RNA–Protein interactions for RNA: ENST00000639715.1

SCARB2-218, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-218ENST00000639715 DZIP1LQ8IYY4 767 aaKnown RBP6.96□□□□□ -1.3
SCARB2-218ENST00000639715 TIGD1Q96MW7 591 aa6.96□□□□□ -1.3
SCARB2-218ENST00000639715 TRIM34Q9BYJ4 488 aa6.96□□□□□ -1.3
SCARB2-218ENST00000639715 DISP1Q96F81 1524 aa6.96□□□□□ -1.3
SCARB2-218ENST00000639715 PDCL2Q8N4E4 241 aa6.96□□□□□ -1.3
SCARB2-218ENST00000639715 CFAP74Q9C0B2 1584 aa6.95□□□□□ -1.3
SCARB2-218ENST00000639715 ERICH4A6NGS2 130 aa6.95□□□□□ -1.3
SCARB2-218ENST00000639715 GOLGA6L6A8MZA4 724 aa6.95□□□□□ -1.3
SCARB2-218ENST00000639715 TERF1P54274 439 aa6.95□□□□□ -1.3
SCARB2-218ENST00000639715 MADDQ8WXG6 1647 aa6.95□□□□□ -1.3
SCARB2-218ENST00000639715 DIAPH1O60610 1272 aaKnown RBP6.95□□□□□ -1.3
SCARB2-218ENST00000639715 SLFN5Q08AF3 891 aa6.95□□□□□ -1.3
SCARB2-218ENST00000639715 TCP11L2Q8N4U5 519 aa6.95□□□□□ -1.3
SCARB2-218ENST00000639715 KIF3AQ9Y496 699 aa6.95□□□□□ -1.3
SCARB2-218ENST00000639715 COL17A1Q9UMD9 1497 aaPredicted RBP6.95□□□□□ -1.3
SCARB2-218ENST00000639715 DHX29Q7Z478 1369 aaKnown RBP6.95□□□□□ -1.3
SCARB2-218ENST00000639715 ZBTB22O15209 634 aa6.95□□□□□ -1.3
SCARB2-218ENST00000639715 CT47B1P0C2W7 299 aaPredicted RBP6.95□□□□□ -1.3
SCARB2-218ENST00000639715 WDR63Q8IWG1 891 aa6.95□□□□□ -1.3
SCARB2-218ENST00000639715 RTF1Q92541 710 aaKnown RBP6.95□□□□□ -1.3
SCARB2-218ENST00000639715 MFAP1P55081 439 aaKnown RBP6.94□□□□□ -1.3
SCARB2-218ENST00000639715 ZNF142P52746 1687 aaPredicted RBP6.94□□□□□ -1.3
SCARB2-218ENST00000639715 PARD3Q8TEW0 1356 aa6.94□□□□□ -1.3
SCARB2-218ENST00000639715 MTHFSP49914 203 aa6.94□□□□□ -1.3
SCARB2-218ENST00000639715 RIPK4P57078 832 aa6.94□□□□□ -1.3
SCARB2-218ENST00000639715 NUTM2DQ5VT03 806 aaPredicted RBP6.94□□□□□ -1.3
SCARB2-218ENST00000639715 TSPYL1Q9H0U9 437 aa6.94□□□□□ -1.3
SCARB2-218ENST00000639715 PRAG1Q86YV5 1406 aa6.94□□□□□ -1.3
SCARB2-218ENST00000639715 KIF16BQ96L93 1317 aa6.94□□□□□ -1.3
SCARB2-218ENST00000639715 MCCP23508 829 aa6.94□□□□□ -1.3
SCARB2-218ENST00000639715 BCL2L13Q9BXK5 485 aa6.94□□□□□ -1.3
SCARB2-218ENST00000639715 SCAF11Q99590 1463 aaKnown RBP6.94□□□□□ -1.3
SCARB2-218ENST00000639715 HMMRO75330 724 aa6.93□□□□□ -1.3
SCARB2-218ENST00000639715 HSP90B1P14625 803 aaKnown RBP6.93□□□□□ -1.3
SCARB2-218ENST00000639715 CALCOCO1Q9P1Z2 691 aa6.93□□□□□ -1.3
SCARB2-218ENST00000639715 SPATA31E1Q6ZUB1 1445 aa6.93□□□□□ -1.3
SCARB2-218ENST00000639715 PLPPR3Q6T4P5 718 aa6.93□□□□□ -1.3
SCARB2-218ENST00000639715 FOXD4L1Q9NU39 408 aa6.93□□□□□ -1.3
SCARB2-218ENST00000639715 DUOX2Q9NRD8 1548 aa6.93□□□□□ -1.3
SCARB2-218ENST00000639715 MLECQ14165 292 aa6.93□□□□□ -1.3
SCARB2-218ENST00000639715 FAM135AQ9P2D6 1515 aa6.93□□□□□ -1.3
SCARB2-218ENST00000639715 FRMPD1Q5SYB0 1578 aa6.93□□□□□ -1.3
SCARB2-218ENST00000639715 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.92□□□□□ -1.3
SCARB2-218ENST00000639715 GPATCH11Q8N954 259 aa6.92□□□□□ -1.3
SCARB2-218ENST00000639715 PANK1Q8TE04 598 aa6.92□□□□□ -1.3
SCARB2-218ENST00000639715 CCDC39Q9UFE4 941 aa6.92□□□□□ -1.3
SCARB2-218ENST00000639715 ZCCHC11Q5TAX3 1644 aaKnown RBP6.92□□□□□ -1.3
SCARB2-218ENST00000639715 SLC52A1Q9NWF4 448 aa6.92□□□□□ -1.3
SCARB2-218ENST00000639715 MINK1Q8N4C8 1332 aaPredicted RBP6.92□□□□□ -1.3
SCARB2-218ENST00000639715 MROH2AA6NES4 1674 aa6.92□□□□□ -1.3
SCARB2-218ENST00000639715 TMEM132EQ6IEE7 984 aa6.92□□□□□ -1.3
SCARB2-218ENST00000639715 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.92□□□□□ -1.3
SCARB2-218ENST00000639715 GOLGA6L1Q8N7Z2 621 aa6.92□□□□□ -1.3
SCARB2-218ENST00000639715 API5Q9BZZ5 524 aaKnown RBP6.92□□□□□ -1.3
SCARB2-218ENST00000639715 SLC12A5Q9H2X9 1139 aa6.92□□□□□ -1.3
SCARB2-218ENST00000639715 INSRP06213 1382 aa6.92□□□□□ -1.3
SCARB2-218ENST00000639715 ABCA9Q8IUA7 1624 aa6.91□□□□□ -1.3
SCARB2-218ENST00000639715 EIF2AK4Q9P2K8 1649 aaKnown RBP6.91□□□□□ -1.3
SCARB2-218ENST00000639715 ERBB4Q15303 1308 aa6.91□□□□□ -1.3
SCARB2-218ENST00000639715 LRPPRCP42704 1394 aaKnown RBP6.91□□□□□ -1.3
SCARB2-218ENST00000639715 PLCH2O75038 1416 aa6.91□□□□□ -1.3
SCARB2-218ENST00000639715 RNF123Q5XPI4 1314 aa6.91□□□□□ -1.3
SCARB2-218ENST00000639715 GTF2A1P52655 376 aaPredicted RBP6.91□□□□□ -1.3
SCARB2-218ENST00000639715 AXDND1Q5T1B0 1012 aaPredicted RBP6.91□□□□□ -1.3
SCARB2-218ENST00000639715 ZBTB9Q96C00 473 aa6.91□□□□□ -1.3
SCARB2-218ENST00000639715 COG3Q96JB2 828 aa6.91□□□□□ -1.3
SCARB2-218ENST00000639715 BCAR3O75815 825 aa6.91□□□□□ -1.3
SCARB2-218ENST00000639715 GNAI1P63096 354 aa6.91□□□□□ -1.3
SCARB2-218ENST00000639715 TPRNQ4KMQ1 711 aa6.91□□□□□ -1.3
SCARB2-218ENST00000639715 STK31Q9BXU1 1019 aa6.91□□□□□ -1.3
SCARB2-218ENST00000639715 DIAPH3Q9NSV4 1193 aa6.91□□□□□ -1.3
SCARB2-218ENST00000639715 ZSCAN20P17040 1043 aaPredicted RBP6.9□□□□□ -1.3
SCARB2-218ENST00000639715 DUSP27Q5VZP5 1158 aa6.9□□□□□ -1.3
SCARB2-218ENST00000639715 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.9□□□□□ -1.3
SCARB2-218ENST00000639715 TESK2Q96S53 571 aa6.9□□□□□ -1.3
SCARB2-218ENST00000639715 NKTRP30414 1462 aaKnown RBP6.9□□□□□ -1.3
SCARB2-218ENST00000639715 FSD2A1L4K1 749 aa6.9□□□□□ -1.31
SCARB2-218ENST00000639715 NEO1Q92859 1461 aa6.9□□□□□ -1.31
SCARB2-218ENST00000639715 PER1O15534 1290 aaPredicted RBP6.9□□□□□ -1.31
SCARB2-218ENST00000639715 TNNT1P13805 278 aa6.9□□□□□ -1.31
SCARB2-218ENST00000639715 ANKRD45Q5TZF3 282 aa6.9□□□□□ -1.31
SCARB2-218ENST00000639715 MPNDQ8N594 471 aa6.9□□□□□ -1.31
SCARB2-218ENST00000639715 CABP2Q9NPB3 220 aa6.9□□□□□ -1.31
SCARB2-218ENST00000639715 RIMS1Q86UR5 1692 aaKnown RBP6.89□□□□□ -1.31
SCARB2-218ENST00000639715 ADGBQ8N7X0 1667 aa6.89□□□□□ -1.31
SCARB2-218ENST00000639715 BANK1Q8NDB2 785 aa6.89□□□□□ -1.31
SCARB2-218ENST00000639715 RGS22Q8NE09 1264 aa6.89□□□□□ -1.31
SCARB2-218ENST00000639715 GGNBP2Q9H3C7 697 aa6.89□□□□□ -1.31
SCARB2-218ENST00000639715 ZNF428Q96B54 188 aa6.89□□□□□ -1.31
SCARB2-218ENST00000639715 RICTORQ6R327 1708 aa6.89□□□□□ -1.31
SCARB2-218ENST00000639715 MAGI2Q86UL8 1455 aa6.89□□□□□ -1.31
SCARB2-218ENST00000639715 ZNF526Q8TF50 670 aaPredicted RBP6.89□□□□□ -1.31
SCARB2-218ENST00000639715 C22orf23Q9BZE7 217 aa6.89□□□□□ -1.31
SCARB2-218ENST00000639715 SYCP2Q9BX26 1530 aa6.89□□□□□ -1.31
SCARB2-218ENST00000639715 ZNF622Q969S3 477 aaKnown RBP eCLIP6.88□□□□□ -1.31
SCARB2-218ENST00000639715 PDZRN3Q9UPQ7 1066 aa6.88□□□□□ -1.31
SCARB2-218ENST00000639715 GPRASP1Q5JY77 1395 aa6.88□□□□□ -1.31
SCARB2-218ENST00000639715 ATAD2Q6PL18 1390 aa6.88□□□□□ -1.31
SCARB2-218ENST00000639715 NSD3Q9BZ95 1437 aa6.88□□□□□ -1.31
SCARB2-218ENST00000639715 OS9Q13438 667 aaPredicted RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms