1336 aa21.98■■□□□ 1.11
PHGDH-229ENST00000641891 EDC4Q6P2E9 1401 aaKnown RBP21.97■■□□□ 1.11
PHGDH-229ENST00000641891 ROBO2Q9HCK4 1378 aa21.97■■□□□ 1.11
PHGDH-229ENST00000641891 ANP32AP39687 249 aaKnown RBP21.97■■□□□ 1.11
PHGDH-229ENST00000641891 PDE3AQ14432 1141 aa21.97■■□□□ 1.11
PHGDH-229ENST00000641891 MYH16Q9H6N6 1097 aa21.97■■□□□ 1.11
PHGDH-229ENST00000641891 COG6Q9Y2V7 657 aa21.97■■□□□ 1.11
PHGDH-229ENST00000641891 LTKP29376 864 aa21.97■■□□□ 1.11
PHGDH-229ENST00000641891 TSR2Q969E8 191 aaKnown RBP21.97■■□□□ 1.11
PHGDH-229ENST00000641891 TNNQ9UQP3 1299 aa21.97■■□□□ 1.11
PHGDH-229ENST00000641891 CDC42BPGQ6DT37 1551 aa21.96■■□□□ 1.11
PHGDH-229ENST00000641891 PLPPR3Q6T4P5 718 aa21.95■■□□□ 1.1
PHGDH-229ENST00000641891 SIRT1Q96EB6 747 aa21.95■■□□□ 1.1
PHGDH-229ENST00000641891 PRR36Q9H6K5 1346 aa21.94■■□□□ 1.1
PHGDH-229ENST00000641891 LRRC7Q96NW7 1537 aa21.94■■□□□ 1.1
PHGDH-229ENST00000641891 MAP2P11137 1827 aaKnown RBP21.94■■□□□ 1.1
PHGDH-229ENST00000641891 NPM2Q86SE8 214 aaKnown RBP21.94■■□□□ 1.1
PHGDH-229ENST00000641891 MON2Q7Z3U7 1717 aa21.93■■□□□ 1.1
PHGDH-229ENST00000641891 EMILIN1Q9Y6C2 1016 aa21.93■■□□□ 1.1
PHGDH-229ENST00000641891 PAK3O75914 559 aaPredicted RBP21.92■■□□□ 1.1
PHGDH-229ENST00000641891 CCDC61Q9Y6R9 512 aa21.92■■□□□ 1.1
PHGDH-229ENST00000641891 RLBP1P12271 317 aa21.92■■□□□ 1.1
PHGDH-229ENST00000641891 RIPK4P57078 832 aa21.92■■□□□ 1.1
PHGDH-229ENST00000641891 NOP58Q9Y2X3 529 aaKnown RBP21.92■■□□□ 1.1
PHGDH-229ENST00000641891 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.92■■□□□ 1.1
PHGDH-229ENST00000641891 IGHDP01880 384 aa21.91■■□□□ 1.1
PHGDH-229ENST00000641891 IPO9Q96P70 1041 aaKnown RBP21.91■■□□□ 1.1
PHGDH-229ENST00000641891 PLEKHG1Q9ULL1 1385 aa21.91■■□□□ 1.1
PHGDH-229ENST00000641891 C3P01024 1663 aa21.91■■□□□ 1.1
PHGDH-229ENST00000641891 AKAP12Q02952 1782 aa21.91■■□□□ 1.1
PHGDH-229ENST00000641891 ITSN1Q15811 1721 aa21.9■■□□□ 1.1
PHGDH-229ENST00000641891 CLUAP1Q96AJ1 413 aa21.89■■□□□ 1.1
PHGDH-229ENST00000641891 SLC26A8Q96RN1 970 aa21.89■■□□□ 1.1
PHGDH-229ENST00000641891 RSPH6AQ9H0K4 717 aa21.89■■□□□ 1.1
PHGDH-229ENST00000641891 PRKAR2BP31323 418 aa21.89■■□□□ 1.09
PHGDH-229ENST00000641891 EXOSC9Q06265 439 aaKnown RBP21.89■■□□□ 1.09
PHGDH-229ENST00000641891 HMOX1P09601 288 aa21.88■■□□□ 1.09
PHGDH-229ENST00000641891 PTPRUQ92729 1446 aa21.88■■□□□ 1.09
PHGDH-229ENST00000641891 NUTM2FA1L443 756 aa21.87■■□□□ 1.09
PHGDH-229ENST00000641891 FCHSD2O94868 740 aa21.87■■□□□ 1.09
PHGDH-229ENST00000641891 RGS3P49796 1198 aa21.87■■□□□ 1.09
PHGDH-229ENST00000641891 RRS1Q15050 365 aaKnown RBP21.86■■□□□ 1.09
PHGDH-229ENST00000641891 COG3Q96JB2 828 aa21.86■■□□□ 1.09
PHGDH-229ENST00000641891 PNNQ9H307 717 aaKnown RBP21.86■■□□□ 1.09
PHGDH-229ENST00000641891 CDK12Q9NYV4 1490 aaPredicted RBP21.85■■□□□ 1.09
PHGDH-229ENST00000641891 FER1L4A9Z1Z3 1794 aa21.85■■□□□ 1.09
PHGDH-229ENST00000641891 IL13P35225 146 aa21.84■■□□□ 1.09
PHGDH-229ENST00000641891 PHACTR3Q96KR7 559 aa21.84■■□□□ 1.09
PHGDH-229ENST00000641891 IL16Q14005 1332 aa21.84■■□□□ 1.09
PHGDH-229ENST00000641891 AATKQ6ZMQ8 1374 aa21.84■■□□□ 1.09
PHGDH-229ENST00000641891 TOPAZ1Q8N9V7 1692 aa21.83■■□□□ 1.08
PHGDH-229ENST00000641891 EID1Q9Y6B2 187 aa21.82■■□□□ 1.08
PHGDH-229ENST00000641891 SMC4Q9NTJ3 1288 aa21.82■■□□□ 1.08
PHGDH-229ENST00000641891 NRKQ7Z2Y5 1582 aa21.81■■□□□ 1.08
PHGDH-229ENST00000641891 SLIT1O75093 1534 aa21.81■■□□□ 1.08
PHGDH-229ENST00000641891 CT47B1P0C2W7 299 aaPredicted RBP21.81■■□□□ 1.08
PHGDH-229ENST00000641891 SSH1Q8WYL5 1049 aa21.81■■□□□ 1.08
PHGDH-229ENST00000641891 ZNF692Q9BU19 519 aaPredicted RBP21.81■■□□□ 1.08
PHGDH-229ENST00000641891 ARHGAP23Q9P227 1491 aa21.8■■□□□ 1.08
PHGDH-229ENST00000641891 ACEP12821 1306 aa21.8■■□□□ 1.08
PHGDH-229ENST00000641891 ZBTB47Q9UFB7 747 aaPredicted RBP21.8■■□□□ 1.08
PHGDH-229ENST00000641891 PCDHB15Q9Y5E8 787 aa21.8■■□□□ 1.08
PHGDH-229ENST00000641891 ZKSCAN2Q63HK3 967 aa21.8■■□□□ 1.08
PHGDH-229ENST00000641891 C8orf34Q49A92 452 aa21.79■■□□□ 1.08
PHGDH-229ENST00000641891 THUMPD2Q9BTF0 503 aaKnown RBP21.79■■□□□ 1.08
PHGDH-229ENST00000641891 NFE2L2Q16236 605 aa21.78■■□□□ 1.08
PHGDH-229ENST00000641891 AMOTL2Q9Y2J4 779 aa21.78■■□□□ 1.08
PHGDH-229ENST00000641891 TTC21BQ7Z4L5 1316 aa21.78■■□□□ 1.08
PHGDH-229ENST00000641891 NEFMP07197 916 aa21.78■■□□□ 1.08
PHGDH-229ENST00000641891 FAM161AQ3B820 660 aa21.77■■□□□ 1.08
PHGDH-229ENST00000641891 LAS1LQ9Y4W2 734 aaKnown RBP21.77■■□□□ 1.08
PHGDH-229ENST00000641891 MVPQ14764 893 aaKnown RBP21.77■■□□□ 1.07
PHGDH-229ENST00000641891 DZIP1LQ8IYY4 767 aaKnown RBP21.77■■□□□ 1.07
PHGDH-229ENST00000641891 FTSJ3Q8IY81 847 aaKnown RBP21.76■■□□□ 1.07
PHGDH-229ENST00000641891 TRIM27P14373 513 aa21.75■■□□□ 1.07
PHGDH-229ENST00000641891 PLEKHG3A1L390 1219 aa21.75■■□□□ 1.07
PHGDH-229ENST00000641891 USP6P35125 1406 aa21.75■■□□□ 1.07
PHGDH-229ENST00000641891 TRHP20396 242 aaPredicted RBP21.74■■□□□ 1.07
PHGDH-229ENST00000641891 NOB1Q9ULX3 412 aaKnown RBP21.74■■□□□ 1.07
PHGDH-229ENST00000641891 PMFBP1Q8TBY8 1022 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms