RNA–Protein interactions for RNA: ENST00000641115.1

PHGDH-210, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,638 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-210ENST00000641115 TTC21BQ7Z4L5 1316 aa26.89■■□□□ 1.89
PHGDH-210ENST00000641115 MORC1Q86VD1 984 aa26.88■■□□□ 1.89
PHGDH-210ENST00000641115 BRD4O60885 1362 aaPredicted RBP26.88■■□□□ 1.89
PHGDH-210ENST00000641115 GGNBP2Q9H3C7 697 aa26.87■■□□□ 1.89
PHGDH-210ENST00000641115 TTC21AQ8NDW8 1320 aa26.87■■□□□ 1.89
PHGDH-210ENST00000641115 PSME1Q06323 249 aa26.86■■□□□ 1.89
PHGDH-210ENST00000641115 SLAIN2Q9P270 581 aa26.86■■□□□ 1.89
PHGDH-210ENST00000641115 NME9Q86XW9 330 aa26.84■■□□□ 1.89
PHGDH-210ENST00000641115 FOXO3O43524 673 aa26.83■■□□□ 1.89
PHGDH-210ENST00000641115 NLRP13Q86W25 1043 aa26.83■■□□□ 1.89
PHGDH-210ENST00000641115 PIK3C2AO00443 1686 aa26.83■■□□□ 1.89
PHGDH-210ENST00000641115 PPP2R1AP30153 589 aa26.81■■□□□ 1.88
PHGDH-210ENST00000641115 TRPM3Q9HCF6 1732 aaPredicted RBP26.8■■□□□ 1.88
PHGDH-210ENST00000641115 COG3Q96JB2 828 aa26.8■■□□□ 1.88
PHGDH-210ENST00000641115 MRS2Q9HD23 443 aa26.8■■□□□ 1.88
PHGDH-210ENST00000641115 NPHP3Q7Z494 1330 aa26.8■■□□□ 1.88
PHGDH-210ENST00000641115 PAK3O75914 559 aaPredicted RBP26.79■■□□□ 1.88
PHGDH-210ENST00000641115 BRINP3Q76B58 766 aa26.79■■□□□ 1.88
PHGDH-210ENST00000641115 USP54Q70EL1 1684 aa26.78■■□□□ 1.88
PHGDH-210ENST00000641115 TNNT2P45379 298 aaPredicted RBP26.78■■□□□ 1.88
PHGDH-210ENST00000641115 OVOS2A0A0J9YW53 1432 aa26.77■■□□□ 1.88
PHGDH-210ENST00000641115 OVOS2Q6IE36 1432 aa26.77■■□□□ 1.88
PHGDH-210ENST00000641115 KRT28Q7Z3Y7 464 aa26.76■■□□□ 1.87
PHGDH-210ENST00000641115 CCDC184Q52MB2 194 aa26.76■■□□□ 1.87
PHGDH-210ENST00000641115 XPCQ01831 940 aaPredicted RBP26.75■■□□□ 1.87
PHGDH-210ENST00000641115 ZRANB1Q9UGI0 708 aa26.75■■□□□ 1.87
PHGDH-210ENST00000641115 USP31Q70CQ4 1352 aa26.74■■□□□ 1.87
PHGDH-210ENST00000641115 IQSEC2Q5JU85 1478 aa26.74■■□□□ 1.87
PHGDH-210ENST00000641115 SCAF1Q9H7N4 1312 aaKnown RBP26.74■■□□□ 1.87
PHGDH-210ENST00000641115 ABTB2Q8N961 1025 aa26.74■■□□□ 1.87
PHGDH-210ENST00000641115 NHSL1Q5SYE7 1610 aa26.74■■□□□ 1.87
PHGDH-210ENST00000641115 MARF1Q9Y4F3 1742 aaKnown RBP26.73■■□□□ 1.87
PHGDH-210ENST00000641115 ROBO1Q9Y6N7 1651 aa26.73■■□□□ 1.87
PHGDH-210ENST00000641115 PXDNQ92626 1479 aa26.72■■□□□ 1.87
PHGDH-210ENST00000641115 ALS2Q96Q42 1657 aa26.72■■□□□ 1.87
PHGDH-210ENST00000641115 MAP2P11137 1827 aaKnown RBP26.71■■□□□ 1.87
PHGDH-210ENST00000641115 SBNO1A3KN83 1393 aa26.7■■□□□ 1.86
PHGDH-210ENST00000641115 NLRP6P59044 892 aa26.7■■□□□ 1.86
PHGDH-210ENST00000641115 DDX17Q92841 729 aaKnown RBP26.7■■□□□ 1.86
PHGDH-210ENST00000641115 AATKQ6ZMQ8 1374 aa26.68■■□□□ 1.86
PHGDH-210ENST00000641115 TOM1O60784 492 aa26.68■■□□□ 1.86
PHGDH-210ENST00000641115 NUTM2GQ5VZR2 741 aa26.67■■□□□ 1.86
PHGDH-210ENST00000641115 TNS3Q68CZ2 1445 aa26.66■■□□□ 1.86
PHGDH-210ENST00000641115 MTHFSP49914 203 aa26.66■■□□□ 1.86
PHGDH-210ENST00000641115 LMOD2Q6P5Q4 547 aa26.65■■□□□ 1.86
PHGDH-210ENST00000641115 CFAP53Q96M91 514 aa26.64■■□□□ 1.85
PHGDH-210ENST00000641115 SOS2Q07890 1332 aaPredicted RBP26.64■■□□□ 1.85
PHGDH-210ENST00000641115 CERKQ8TCT0 537 aa26.62■■□□□ 1.85
PHGDH-210ENST00000641115 SMG6Q86US8 1419 aaKnown RBP26.62■■□□□ 1.85
PHGDH-210ENST00000641115 AHDC1Q5TGY3 1603 aaPredicted RBP26.62■■□□□ 1.85
PHGDH-210ENST00000641115 ARHGEF10O15013 1369 aa26.61■■□□□ 1.85
PHGDH-210ENST00000641115 SPATA31A3Q5VYP0 1347 aa26.61■■□□□ 1.85
PHGDH-210ENST00000641115 FAM9BQ8IZU0 186 aa26.61■■□□□ 1.85
PHGDH-210ENST00000641115 PNISRQ8TF01 805 aaKnown RBP26.6■■□□□ 1.85
PHGDH-210ENST00000641115 POLKQ9UBT6 870 aa26.6■■□□□ 1.85
PHGDH-210ENST00000641115 SLIT3O75094 1523 aa26.59■■□□□ 1.85
PHGDH-210ENST00000641115 UBAP1LF5GYI3 381 aa26.59■■□□□ 1.85
PHGDH-210ENST00000641115 SOX12O15370 315 aa26.59■■□□□ 1.85
PHGDH-210ENST00000641115 FBLN1P23142 703 aa26.59■■□□□ 1.85
PHGDH-210ENST00000641115 CDK12Q9NYV4 1490 aaPredicted RBP26.59■■□□□ 1.85
PHGDH-210ENST00000641115 PPM1GO15355 546 aaPredicted RBP26.57■■□□□ 1.84
PHGDH-210ENST00000641115 RRS1Q15050 365 aaKnown RBP26.57■■□□□ 1.84
PHGDH-210ENST00000641115 KCNH5Q8NCM2 988 aa26.57■■□□□ 1.84
PHGDH-210ENST00000641115 USP19O94966 1318 aa26.57■■□□□ 1.84
PHGDH-210ENST00000641115 LTN1O94822 1766 aa26.57■■□□□ 1.84
PHGDH-210ENST00000641115 EMILIN1Q9Y6C2 1016 aa26.57■■□□□ 1.84
PHGDH-210ENST00000641115 SHPRHQ149N8 1683 aa26.57■■□□□ 1.84
PHGDH-210ENST00000641115 PHRF1Q9P1Y6 1649 aaKnown RBP26.56■■□□□ 1.84
PHGDH-210ENST00000641115 MED1Q15648 1581 aaPredicted RBP26.56■■□□□ 1.84
PHGDH-210ENST00000641115 NFAT5O94916 1531 aa26.56■■□□□ 1.84
PHGDH-210ENST00000641115 PHLPP1O60346 1717 aa26.56■■□□□ 1.84
PHGDH-210ENST00000641115 WDR43Q15061 677 aaKnown RBP eCLIP26.55■■□□□ 1.84
PHGDH-210ENST00000641115 YTHDC1Q96MU7 727 aaKnown RBP26.55■■□□□ 1.84
PHGDH-210ENST00000641115 PIP4K2BP78356 416 aa26.54■■□□□ 1.84
PHGDH-210ENST00000641115 CRYBG1Q9Y4K1 1723 aa26.54■■□□□ 1.84
PHGDH-210ENST00000641115 PNPLA6Q8IY17 1366 aa26.54■■□□□ 1.84
PHGDH-210ENST00000641115 COL3A1P02461 1466 aaPredicted RBP26.54■■□□□ 1.84
PHGDH-210ENST00000641115 PEAK1Q9H792 1746 aa26.53■■□□□ 1.84
PHGDH-210ENST00000641115 INSRP06213 1382 aa26.52■■□□□ 1.84
PHGDH-210ENST00000641115 MAP3K19Q56UN5 1328 aa26.52■■□□□ 1.84
PHGDH-210ENST00000641115 PLEKHG5O94827 1062 aa26.5■■□□□ 1.83
PHGDH-210ENST00000641115 GCP02774 474 aa26.5■■□□□ 1.83
PHGDH-210ENST00000641115 KIF24Q5T7B8 1368 aa26.5■■□□□ 1.83
PHGDH-210ENST00000641115 FLT4P35916 1363 aa26.49■■□□□ 1.83
PHGDH-210ENST00000641115 COL16A1Q07092 1604 aaPredicted RBP26.48■■□□□ 1.83
PHGDH-210ENST00000641115 AMPHP49418 695 aa26.48■■□□□ 1.83
PHGDH-210ENST00000641115 LRRC59Q96AG4 307 aaKnown RBP26.48■■□□□ 1.83
PHGDH-210ENST00000641115 ABCA3Q99758 1704 aa26.48■■□□□ 1.83
PHGDH-210ENST00000641115 RTL1A6NKG5 1358 aa26.48■■□□□ 1.83
PHGDH-210ENST00000641115 DIAPH1O60610 1272 aaKnown RBP26.47■■□□□ 1.83
PHGDH-210ENST00000641115 NUDCQ9Y266 331 aa26.47■■□□□ 1.83
PHGDH-210ENST00000641115 ADAMTS8Q9UP79 889 aa26.45■■□□□ 1.82
PHGDH-210ENST00000641115 COL22A1Q8NFW1 1626 aaPredicted RBP26.43■■□□□ 1.82
PHGDH-210ENST00000641115 CABLES1Q8TDN4 633 aa26.43■■□□□ 1.82
PHGDH-210ENST00000641115 BLMP54132 1417 aaPredicted RBP26.42■■□□□ 1.82
PHGDH-210ENST00000641115 ZBTB7CA1YPR0 619 aa26.41■■□□□ 1.82
PHGDH-210ENST00000641115 HOXC9P31274 260 aa26.41■■□□□ 1.82
PHGDH-210ENST00000641115 HAP1P54257 671 aaPredicted RBP26.41■■□□□ 1.82
PHGDH-210ENST00000641115 HSP90AB2PQ58FF8 381 aa26.41■■□□□ 1.82
PHGDH-210ENST00000641115 ARHGEF25Q86VW2 580 aa26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms