RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 DDX58O95786 925 aaKnown RBP17.85■□□□□ 0.45
UBE3A-227ENST00000638011 SMTNL1A8MU46 457 aa17.85■□□□□ 0.45
UBE3A-227ENST00000638011 TAX1BP1Q86VP1 789 aa17.85■□□□□ 0.45
UBE3A-227ENST00000638011 CTDP1Q9Y5B0 961 aaPredicted RBP17.85■□□□□ 0.45
UBE3A-227ENST00000638011 ANKRD62A6NC57 917 aa17.85■□□□□ 0.45
UBE3A-227ENST00000638011 GOLGA6L9A6NEM1 432 aa17.85■□□□□ 0.45
UBE3A-227ENST00000638011 ZNF397Q8NF99 534 aaPredicted RBP17.84■□□□□ 0.45
UBE3A-227ENST00000638011 CRBNQ96SW2 442 aa17.84■□□□□ 0.45
UBE3A-227ENST00000638011 C6orf163Q5TEZ5 329 aa17.84■□□□□ 0.45
UBE3A-227ENST00000638011 WDR66Q8TBY9 1149 aa17.84■□□□□ 0.45
UBE3A-227ENST00000638011 CNTROBQ8N137 903 aa17.84■□□□□ 0.45
UBE3A-227ENST00000638011 IL27Q8NEV9 243 aa17.84■□□□□ 0.45
UBE3A-227ENST00000638011 TNMDQ9H2S6 317 aa17.84■□□□□ 0.45
UBE3A-227ENST00000638011 SLC4A3P48751 1232 aa17.84■□□□□ 0.45
UBE3A-227ENST00000638011 CCDC175P0C221 793 aa17.84■□□□□ 0.45
UBE3A-227ENST00000638011 NACADO15069 1562 aa17.83■□□□□ 0.45
UBE3A-227ENST00000638011 KCNH8Q96L42 1107 aa17.83■□□□□ 0.45
UBE3A-227ENST00000638011 CAVIN2O95810 425 aa17.83■□□□□ 0.45
UBE3A-227ENST00000638011 DDX12PQ92771 950 aa17.83■□□□□ 0.45
UBE3A-227ENST00000638011 KRT85P78386 507 aa17.83■□□□□ 0.44
UBE3A-227ENST00000638011 CEP57L1Q8IYX8 460 aa17.83■□□□□ 0.44
UBE3A-227ENST00000638011 CPSF2Q9P2I0 782 aaKnown RBP17.83■□□□□ 0.44
UBE3A-227ENST00000638011 GTF2A1P52655 376 aaPredicted RBP17.82■□□□□ 0.44
UBE3A-227ENST00000638011 BRPF3Q9ULD4 1205 aa17.82■□□□□ 0.44
UBE3A-227ENST00000638011 CETN2P41208 172 aa17.82■□□□□ 0.44
UBE3A-227ENST00000638011 RNF214Q8ND24 703 aa17.82■□□□□ 0.44
UBE3A-227ENST00000638011 LRRFIP2Q9Y608 721 aaKnown RBP17.82■□□□□ 0.44
UBE3A-227ENST00000638011 CDK5RAP3Q96JB5 506 aa17.82■□□□□ 0.44
UBE3A-227ENST00000638011 WWC2Q6AWC2 1192 aa17.81■□□□□ 0.44
UBE3A-227ENST00000638011 DAAM2Q86T65 1068 aa17.81■□□□□ 0.44
UBE3A-227ENST00000638011 ARHGAP29Q52LW3 1261 aa17.81■□□□□ 0.44
UBE3A-227ENST00000638011 SCAPERQ9BY12 1400 aa17.81■□□□□ 0.44
UBE3A-227ENST00000638011 PRIMPOLQ96LW4 560 aa17.81■□□□□ 0.44
UBE3A-227ENST00000638011 TAOK3Q9H2K8 898 aa17.81■□□□□ 0.44
UBE3A-227ENST00000638011 MNAT1P51948 309 aa17.8■□□□□ 0.44
UBE3A-227ENST00000638011 G3BP1Q13283 466 aaKnown RBP eCLIP17.8■□□□□ 0.44
UBE3A-227ENST00000638011 PTPN14Q15678 1187 aa17.8■□□□□ 0.44
UBE3A-227ENST00000638011 DNAAF4Q8WXU2 420 aa17.8■□□□□ 0.44
UBE3A-227ENST00000638011 EPB41L2O43491 1005 aaKnown RBP17.8■□□□□ 0.44
UBE3A-227ENST00000638011 PLEKHH1Q9ULM0 1364 aa17.8■□□□□ 0.44
UBE3A-227ENST00000638011 TRIM21P19474 475 aaKnown RBP17.8■□□□□ 0.44
UBE3A-227ENST00000638011 EIF4G1Q04637 1599 aaKnown RBP17.79■□□□□ 0.44
UBE3A-227ENST00000638011 KIF5CO60282 957 aa17.79■□□□□ 0.44
UBE3A-227ENST00000638011 NBPF1Q3BBV0 1214 aa17.79■□□□□ 0.44
UBE3A-227ENST00000638011 DDX46Q7L014 1031 aaKnown RBP17.78■□□□□ 0.44
UBE3A-227ENST00000638011 GPATCH11Q8N954 259 aa17.78■□□□□ 0.44
UBE3A-227ENST00000638011 ERC1Q8IUD2 1116 aa17.78■□□□□ 0.44
UBE3A-227ENST00000638011 BBXQ8WY36 941 aaPredicted RBP17.78■□□□□ 0.44
UBE3A-227ENST00000638011 SFPQP23246 707 aaKnown RBP eCLIP17.78■□□□□ 0.44
UBE3A-227ENST00000638011 GTF2E1P29083 439 aaPredicted RBP17.78■□□□□ 0.44
UBE3A-227ENST00000638011 PKD2Q13563 968 aa17.78■□□□□ 0.44
UBE3A-227ENST00000638011 PAXBP1Q9Y5B6 917 aa17.78■□□□□ 0.44
UBE3A-227ENST00000638011 ANKS4BQ8N8V4 417 aa17.78■□□□□ 0.44
UBE3A-227ENST00000638011 NAA15Q9BXJ9 866 aaKnown RBP17.78■□□□□ 0.44
UBE3A-227ENST00000638011 NUP155O75694 1391 aa17.78■□□□□ 0.44
UBE3A-227ENST00000638011 CCDC144AA2RUR9 1427 aa17.78■□□□□ 0.44
UBE3A-227ENST00000638011 GON4LQ3T8J9 2241 aa17.77■□□□□ 0.44
UBE3A-227ENST00000638011 SLC3A2P08195 630 aaKnown RBP17.77■□□□□ 0.44
UBE3A-227ENST00000638011 VPS37DQ86XT2 251 aa17.77■□□□□ 0.44
UBE3A-227ENST00000638011 MPHOSPH9Q99550 1183 aa17.77■□□□□ 0.44
UBE3A-227ENST00000638011 SPC24Q8NBT2 197 aa17.77■□□□□ 0.44
UBE3A-227ENST00000638011 ZNF330Q9Y3S2 320 aaPredicted RBP17.77■□□□□ 0.43
UBE3A-227ENST00000638011 DNAI2Q9GZS0 605 aa17.77■□□□□ 0.43
UBE3A-227ENST00000638011 CNTLNQ9NXG0 1405 aa17.76■□□□□ 0.43
UBE3A-227ENST00000638011 CDKL5O76039 1030 aa17.76■□□□□ 0.43
UBE3A-227ENST00000638011 HSPA4P34932 840 aa17.76■□□□□ 0.43
UBE3A-227ENST00000638011 PRKRIP1Q9H875 184 aaPredicted RBP17.76■□□□□ 0.43
UBE3A-227ENST00000638011 SKIDA1Q1XH10 827 aa17.76■□□□□ 0.43
UBE3A-227ENST00000638011 TAF4BQ92750 862 aa17.76■□□□□ 0.43
UBE3A-227ENST00000638011 EXOC6Q8TAG9 804 aa17.76■□□□□ 0.43
UBE3A-227ENST00000638011 GTPBP4Q9BZE4 634 aaKnown RBP17.76■□□□□ 0.43
UBE3A-227ENST00000638011 VPS36Q86VN1 386 aa17.75■□□□□ 0.43
UBE3A-227ENST00000638011 GSDMDP57764 484 aa17.75■□□□□ 0.43
UBE3A-227ENST00000638011 CUX1P39880 1505 aa17.74■□□□□ 0.43
UBE3A-227ENST00000638011 TMCO5BA8MYB1 307 aa17.74■□□□□ 0.43
UBE3A-227ENST00000638011 SH3BGRP55822 239 aaPredicted RBP17.74■□□□□ 0.43
UBE3A-227ENST00000638011 PRPF40AO75400 957 aaKnown RBP17.74■□□□□ 0.43
UBE3A-227ENST00000638011 CSB-PGBD3P0DP91 1061 aa17.74■□□□□ 0.43
UBE3A-227ENST00000638011 USP47Q96K76 1375 aa17.74■□□□□ 0.43
UBE3A-227ENST00000638011 TICAM2Q86XR7 235 aa17.74■□□□□ 0.43
UBE3A-227ENST00000638011 STK38Q15208 465 aa17.74■□□□□ 0.43
UBE3A-227ENST00000638011 CCDC7Q96M83 1385 aa17.73■□□□□ 0.43
UBE3A-227ENST00000638011 AMPHP49418 695 aa17.73■□□□□ 0.43
UBE3A-227ENST00000638011 RBM28Q9NW13 759 aaKnown RBP17.73■□□□□ 0.43
UBE3A-227ENST00000638011 COG6Q9Y2V7 657 aa17.73■□□□□ 0.43
UBE3A-227ENST00000638011 C1orf141Q5JVX7 400 aa17.73■□□□□ 0.43
UBE3A-227ENST00000638011 TUBB4AP04350 444 aa17.73■□□□□ 0.43
UBE3A-227ENST00000638011 KIF3CO14782 793 aa17.73■□□□□ 0.43
UBE3A-227ENST00000638011 PAIP2Q9BPZ3 127 aaKnown RBP17.73■□□□□ 0.43
UBE3A-227ENST00000638011 SOX12O15370 315 aa17.72■□□□□ 0.43
UBE3A-227ENST00000638011 POTEJP0CG39 1038 aa17.72■□□□□ 0.43
UBE3A-227ENST00000638011 CASQ1P31415 396 aa17.72■□□□□ 0.43
UBE3A-227ENST00000638011 EHBP1Q8NDI1 1231 aa17.72■□□□□ 0.43
UBE3A-227ENST00000638011 FBXW7Q969H0 707 aa17.72■□□□□ 0.43
UBE3A-227ENST00000638011 BRD4O60885 1362 aaPredicted RBP17.72■□□□□ 0.43
UBE3A-227ENST00000638011 BMS1Q14692 1282 aaKnown RBP17.72■□□□□ 0.43
UBE3A-227ENST00000638011 FAM193AP78312 1265 aa17.72■□□□□ 0.43
UBE3A-227ENST00000638011 KRT222Q8N1A0 295 aa17.72■□□□□ 0.43
UBE3A-227ENST00000638011 TRIM22Q8IYM9 498 aa17.71■□□□□ 0.43
UBE3A-227ENST00000638011 PPP1R12BO60237 982 aaPredicted RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms