RNA–Protein interactions for RNA: ENST00000641458.1

RGPD1-206, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 BASIC

Gene RGPD1, Length 5,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-206ENST00000641458 ROBO1Q9Y6N7 1651 aa8.59□□□□□ -1.03
RGPD1-206ENST00000641458 NCKAP5LQ9HCH0 1330 aa8.59□□□□□ -1.03
RGPD1-206ENST00000641458 NRAPQ86VF7 1730 aa8.59□□□□□ -1.03
RGPD1-206ENST00000641458 PKD1L3Q7Z443 1732 aa8.58□□□□□ -1.04
RGPD1-206ENST00000641458 CICQ96RK0 1608 aaPredicted RBP8.58□□□□□ -1.04
RGPD1-206ENST00000641458 C19orf44Q9H6X5 657 aa8.58□□□□□ -1.04
RGPD1-206ENST00000641458 TRAK1Q9UPV9 953 aa8.58□□□□□ -1.04
RGPD1-206ENST00000641458 CDK19Q9BWU1 502 aa8.58□□□□□ -1.04
RGPD1-206ENST00000641458 CHGAP10645 457 aaKnown RBP8.58□□□□□ -1.04
RGPD1-206ENST00000641458 PLPPR3Q6T4P5 718 aa8.58□□□□□ -1.04
RGPD1-206ENST00000641458 NSD3Q9BZ95 1437 aa8.57□□□□□ -1.04
RGPD1-206ENST00000641458 DIEXFQ68CQ4 756 aaKnown RBP8.57□□□□□ -1.04
RGPD1-206ENST00000641458 TMEM94Q12767 1356 aa8.57□□□□□ -1.04
RGPD1-206ENST00000641458 MYBBP1AQ9BQG0 1328 aaKnown RBP8.56□□□□□ -1.04
RGPD1-206ENST00000641458 VIRMAQ69YN4 1812 aaKnown RBP8.56□□□□□ -1.04
RGPD1-206ENST00000641458 SIPA1L3O60292 1781 aaPredicted RBP8.56□□□□□ -1.04
RGPD1-206ENST00000641458 CPDO75976 1380 aa8.56□□□□□ -1.04
RGPD1-206ENST00000641458 NUDT16Q96DE0 195 aaKnown RBP8.56□□□□□ -1.04
RGPD1-206ENST00000641458 COL14A1Q05707 1796 aaKnown RBP8.55□□□□□ -1.04
RGPD1-206ENST00000641458 SOS2Q07890 1332 aaPredicted RBP8.55□□□□□ -1.04
RGPD1-206ENST00000641458 NGEFQ8N5V2 710 aa8.55□□□□□ -1.04
RGPD1-206ENST00000641458 TERF2IPQ9NYB0 399 aa8.55□□□□□ -1.04
RGPD1-206ENST00000641458 WAPLQ7Z5K2 1190 aa8.54□□□□□ -1.04
RGPD1-206ENST00000641458 SLC26A8Q96RN1 970 aa8.54□□□□□ -1.04
RGPD1-206ENST00000641458 SHANK3Q9BYB0 1731 aa8.54□□□□□ -1.04
RGPD1-206ENST00000641458 ZNF831Q5JPB2 1677 aa8.54□□□□□ -1.04
RGPD1-206ENST00000641458 PANK3Q9H999 370 aa8.53□□□□□ -1.04
RGPD1-206ENST00000641458 CADPS2Q86UW7 1296 aa8.53□□□□□ -1.04
RGPD1-206ENST00000641458 TNS3Q68CZ2 1445 aa8.53□□□□□ -1.04
RGPD1-206ENST00000641458 MSH6P52701 1360 aa8.53□□□□□ -1.04
RGPD1-206ENST00000641458 DLG5Q8TDM6 1919 aa8.53□□□□□ -1.04
RGPD1-206ENST00000641458 PHLPP1O60346 1717 aa8.53□□□□□ -1.04
RGPD1-206ENST00000641458 KDRP35968 1356 aa8.52□□□□□ -1.04
RGPD1-206ENST00000641458 NLRP13Q86W25 1043 aa8.52□□□□□ -1.05
RGPD1-206ENST00000641458 PHF23Q9BUL5 403 aaPredicted RBP8.52□□□□□ -1.05
RGPD1-206ENST00000641458 FYB1O15117 783 aa8.52□□□□□ -1.05
RGPD1-206ENST00000641458 POGKQ9P215 609 aa8.52□□□□□ -1.05
RGPD1-206ENST00000641458 TTC21BQ7Z4L5 1316 aa8.51□□□□□ -1.05
RGPD1-206ENST00000641458 N4BP2Q86UW6 1770 aaPredicted RBP8.51□□□□□ -1.05
RGPD1-206ENST00000641458 RGPD5Q99666 1765 aa8.51□□□□□ -1.05
RGPD1-206ENST00000641458 LRP6O75581 1613 aa8.51□□□□□ -1.05
RGPD1-206ENST00000641458 OVOS2A0A0G2JMS6 1433 aa8.51□□□□□ -1.05
RGPD1-206ENST00000641458 ARHGEF10O15013 1369 aa8.5□□□□□ -1.05
RGPD1-206ENST00000641458 PNISRQ8TF01 805 aaKnown RBP8.5□□□□□ -1.05
RGPD1-206ENST00000641458 SLC12A5Q9H2X9 1139 aa8.5□□□□□ -1.05
RGPD1-206ENST00000641458 ACEP12821 1306 aa8.49□□□□□ -1.05
RGPD1-206ENST00000641458 PAPPAQ13219 1627 aa8.49□□□□□ -1.05
RGPD1-206ENST00000641458 NUTM2DQ5VT03 806 aaPredicted RBP8.49□□□□□ -1.05
RGPD1-206ENST00000641458 HDGFL2Q7Z4V5 671 aaPredicted RBP8.49□□□□□ -1.05
RGPD1-206ENST00000641458 DDX10Q13206 875 aaKnown RBP8.49□□□□□ -1.05
RGPD1-206ENST00000641458 MINK1Q8N4C8 1332 aaPredicted RBP8.48□□□□□ -1.05
RGPD1-206ENST00000641458 CACNA1FO60840 1977 aa8.48□□□□□ -1.05
RGPD1-206ENST00000641458 CABP2Q9NPB3 220 aa8.48□□□□□ -1.05
RGPD1-206ENST00000641458 PPP2R1AP30153 589 aa8.48□□□□□ -1.05
RGPD1-206ENST00000641458 CABP1Q9NZU7 370 aa8.48□□□□□ -1.05
RGPD1-206ENST00000641458 SCN11AQ9UI33 1791 aa8.47□□□□□ -1.05
RGPD1-206ENST00000641458 ZNF521Q96K83 1311 aa8.47□□□□□ -1.05
RGPD1-206ENST00000641458 RGPD2P0DJD1 1756 aa8.47□□□□□ -1.05
RGPD1-206ENST00000641458 PHF8Q9UPP1 1060 aa8.47□□□□□ -1.05
RGPD1-206ENST00000641458 KDM3BQ7LBC6 1761 aa8.47□□□□□ -1.05
RGPD1-206ENST00000641458 ANP32CO43423 234 aa8.47□□□□□ -1.05
RGPD1-206ENST00000641458 SPATA31A3Q5VYP0 1347 aa8.47□□□□□ -1.05
RGPD1-206ENST00000641458 MRC1P22897 1456 aa8.46□□□□□ -1.05
RGPD1-206ENST00000641458 ZNF335Q9H4Z2 1342 aaPredicted RBP8.46□□□□□ -1.05
RGPD1-206ENST00000641458 KNSTRNQ9Y448 316 aa8.46□□□□□ -1.05
RGPD1-206ENST00000641458 NPHP3Q7Z494 1330 aa8.46□□□□□ -1.06
RGPD1-206ENST00000641458 CCDC27Q2M243 656 aa8.46□□□□□ -1.06
RGPD1-206ENST00000641458 UBR2Q8IWV8 1755 aa8.46□□□□□ -1.06
RGPD1-206ENST00000641458 MIER1Q8N108 512 aa8.45□□□□□ -1.06
RGPD1-206ENST00000641458 STK26Q9P289 416 aa8.45□□□□□ -1.06
RGPD1-206ENST00000641458 HSPA2P54652 639 aa8.45□□□□□ -1.06
RGPD1-206ENST00000641458 PROSER2Q86WR7 435 aaPredicted RBP8.45□□□□□ -1.06
RGPD1-206ENST00000641458 THSD7AQ9UPZ6 1657 aa8.44□□□□□ -1.06
RGPD1-206ENST00000641458 FLT4P35916 1363 aa8.44□□□□□ -1.06
RGPD1-206ENST00000641458 BRINP3Q76B58 766 aa8.44□□□□□ -1.06
RGPD1-206ENST00000641458 SRPK2P78362 688 aaKnown RBP8.43□□□□□ -1.06
RGPD1-206ENST00000641458 HIRIP3Q9BW71 556 aaPredicted RBP8.43□□□□□ -1.06
RGPD1-206ENST00000641458 RREB1Q92766 1687 aa8.43□□□□□ -1.06
RGPD1-206ENST00000641458 GLI3P10071 1580 aa8.43□□□□□ -1.06
RGPD1-206ENST00000641458 RGPD3A6NKT7 1758 aaPredicted RBP8.42□□□□□ -1.06
RGPD1-206ENST00000641458 RGPD4Q7Z3J3 1758 aa8.42□□□□□ -1.06
RGPD1-206ENST00000641458 TRMT2AQ8IZ69 625 aaKnown RBP8.42□□□□□ -1.06
RGPD1-206ENST00000641458 KCNH5Q8NCM2 988 aa8.42□□□□□ -1.06
RGPD1-206ENST00000641458 SLIT2O94813 1529 aa8.42□□□□□ -1.06
RGPD1-206ENST00000641458 BCL9O00512 1426 aa8.42□□□□□ -1.06
RGPD1-206ENST00000641458 POLKQ9UBT6 870 aa8.42□□□□□ -1.06
RGPD1-206ENST00000641458 SLAIN2Q9P270 581 aa8.42□□□□□ -1.06
RGPD1-206ENST00000641458 PSME1Q06323 249 aa8.41□□□□□ -1.06
RGPD1-206ENST00000641458 IBTKQ9P2D0 1353 aaPredicted RBP8.41□□□□□ -1.06
RGPD1-206ENST00000641458 IGSF1Q8N6C5 1336 aa8.41□□□□□ -1.06
RGPD1-206ENST00000641458 PLEKHF1Q96S99 279 aa8.41□□□□□ -1.06
RGPD1-206ENST00000641458 DISP2A7MBM2 1401 aa8.41□□□□□ -1.06
RGPD1-206ENST00000641458 ZBED9Q6R2W3 1325 aa8.41□□□□□ -1.06
RGPD1-206ENST00000641458 IL13P35225 146 aa8.4□□□□□ -1.06
RGPD1-206ENST00000641458 ARHGEF25Q86VW2 580 aa8.4□□□□□ -1.06
RGPD1-206ENST00000641458 RNF123Q5XPI4 1314 aa8.39□□□□□ -1.07
RGPD1-206ENST00000641458 LAMB4A4D0S4 1761 aa8.39□□□□□ -1.07
RGPD1-206ENST00000641458 COL5A2P05997 1499 aaPredicted RBP8.39□□□□□ -1.07
RGPD1-206ENST00000641458 ATF3P18847 181 aa8.39□□□□□ -1.07
RGPD1-206ENST00000641458 IL16Q14005 1332 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms