RNA–Protein interactions for RNA: ENST00000640657.1

HNRNPU-230, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 4,323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-230ENST00000640657 AEBP1Q8IUX7 1158 aa6.05□□□□□ -1.44
HNRNPU-230ENST00000640657 STK31Q9BXU1 1019 aa6.05□□□□□ -1.44
HNRNPU-230ENST00000640657 IFT57Q9NWB7 429 aa6.05□□□□□ -1.44
HNRNPU-230ENST00000640657 COL17A1Q9UMD9 1497 aaPredicted RBP6.05□□□□□ -1.44
HNRNPU-230ENST00000640657 KIAA0586Q9BVV6 1533 aa6.05□□□□□ -1.44
HNRNPU-230ENST00000640657 POLR3AO14802 1390 aaPredicted RBP6.05□□□□□ -1.44
HNRNPU-230ENST00000640657 SSFA2P28290 1259 aa6.05□□□□□ -1.44
HNRNPU-230ENST00000640657 OS9Q13438 667 aaPredicted RBP6.05□□□□□ -1.44
HNRNPU-230ENST00000640657 CCDC183Q5T5S1 534 aa6.05□□□□□ -1.44
HNRNPU-230ENST00000640657 CREBRFQ8IUR6 639 aa6.05□□□□□ -1.44
HNRNPU-230ENST00000640657 RPAP2Q8IXW5 612 aaPredicted RBP6.05□□□□□ -1.44
HNRNPU-230ENST00000640657 RNF214Q8ND24 703 aa6.05□□□□□ -1.44
HNRNPU-230ENST00000640657 ADGRL2O95490 1459 aa6.05□□□□□ -1.44
HNRNPU-230ENST00000640657 PZPP20742 1482 aa6.05□□□□□ -1.44
HNRNPU-230ENST00000640657 SCAF11Q99590 1463 aaKnown RBP6.05□□□□□ -1.44
HNRNPU-230ENST00000640657 NSD2O96028 1365 aa6.05□□□□□ -1.44
HNRNPU-230ENST00000640657 BECN2A8MW95 431 aa6.05□□□□□ -1.44
HNRNPU-230ENST00000640657 PDCP20941 246 aa6.05□□□□□ -1.44
HNRNPU-230ENST00000640657 MTHFSP49914 203 aa6.05□□□□□ -1.44
HNRNPU-230ENST00000640657 NUCB1Q02818 461 aa6.05□□□□□ -1.44
HNRNPU-230ENST00000640657 RTF1Q92541 710 aaKnown RBP6.05□□□□□ -1.44
HNRNPU-230ENST00000640657 ANTXR1Q9H6X2 564 aa6.05□□□□□ -1.44
HNRNPU-230ENST00000640657 CDK13Q14004 1512 aaKnown RBP6.05□□□□□ -1.44
HNRNPU-230ENST00000640657 DNMT1P26358 1616 aaKnown RBP6.04□□□□□ -1.44
HNRNPU-230ENST00000640657 NEMFO60524 1076 aa6.04□□□□□ -1.44
HNRNPU-230ENST00000640657 FGD1P98174 961 aa6.04□□□□□ -1.44
HNRNPU-230ENST00000640657 SHANK2Q9UPX8 1470 aa6.04□□□□□ -1.44
HNRNPU-230ENST00000640657 TPRNQ4KMQ1 711 aa6.04□□□□□ -1.44
HNRNPU-230ENST00000640657 AMER1Q5JTC6 1135 aaPredicted RBP6.04□□□□□ -1.44
HNRNPU-230ENST00000640657 TPM1P09493 284 aa6.04□□□□□ -1.44
HNRNPU-230ENST00000640657 TPD52L1Q16890 204 aaPredicted RBP6.04□□□□□ -1.44
HNRNPU-230ENST00000640657 FOXD4L5Q5VV16 416 aaPredicted RBP6.04□□□□□ -1.44
HNRNPU-230ENST00000640657 TRMT2AQ8IZ69 625 aaKnown RBP6.04□□□□□ -1.44
HNRNPU-230ENST00000640657 FOXD4L4Q8WXT5 416 aaPredicted RBP6.04□□□□□ -1.44
HNRNPU-230ENST00000640657 ARHGAP45Q92619 1136 aa6.04□□□□□ -1.44
HNRNPU-230ENST00000640657 PAXBP1Q9Y5B6 917 aa6.04□□□□□ -1.44
HNRNPU-230ENST00000640657 PRG4Q92954 1404 aaPredicted RBP6.03□□□□□ -1.44
HNRNPU-230ENST00000640657 ZBTB7CA1YPR0 619 aa6.03□□□□□ -1.44
HNRNPU-230ENST00000640657 VGFO15240 615 aaPredicted RBP6.03□□□□□ -1.44
HNRNPU-230ENST00000640657 NEK4P51957 841 aa6.03□□□□□ -1.44
HNRNPU-230ENST00000640657 SRCIN1Q9C0H9 1055 aa6.03□□□□□ -1.44
HNRNPU-230ENST00000640657 PCDHB15Q9Y5E8 787 aa6.03□□□□□ -1.44
HNRNPU-230ENST00000640657 POLR1AO95602 1720 aaPredicted RBP6.03□□□□□ -1.44
HNRNPU-230ENST00000640657 DISP3Q9P2K9 1392 aa6.03□□□□□ -1.44
HNRNPU-230ENST00000640657 SYCE3A1L190 88 aa6.03□□□□□ -1.44
HNRNPU-230ENST00000640657 CAVIN2O95810 425 aa6.03□□□□□ -1.44
HNRNPU-230ENST00000640657 FAM193AP78312 1265 aa6.03□□□□□ -1.44
HNRNPU-230ENST00000640657 NAT10Q9H0A0 1025 aaKnown RBP6.03□□□□□ -1.44
HNRNPU-230ENST00000640657 ACBD3Q9H3P7 528 aa6.03□□□□□ -1.44
HNRNPU-230ENST00000640657 ITSN2Q9NZM3 1697 aa6.03□□□□□ -1.44
HNRNPU-230ENST00000640657 ZKSCAN1P17029 563 aaPredicted RBP6.03□□□□□ -1.44
HNRNPU-230ENST00000640657 SETQ01105 290 aaPredicted RBP6.03□□□□□ -1.44
HNRNPU-230ENST00000640657 HSP90AB4PQ58FF6 505 aa6.03□□□□□ -1.44
HNRNPU-230ENST00000640657 MYRIPQ8NFW9 859 aa6.03□□□□□ -1.44
HNRNPU-230ENST00000640657 CCDC34Q96HJ3 373 aa6.03□□□□□ -1.44
HNRNPU-230ENST00000640657 APBB1O00213 710 aa6.03□□□□□ -1.44
HNRNPU-230ENST00000640657 SEC24BO95487 1268 aa6.03□□□□□ -1.44
HNRNPU-230ENST00000640657 NOLC1Q14978 699 aaKnown RBP eCLIP6.03□□□□□ -1.44
HNRNPU-230ENST00000640657 PPP4R3BQ5MIZ7 849 aa6.03□□□□□ -1.44
HNRNPU-230ENST00000640657 ZSCAN31Q96LW9 406 aaPredicted RBP6.03□□□□□ -1.44
HNRNPU-230ENST00000640657 TUBB4AP04350 444 aa6.02□□□□□ -1.45
HNRNPU-230ENST00000640657 AK7Q96M32 723 aa6.02□□□□□ -1.45
HNRNPU-230ENST00000640657 TESK2Q96S53 571 aa6.02□□□□□ -1.45
HNRNPU-230ENST00000640657 PTPRGP23470 1445 aa6.02□□□□□ -1.45
HNRNPU-230ENST00000640657 KDM5CP41229 1560 aa6.02□□□□□ -1.45
HNRNPU-230ENST00000640657 CBX1P83916 185 aa6.02□□□□□ -1.45
HNRNPU-230ENST00000640657 TMEM57Q8N5G2 664 aa6.02□□□□□ -1.45
HNRNPU-230ENST00000640657 ANO2Q9NQ90 1003 aa6.02□□□□□ -1.45
HNRNPU-230ENST00000640657 OGFRQ9NZT2 677 aa6.02□□□□□ -1.45
HNRNPU-230ENST00000640657 GABPB1Q06547 395 aaPredicted RBP6.02□□□□□ -1.45
HNRNPU-230ENST00000640657 ZNF592Q92610 1267 aa6.02□□□□□ -1.45
HNRNPU-230ENST00000640657 RILPL2Q969X0 211 aa6.02□□□□□ -1.45
HNRNPU-230ENST00000640657 PUS7Q96PZ0 661 aaKnown RBP6.02□□□□□ -1.45
HNRNPU-230ENST00000640657 TRAK1Q9UPV9 953 aa6.02□□□□□ -1.45
HNRNPU-230ENST00000640657 SYNJ2O15056 1496 aa6.02□□□□□ -1.45
HNRNPU-230ENST00000640657 ARHGEF11O15085 1522 aa6.02□□□□□ -1.45
HNRNPU-230ENST00000640657 SAMD9Q5K651 1589 aa6.01□□□□□ -1.45
HNRNPU-230ENST00000640657 ATAD2Q6PL18 1390 aa6.01□□□□□ -1.45
HNRNPU-230ENST00000640657 MNS1Q8NEH6 495 aa6.01□□□□□ -1.45
HNRNPU-230ENST00000640657 DNAJC2Q99543 621 aaKnown RBP6.01□□□□□ -1.45
HNRNPU-230ENST00000640657 TRIM5Q9C035 493 aa6.01□□□□□ -1.45
HNRNPU-230ENST00000640657 ABCC2Q92887 1545 aa6.01□□□□□ -1.45
HNRNPU-230ENST00000640657 RPGRIP1LQ68CZ1 1315 aa6.01□□□□□ -1.45
HNRNPU-230ENST00000640657 ZNF521Q96K83 1311 aa6.01□□□□□ -1.45
HNRNPU-230ENST00000640657 FCHSD2O94868 740 aa6.01□□□□□ -1.45
HNRNPU-230ENST00000640657 PSMA5P28066 241 aa6.01□□□□□ -1.45
HNRNPU-230ENST00000640657 TBC1D9Q6ZT07 1266 aa6.01□□□□□ -1.45
HNRNPU-230ENST00000640657 GPATCH8Q9UKJ3 1502 aaKnown RBP6.01□□□□□ -1.45
HNRNPU-230ENST00000640657 KIF3BO15066 747 aa6.01□□□□□ -1.45
HNRNPU-230ENST00000640657 GNAI3P08754 354 aa6.01□□□□□ -1.45
HNRNPU-230ENST00000640657 TMPOP42166 694 aaKnown RBP6.01□□□□□ -1.45
HNRNPU-230ENST00000640657 HDGFP51858 240 aaKnown RBP6.01□□□□□ -1.45
HNRNPU-230ENST00000640657 TIGD1Q96MW7 591 aa6.01□□□□□ -1.45
HNRNPU-230ENST00000640657 MBD5Q9P267 1494 aa6.01□□□□□ -1.45
HNRNPU-230ENST00000640657 ANAPC15P60006 121 aa6.01□□□□□ -1.45
HNRNPU-230ENST00000640657 SSH1Q8WYL5 1049 aa6.01□□□□□ -1.45
HNRNPU-230ENST00000640657 TRIM27P14373 513 aa6□□□□□ -1.45
HNRNPU-230ENST00000640657 NOL8Q76FK4 1167 aaKnown RBP6□□□□□ -1.45
HNRNPU-230ENST00000640657 KDM5BQ9UGL1 1544 aa6□□□□□ -1.45
HNRNPU-230ENST00000640657 H3BQV1 296 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms