RNA–Protein interactions for RNA: ENST00000637613.1

CHD2-228, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-228ENST00000637613 PURBQ96QR8 312 aaKnown RBP7.15□□□□□ -1.26
CHD2-228ENST00000637613 ADAM23O75077 832 aa7.14□□□□□ -1.27
CHD2-228ENST00000637613 IRS1P35568 1242 aa7.14□□□□□ -1.27
CHD2-228ENST00000637613 KRT76Q01546 638 aa7.14□□□□□ -1.27
CHD2-228ENST00000637613 KRI1Q8N9T8 703 aaKnown RBP7.14□□□□□ -1.27
CHD2-228ENST00000637613 PSMG3-AS1Q96PY0 264 aa7.14□□□□□ -1.27
CHD2-228ENST00000637613 IL27Q8NEV9 243 aa7.13□□□□□ -1.27
CHD2-228ENST00000637613 ZMYND15Q9H091 742 aa7.13□□□□□ -1.27
CHD2-228ENST00000637613 KRTAP9-6A0A140TA67 174 aa7.12□□□□□ -1.27
CHD2-228ENST00000637613 ZNF385CQ66K41 422 aaPredicted RBP7.11□□□□□ -1.27
CHD2-228ENST00000637613 CNTNAP3BQ96NU0 1288 aa7.11□□□□□ -1.27
CHD2-228ENST00000637613 CNTNAP3Q9BZ76 1288 aa7.11□□□□□ -1.27
CHD2-228ENST00000637613 MAN1A2O60476 641 aa7.1□□□□□ -1.27
CHD2-228ENST00000637613 HIC1Q14526 733 aa7.1□□□□□ -1.27
CHD2-228ENST00000637613 MINK1Q8N4C8 1332 aaPredicted RBP7.09□□□□□ -1.27
CHD2-228ENST00000637613 TIMP2P16035 220 aa7.09□□□□□ -1.27
CHD2-228ENST00000637613 NNTQ13423 1086 aa7.09□□□□□ -1.27
CHD2-228ENST00000637613 SVOPQ8N4V2 548 aa7.09□□□□□ -1.27
CHD2-228ENST00000637613 MPNDQ8N594 471 aa7.08□□□□□ -1.28
CHD2-228ENST00000637613 GPR161Q8N6U8 529 aaKnown RBP7.08□□□□□ -1.28
CHD2-228ENST00000637613 RSPH6AQ9H0K4 717 aa7.08□□□□□ -1.28
CHD2-228ENST00000637613 PLEKHG3A1L390 1219 aa7.07□□□□□ -1.28
CHD2-228ENST00000637613 ARHGEF15O94989 841 aa7.07□□□□□ -1.28
CHD2-228ENST00000637613 ADH1CP00326 375 aa7.07□□□□□ -1.28
CHD2-228ENST00000637613 SH3BP2P78314 561 aa7.07□□□□□ -1.28
CHD2-228ENST00000637613 AMHR2Q16671 573 aa7.07□□□□□ -1.28
CHD2-228ENST00000637613 PTCRAQ6ISU1 281 aaPredicted RBP7.07□□□□□ -1.28
CHD2-228ENST00000637613 FAM117AQ9C073 453 aa7.07□□□□□ -1.28
CHD2-228ENST00000637613 MSTNO14793 375 aa7.06□□□□□ -1.28
CHD2-228ENST00000637613 JUNDP17535 347 aa7.06□□□□□ -1.28
CHD2-228ENST00000637613 WDR4P57081 412 aaKnown RBP7.06□□□□□ -1.28
CHD2-228ENST00000637613 MAP2K5Q13163 448 aa7.06□□□□□ -1.28
CHD2-228ENST00000637613 NLRP7Q8WX94 980 aa7.06□□□□□ -1.28
CHD2-228ENST00000637613 SCARF2Q96GP6 870 aaPredicted RBP7.06□□□□□ -1.28
CHD2-228ENST00000637613 KLF16Q9BXK1 252 aaPredicted RBP7.06□□□□□ -1.28
CHD2-228ENST00000637613 TLL2Q9Y6L7 1015 aa7.06□□□□□ -1.28
CHD2-228ENST00000637613 IRF6O14896 467 aa7.05□□□□□ -1.28
CHD2-228ENST00000637613 MARSP56192 900 aaKnown RBP7.05□□□□□ -1.28
CHD2-228ENST00000637613 KRTAP1-3Q8IUG1 177 aa7.05□□□□□ -1.28
CHD2-228ENST00000637613 SLURP2P0DP57 97 aa7.04□□□□□ -1.28
CHD2-228ENST00000637613 NUDT12Q9BQG2 462 aa7.04□□□□□ -1.28
CHD2-228ENST00000637613 COL25A1Q9BXS0 654 aaPredicted RBP7.04□□□□□ -1.28
CHD2-228ENST00000637613 UBTFP17480 764 aaKnown RBP7.03□□□□□ -1.28
CHD2-228ENST00000637613 WHAMMQ8TF30 809 aa7.03□□□□□ -1.28
CHD2-228ENST00000637613 CCDC102AQ96A19 550 aa7.03□□□□□ -1.28
CHD2-228ENST00000637613 DDRGK1Q96HY6 314 aa7.03□□□□□ -1.28
CHD2-228ENST00000637613 GOPCQ9HD26 462 aa7.03□□□□□ -1.28
CHD2-228ENST00000637613 PARP9Q8IXQ6 854 aa7.02□□□□□ -1.29
CHD2-228ENST00000637613 SPOCK3Q9BQ16 436 aa7.02□□□□□ -1.29
CHD2-228ENST00000637613 GNPATO15228 680 aa7.01□□□□□ -1.29
CHD2-228ENST00000637613 KDM4AO75164 1064 aa7.01□□□□□ -1.29
CHD2-228ENST00000637613 VARSP26640 1264 aaKnown RBP7.01□□□□□ -1.29
CHD2-228ENST00000637613 PLA2G4EQ3MJ16 856 aa7.01□□□□□ -1.29
CHD2-228ENST00000637613 C6orf118Q5T5N4 469 aa7.01□□□□□ -1.29
CHD2-228ENST00000637613 Q8N3U1 123 aa7.01□□□□□ -1.29
CHD2-228ENST00000637613 NANOS1Q8WY41 292 aaKnown RBP7.01□□□□□ -1.29
CHD2-228ENST00000637613 RNFT1Q5M7Z0 435 aa7□□□□□ -1.29
CHD2-228ENST00000637613 PHOX2BQ99453 314 aa7□□□□□ -1.29
CHD2-228ENST00000637613 C1orf115Q9H7X2 142 aa7□□□□□ -1.29
CHD2-228ENST00000637613 CD46P15529 392 aa6.99□□□□□ -1.29
CHD2-228ENST00000637613 USP46P62068 366 aa6.99□□□□□ -1.29
CHD2-228ENST00000637613 DNMT3LQ9UJW3 386 aa6.99□□□□□ -1.29
CHD2-228ENST00000637613 SOS2Q07890 1332 aaPredicted RBP6.99□□□□□ -1.29
CHD2-228ENST00000637613 FLIIQ13045 1269 aa6.98□□□□□ -1.29
CHD2-228ENST00000637613 HLA-CQ95604 372 aa6.98□□□□□ -1.29
CHD2-228ENST00000637613 UPP2O95045 317 aa6.97□□□□□ -1.29
CHD2-228ENST00000637613 ZIC2O95409 532 aaPredicted RBP6.97□□□□□ -1.29
CHD2-228ENST00000637613 PROCP04070 461 aa6.97□□□□□ -1.29
CHD2-228ENST00000637613 BMP2P12643 396 aa6.97□□□□□ -1.29
CHD2-228ENST00000637613 ZFAND3Q9H8U3 227 aa6.97□□□□□ -1.29
CHD2-228ENST00000637613 K7ELQ4 463 aaPredicted RBP6.96□□□□□ -1.3
CHD2-228ENST00000637613 ITGB2P05107 769 aa6.96□□□□□ -1.3
CHD2-228ENST00000637613 CCNYL3P0C7X3 344 aa6.96□□□□□ -1.3
CHD2-228ENST00000637613 LINC00528Q8N1L1 170 aa6.96□□□□□ -1.3
CHD2-228ENST00000637613 DCAF5Q96JK2 942 aa6.96□□□□□ -1.3
CHD2-228ENST00000637613 HOXA2O43364 376 aa6.95□□□□□ -1.3
CHD2-228ENST00000637613 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.95□□□□□ -1.36e-8■■■■■ 28.1
CHD2-228ENST00000637613 LINC01559Q495D7 138 aa6.95□□□□□ -1.3
CHD2-228ENST00000637613 RETREG3Q86VR2 466 aa6.95□□□□□ -1.3
CHD2-228ENST00000637613 ZNF511Q8NB15 262 aa6.95□□□□□ -1.3
CHD2-228ENST00000637613 BAP1Q92560 729 aa6.95□□□□□ -1.3
CHD2-228ENST00000637613 ITPKCQ96DU7 683 aa6.95□□□□□ -1.3
CHD2-228ENST00000637613 UNC93B1Q9H1C4 597 aa6.95□□□□□ -1.3
CHD2-228ENST00000637613 PTSQ03393 145 aa6.94□□□□□ -1.3
CHD2-228ENST00000637613 A6NJR5 290 aa6.93□□□□□ -1.3
CHD2-228ENST00000637613 MS4A1P11836 297 aa6.93□□□□□ -1.3
CHD2-228ENST00000637613 MEIOBQ8N635 442 aa6.93□□□□□ -1.3
CHD2-228ENST00000637613 GALNT6Q8NCL4 622 aa6.93□□□□□ -1.3
CHD2-228ENST00000637613 SYMPKQ92797 1274 aaKnown RBP6.93□□□□□ -1.3
CHD2-228ENST00000637613 CDK15Q96Q40 435 aa6.93□□□□□ -1.3
CHD2-228ENST00000637613 PODXL2Q9NZ53 605 aa6.93□□□□□ -1.3
CHD2-228ENST00000637613 LCE3BQ5TA77 95 aa6.92□□□□□ -1.3
CHD2-228ENST00000637613 FAM174AQ8TBP5 190 aa6.92□□□□□ -1.3
CHD2-228ENST00000637613 EVA1BQ9NVM1 165 aa6.92□□□□□ -1.3
CHD2-228ENST00000637613 PHF20L1A8MW92 1017 aa6.91□□□□□ -1.3
CHD2-228ENST00000637613 MAP3K10Q02779 954 aa6.91□□□□□ -1.3
CHD2-228ENST00000637613 NR5A1Q13285 461 aa6.91□□□□□ -1.3
CHD2-228ENST00000637613 PTPRNQ16849 979 aa6.91□□□□□ -1.3
CHD2-228ENST00000637613 GIGYF2Q6Y7W6 1299 aaKnown RBP6.91□□□□□ -1.3
CHD2-228ENST00000637613 CCDC155Q8N6L0 562 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms