RNA–Protein interactions for RNA: ENST00000639953.1

ATM-229, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-229ENST00000639953 GMPR2Q9P2T1 348 aaKnown RBP10.39□□□□□ -0.75
ATM-229ENST00000639953 SMCPP49901 116 aaPredicted RBP10.38□□□□□ -0.75
ATM-229ENST00000639953 WNT7BP56706 349 aa10.38□□□□□ -0.75
ATM-229ENST00000639953 MTMR2Q13614 643 aa10.38□□□□□ -0.75
ATM-229ENST00000639953 CTC1Q2NKJ3 1217 aa10.38□□□□□ -0.75
ATM-229ENST00000639953 RSBN1LQ6PCB5 846 aaPredicted RBP10.38□□□□□ -0.75
ATM-229ENST00000639953 EVA1BQ9NVM1 165 aa10.38□□□□□ -0.75
ATM-229ENST00000639953 CEP164Q9UPV0 1460 aa10.37□□□□□ -0.75
ATM-229ENST00000639953 CCNYL3P0C7X3 344 aa10.37□□□□□ -0.75
ATM-229ENST00000639953 PDE4DQ08499 809 aa10.37□□□□□ -0.75
ATM-229ENST00000639953 SH3BP2P78314 561 aa10.36□□□□□ -0.75
ATM-229ENST00000639953 SIAH2O43255 324 aa10.35□□□□□ -0.75
ATM-229ENST00000639953 PTPRNQ16849 979 aa10.35□□□□□ -0.75
ATM-229ENST00000639953 RIC3Q7Z5B4 369 aa10.35□□□□□ -0.75
ATM-229ENST00000639953 BAP1Q92560 729 aa10.35□□□□□ -0.75
ATM-229ENST00000639953 SPTLC1O15269 473 aa10.34□□□□□ -0.75
ATM-229ENST00000639953 ALDH1A1P00352 501 aa10.34□□□□□ -0.75
ATM-229ENST00000639953 HRCP23327 699 aa10.34□□□□□ -0.75
ATM-229ENST00000639953 KCNH2Q12809 1159 aa10.34□□□□□ -0.75
ATM-229ENST00000639953 CSPP1Q1MSJ5 1256 aa10.34□□□□□ -0.75
ATM-229ENST00000639953 LINC01559Q495D7 138 aa10.34□□□□□ -0.75
ATM-229ENST00000639953 UNC93B1Q9H1C4 597 aa10.34□□□□□ -0.75
ATM-229ENST00000639953 CUX2O14529 1486 aa10.34□□□□□ -0.75
ATM-229ENST00000639953 MRC2Q9UBG0 1479 aa10.34□□□□□ -0.75
ATM-229ENST00000639953 SPDYE5A6NIY4 337 aa10.33□□□□□ -0.76
ATM-229ENST00000639953 C11orf95C9JLR9 678 aaPredicted RBP10.33□□□□□ -0.76
ATM-229ENST00000639953 CFAP99D6REC4 459 aa10.33□□□□□ -0.76
ATM-229ENST00000639953 DIXDC1Q155Q3 683 aa10.33□□□□□ -0.76
ATM-229ENST00000639953 EHBP1Q8NDI1 1231 aa10.33□□□□□ -0.76
ATM-229ENST00000639953 CABLES1Q8TDN4 633 aa10.33□□□□□ -0.76
ATM-229ENST00000639953 GJA5P36382 358 aa10.32□□□□□ -0.76
ATM-229ENST00000639953 URB2Q14146 1524 aaKnown RBP10.32□□□□□ -0.76
ATM-229ENST00000639953 DESI1Q6ICB0 168 aa10.31□□□□□ -0.76
ATM-229ENST00000639953 LYPD8Q6UX82 237 aa10.31□□□□□ -0.76
ATM-229ENST00000639953 ATP13A2Q9NQ11 1180 aa10.31□□□□□ -0.76
ATM-229ENST00000639953 LIMD1Q9UGP4 676 aa10.31□□□□□ -0.76
ATM-229ENST00000639953 WDR62O43379 1518 aa10.31□□□□□ -0.76
ATM-229ENST00000639953 CTHP32929 405 aa10.29□□□□□ -0.76
ATM-229ENST00000639953 MYSM1Q5VVJ2 828 aa10.29□□□□□ -0.76
ATM-229ENST00000639953 ZBTB3Q9H5J0 574 aa10.28□□□□□ -0.76
ATM-229ENST00000639953 PER1O15534 1290 aaPredicted RBP10.27□□□□□ -0.77
ATM-229ENST00000639953 SNRPBP14678 240 aaKnown RBP10.27□□□□□ -0.77
ATM-229ENST00000639953 QPCTQ16769 361 aa10.26□□□□□ -0.77
ATM-229ENST00000639953 ZNF511Q8NB15 262 aa10.26□□□□□ -0.77
ATM-229ENST00000639953 NUTM2BA6NNL0 878 aaPredicted RBP10.25□□□□□ -0.77
ATM-229ENST00000639953 NUTM2EB1AL46 878 aaPredicted RBP10.25□□□□□ -0.77
ATM-229ENST00000639953 NUTM2DQ5VT03 806 aaPredicted RBP10.25□□□□□ -0.77
ATM-229ENST00000639953 PRPF38BQ5VTL8 546 aaKnown RBP10.25□□□□□ -0.77
ATM-229ENST00000639953 TREML4Q6UXN2 200 aa10.25□□□□□ -0.77
ATM-229ENST00000639953 NUTM2AQ8IVF1 878 aaPredicted RBP10.25□□□□□ -0.77
ATM-229ENST00000639953 TSC1Q92574 1164 aa10.25□□□□□ -0.77
ATM-229ENST00000639953 MAP10Q9P2G4 905 aa10.25□□□□□ -0.77
ATM-229ENST00000639953 TLL2Q9Y6L7 1015 aa10.25□□□□□ -0.77
ATM-229ENST00000639953 WASF2Q9Y6W5 498 aa10.25□□□□□ -0.77
ATM-229ENST00000639953 TOPBP1Q92547 1522 aa10.24□□□□□ -0.77
ATM-229ENST00000639953 LCE2AQ5TA79 106 aaPredicted RBP10.24□□□□□ -0.77
ATM-229ENST00000639953 LILRB3O75022 631 aa10.23□□□□□ -0.77
ATM-229ENST00000639953 RTL5Q5HYW3 569 aaPredicted RBP10.23□□□□□ -0.77
ATM-229ENST00000639953 FOXJ1Q92949 421 aa10.23□□□□□ -0.77
ATM-229ENST00000639953 POLR3EQ9NVU0 708 aa10.23□□□□□ -0.77
ATM-229ENST00000639953 F12P00748 615 aaPredicted RBP10.22□□□□□ -0.77
ATM-229ENST00000639953 DNMBPQ6XZF7 1577 aa10.22□□□□□ -0.77
ATM-229ENST00000639953 VARSP26640 1264 aaKnown RBP10.21□□□□□ -0.77
ATM-229ENST00000639953 CAPN5O15484 640 aaPredicted RBP10.2□□□□□ -0.78
ATM-229ENST00000639953 CUX1P39880 1505 aa10.2□□□□□ -0.78
ATM-229ENST00000639953 TRIM47Q96LD4 638 aa10.2□□□□□ -0.78
ATM-229ENST00000639953 BMP1P13497 986 aa10.19□□□□□ -0.78
ATM-229ENST00000639953 TUSC1Q2TAM9 212 aa10.19□□□□□ -0.78
ATM-229ENST00000639953 TRIM46Q7Z4K8 759 aa10.19□□□□□ -0.78
ATM-229ENST00000639953 ABCC8Q09428 1581 aa10.18□□□□□ -0.78
ATM-229ENST00000639953 NFX1Q12986 1120 aaKnown RBP10.18□□□□□ -0.78
ATM-229ENST00000639953 SENP2Q9HC62 589 aa10.18□□□□□ -0.78
ATM-229ENST00000639953 WFS1O76024 890 aa10.17□□□□□ -0.78
ATM-229ENST00000639953 CLK2P49760 499 aaKnown RBP10.17□□□□□ -0.78
ATM-229ENST00000639953 C4orf48Q5BLP8 95 aa10.17□□□□□ -0.78
ATM-229ENST00000639953 PLEKHG3A1L390 1219 aa10.16□□□□□ -0.78
ATM-229ENST00000639953 NNTQ13423 1086 aa10.16□□□□□ -0.78
ATM-229ENST00000639953 ARID5BQ14865 1188 aa10.16□□□□□ -0.78
ATM-229ENST00000639953 GPBP1L1Q9HC44 474 aaPredicted RBP10.16□□□□□ -0.78
ATM-229ENST00000639953 FBXO31Q5XUX0 539 aaPredicted RBP10.15□□□□□ -0.78
ATM-229ENST00000639953 MPNDQ8N594 471 aa10.15□□□□□ -0.78
ATM-229ENST00000639953 POLA1P09884 1462 aaPredicted RBP10.15□□□□□ -0.78
ATM-229ENST00000639953 ZNF608Q9ULD9 1512 aaPredicted RBP10.14□□□□□ -0.79
ATM-229ENST00000639953 AGERQ15109 404 aa10.14□□□□□ -0.79
ATM-229ENST00000639953 FAM174AQ8TBP5 190 aa10.14□□□□□ -0.79
ATM-229ENST00000639953 KIFC2Q96AC6 838 aa10.14□□□□□ -0.79
ATM-229ENST00000639953 RSPH6AQ9H0K4 717 aa10.14□□□□□ -0.79
ATM-229ENST00000639953 FGD5Q6ZNL6 1462 aa10.14□□□□□ -0.79
ATM-229ENST00000639953 IFT140Q96RY7 1462 aa10.14□□□□□ -0.79
ATM-229ENST00000639953 RAD54L2Q9Y4B4 1467 aa10.14□□□□□ -0.79
ATM-229ENST00000639953 TARBP1Q13395 1621 aaKnown RBP10.14□□□□□ -0.79
ATM-229ENST00000639953 CTDSPL2Q05D32 466 aa10.13□□□□□ -0.79
ATM-229ENST00000639953 LCE2CQ5TA81 110 aa10.13□□□□□ -0.79
ATM-229ENST00000639953 SYNJ1O43426 1573 aa10.13□□□□□ -0.79
ATM-229ENST00000639953 TERTO14746 1132 aaKnown RBP10.12□□□□□ -0.79
ATM-229ENST00000639953 PROCA1Q8NCQ7 364 aaPredicted RBP10.12□□□□□ -0.79
ATM-229ENST00000639953 CDK15Q96Q40 435 aa10.12□□□□□ -0.79
ATM-229ENST00000639953 FAM117AQ9C073 453 aa10.12□□□□□ -0.79
ATM-229ENST00000639953 WRNQ14191 1432 aaPredicted RBP eCLIP10.11□□□□□ -0.79
ATM-229ENST00000639953 ZFP42Q96MM3 310 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms