RNA–Protein interactions for RNA: ENST00000639629.1

CCDC7-215, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC7, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-215ENST00000639629 GGCXP38435 758 aa1.43□□□□□ -2.18
CCDC7-215ENST00000639629 LBRQ14739 615 aaKnown RBP1.43□□□□□ -2.18
CCDC7-215ENST00000639629 UPF1Q92900 1129 aaKnown RBP eCLIP1.43□□□□□ -2.18
CCDC7-215ENST00000639629 PDZRN3Q9UPQ7 1066 aa1.43□□□□□ -2.18
CCDC7-215ENST00000639629 THBS1P07996 1170 aa1.43□□□□□ -2.18
CCDC7-215ENST00000639629 GPC1P35052 558 aa1.43□□□□□ -2.18
CCDC7-215ENST00000639629 SH3BP2P78314 561 aa1.43□□□□□ -2.18
CCDC7-215ENST00000639629 KRT76Q01546 638 aa1.43□□□□□ -2.18
CCDC7-215ENST00000639629 GPCPD1Q9NPB8 672 aa1.43□□□□□ -2.18
CCDC7-215ENST00000639629 S1PR4O95977 384 aa1.42□□□□□ -2.18
CCDC7-215ENST00000639629 NR5A1Q13285 461 aa1.42□□□□□ -2.18
CCDC7-215ENST00000639629 LCE3BQ5TA77 95 aa1.42□□□□□ -2.18
CCDC7-215ENST00000639629 GJD4Q96KN9 370 aaPredicted RBP1.42□□□□□ -2.18
CCDC7-215ENST00000639629 SEPT9Q9UHD8 586 aaPredicted RBP1.42□□□□□ -2.18
CCDC7-215ENST00000639629 MAP3K7O43318 606 aa1.42□□□□□ -2.18
CCDC7-215ENST00000639629 PDXDC2PQ6P474 469 aa1.42□□□□□ -2.18
CCDC7-215ENST00000639629 PCDHB3Q9Y5E6 796 aa1.42□□□□□ -2.18
CCDC7-215ENST00000639629 CD2BP2O95400 341 aaKnown RBP1.41□□□□□ -2.18
CCDC7-215ENST00000639629 TIMP2P16035 220 aa1.41□□□□□ -2.18
CCDC7-215ENST00000639629 HIRAP54198 1017 aaPredicted RBP1.41□□□□□ -2.18
CCDC7-215ENST00000639629 BANK1Q8NDB2 785 aa1.41□□□□□ -2.18
CCDC7-215ENST00000639629 ZC3H15Q8WU90 426 aaKnown RBP1.41□□□□□ -2.18
CCDC7-215ENST00000639629 C11orf16Q9NQ32 467 aa1.41□□□□□ -2.18
CCDC7-215ENST00000639629 HCN2Q9UL51 889 aa1.41□□□□□ -2.18
CCDC7-215ENST00000639629 TLL1O43897 1013 aa1.41□□□□□ -2.18
CCDC7-215ENST00000639629 HOXD8P13378 290 aaPredicted RBP1.41□□□□□ -2.18
CCDC7-215ENST00000639629 ZNF697Q5TEC3 545 aa1.41□□□□□ -2.18
CCDC7-215ENST00000639629 TRIM66O15016 1216 aa1.41□□□□□ -2.18
CCDC7-215ENST00000639629 DIXDC1Q155Q3 683 aa1.41□□□□□ -2.18
CCDC7-215ENST00000639629 SH3D19Q5HYK7 790 aa1.41□□□□□ -2.18
CCDC7-215ENST00000639629 ZNF787Q6DD87 383 aa1.41□□□□□ -2.18
CCDC7-215ENST00000639629 GRIP2Q9C0E4 1043 aa1.41□□□□□ -2.18
CCDC7-215ENST00000639629 CDV3Q9UKY7 258 aaKnown RBP1.41□□□□□ -2.18
CCDC7-215ENST00000639629 PLEKHG3A1L390 1219 aa1.4□□□□□ -2.18
CCDC7-215ENST00000639629 LILRA1O75019 489 aa1.4□□□□□ -2.18
CCDC7-215ENST00000639629 COL9A3Q14050 684 aaPredicted RBP1.4□□□□□ -2.18
CCDC7-215ENST00000639629 RBM26Q5T8P6 1007 aaKnown RBP1.4□□□□□ -2.18
CCDC7-215ENST00000639629 RNF19BQ6ZMZ0 732 aa1.4□□□□□ -2.18
CCDC7-215ENST00000639629 SEPT12Q8IYM1 358 aa1.4□□□□□ -2.18
CCDC7-215ENST00000639629 SENP3-EIF4A1A0A087X0R7 540 aa1.4□□□□□ -2.19
CCDC7-215ENST00000639629 MS4A1P11836 297 aa1.4□□□□□ -2.19
CCDC7-215ENST00000639629 CLCN1P35523 988 aa1.4□□□□□ -2.19
CCDC7-215ENST00000639629 KDM4AO75164 1064 aa1.4□□□□□ -2.19
CCDC7-215ENST00000639629 STAG2Q8N3U4 1231 aa1.4□□□□□ -2.19
CCDC7-215ENST00000639629 SLC4A9Q96Q91 983 aa1.4□□□□□ -2.19
CCDC7-215ENST00000639629 NXF1Q9UBU9 619 aaKnown RBP1.4□□□□□ -2.19
CCDC7-215ENST00000639629 GPC6Q9Y625 555 aaPredicted RBP1.4□□□□□ -2.19
CCDC7-215ENST00000639629 ADH1CP00326 375 aa1.4□□□□□ -2.19
CCDC7-215ENST00000639629 FUT2Q10981 343 aa1.4□□□□□ -2.19
CCDC7-215ENST00000639629 TRIM32Q13049 653 aa1.4□□□□□ -2.19
CCDC7-215ENST00000639629 LINC00114Q6XXX2 140 aa1.4□□□□□ -2.19
CCDC7-215ENST00000639629 MRGPRX2Q96LB1 330 aa1.4□□□□□ -2.19
CCDC7-215ENST00000639629 CFAP99D6REC4 459 aa1.39□□□□□ -2.19
CCDC7-215ENST00000639629 RSPH4AQ5TD94 716 aa1.39□□□□□ -2.19
CCDC7-215ENST00000639629 MEIOBQ8N635 442 aa1.39□□□□□ -2.19
CCDC7-215ENST00000639629 ZNF511Q8NB15 262 aa1.39□□□□□ -2.19
CCDC7-215ENST00000639629 XAGE2Q96GT9 111 aa1.39□□□□□ -2.19
CCDC7-215ENST00000639629 KRTAP4-11Q9BYQ6 195 aa1.39□□□□□ -2.19
CCDC7-215ENST00000639629 ERBB4Q15303 1308 aa1.39□□□□□ -2.19
CCDC7-215ENST00000639629 PTPN5P54829 565 aa1.39□□□□□ -2.19
CCDC7-215ENST00000639629 FAM182BQ5T319 152 aa1.39□□□□□ -2.19
CCDC7-215ENST00000639629 KRTAP5-4Q6L8H1 288 aa1.39□□□□□ -2.19
CCDC7-215ENST00000639629 SPINT1O43278 529 aa1.39□□□□□ -2.19
CCDC7-215ENST00000639629 SCARF1Q14162 830 aa1.39□□□□□ -2.19
CCDC7-215ENST00000639629 MTFR1Q15390 333 aa1.39□□□□□ -2.19
CCDC7-215ENST00000639629 GRIPAP1Q4V328 841 aa1.39□□□□□ -2.19
CCDC7-215ENST00000639629 RC3H1Q5TC82 1133 aaKnown RBP1.39□□□□□ -2.19
CCDC7-215ENST00000639629 ZNF385CQ66K41 422 aaPredicted RBP1.39□□□□□ -2.19
CCDC7-215ENST00000639629 HPS1Q92902 700 aa1.39□□□□□ -2.19
CCDC7-215ENST00000639629 CCDC102AQ96A19 550 aa1.39□□□□□ -2.19
CCDC7-215ENST00000639629 AVENQ9NQS1 362 aaPredicted RBP1.39□□□□□ -2.19
CCDC7-215ENST00000639629 ZBTB4Q9P1Z0 1013 aaPredicted RBP1.39□□□□□ -2.19
CCDC7-215ENST00000639629 M0R2N6 131 aa1.38□□□□□ -2.19
CCDC7-215ENST00000639629 PPEF1O14829 653 aaPredicted RBP1.38□□□□□ -2.19
CCDC7-215ENST00000639629 SNRPBP14678 240 aaKnown RBP1.38□□□□□ -2.19
CCDC7-215ENST00000639629 ERVK-9P63128 1117 aa1.38□□□□□ -2.19
CCDC7-215ENST00000639629 SKIV2LQ15477 1246 aaKnown RBP1.38□□□□□ -2.19
CCDC7-215ENST00000639629 PRDM9Q9NQV7 894 aa1.38□□□□□ -2.19
CCDC7-215ENST00000639629 SMAPO00193 183 aa1.38□□□□□ -2.19
CCDC7-215ENST00000639629 CCNYL3P0C7X3 344 aa1.38□□□□□ -2.19
CCDC7-215ENST00000639629 TRIM34Q9BYJ4 488 aa1.38□□□□□ -2.19
CCDC7-215ENST00000639629 FHDC1Q9C0D6 1143 aaPredicted RBP1.38□□□□□ -2.19
CCDC7-215ENST00000639629 PROCP04070 461 aa1.38□□□□□ -2.19
CCDC7-215ENST00000639629 Q6ZNB5 142 aa1.38□□□□□ -2.19
CCDC7-215ENST00000639629 WFS1O76024 890 aa1.37□□□□□ -2.19
CCDC7-215ENST00000639629 SLC51AQ86UW1 340 aa1.37□□□□□ -2.19
CCDC7-215ENST00000639629 PARP9Q8IXQ6 854 aa1.37□□□□□ -2.19
CCDC7-215ENST00000639629 GPR161Q8N6U8 529 aaKnown RBP1.37□□□□□ -2.19
CCDC7-215ENST00000639629 CFHR5Q9BXR6 569 aa1.37□□□□□ -2.19
CCDC7-215ENST00000639629 DNAAF2Q9NVR5 837 aaKnown RBP1.37□□□□□ -2.19
CCDC7-215ENST00000639629 HRCP23327 699 aa1.37□□□□□ -2.19
CCDC7-215ENST00000639629 KCNQ4P56696 695 aa1.37□□□□□ -2.19
CCDC7-215ENST00000639629 GAS6Q14393 721 aa1.37□□□□□ -2.19
CCDC7-215ENST00000639629 ARMC2Q8NEN0 867 aa1.37□□□□□ -2.19
CCDC7-215ENST00000639629 RBM33Q96EV2 1170 aaKnown RBP1.37□□□□□ -2.19
CCDC7-215ENST00000639629 UNC93B1Q9H1C4 597 aa1.37□□□□□ -2.19
CCDC7-215ENST00000639629 ST8SIA5O15466 376 aa1.37□□□□□ -2.19
CCDC7-215ENST00000639629 LZTS3O60299 673 aaPredicted RBP1.37□□□□□ -2.19
CCDC7-215ENST00000639629 MYSM1Q5VVJ2 828 aa1.37□□□□□ -2.19
CCDC7-215ENST00000639629 NFATC2IPQ8NCF5 419 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms