RNA–Protein interactions for RNA: ENST00000637156.1

CLN8-213, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,897 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-213ENST00000637156 MON2Q7Z3U7 1717 aa28.38■■■□□ 2.13
CLN8-213ENST00000637156 ITSN1Q15811 1721 aa28.37■■■□□ 2.13
CLN8-213ENST00000637156 CADPS2Q86UW7 1296 aa28.36■■■□□ 2.13
CLN8-213ENST00000637156 MTHFSP49914 203 aa28.35■■■□□ 2.13
CLN8-213ENST00000637156 DCCP43146 1447 aa28.34■■■□□ 2.13
CLN8-213ENST00000637156 C1orf167Q5SNV9 1468 aa28.34■■■□□ 2.13
CLN8-213ENST00000637156 MSH6P52701 1360 aa28.34■■■□□ 2.13
CLN8-213ENST00000637156 FBLN1P23142 703 aa28.33■■■□□ 2.13
CLN8-213ENST00000637156 COG3Q96JB2 828 aa28.32■■■□□ 2.12
CLN8-213ENST00000637156 MST1RQ04912 1400 aa28.31■■■□□ 2.12
CLN8-213ENST00000637156 FOXO3O43524 673 aa28.31■■■□□ 2.12
CLN8-213ENST00000637156 TTC21AQ8NDW8 1320 aa28.31■■■□□ 2.12
CLN8-213ENST00000637156 PSME1Q06323 249 aa28.29■■■□□ 2.12
CLN8-213ENST00000637156 NRKQ7Z2Y5 1582 aa28.29■■■□□ 2.12
CLN8-213ENST00000637156 XIRP1Q702N8 1843 aaKnown RBP28.29■■■□□ 2.12
CLN8-213ENST00000637156 KIF20BQ96Q89 1820 aa28.28■■■□□ 2.12
CLN8-213ENST00000637156 HNRNPUQ00839 825 aaKnown RBP eCLIP28.27■■■□□ 2.12
CLN8-213ENST00000637156 SCAF1Q9H7N4 1312 aaKnown RBP28.27■■■□□ 2.12
CLN8-213ENST00000637156 ADAMTS8Q9UP79 889 aa28.26■■■□□ 2.11
CLN8-213ENST00000637156 ANKRD26Q9UPS8 1709 aa28.26■■■□□ 2.11
CLN8-213ENST00000637156 POLKQ9UBT6 870 aa28.25■■■□□ 2.11
CLN8-213ENST00000637156 PAK3O75914 559 aaPredicted RBP28.25■■■□□ 2.11
CLN8-213ENST00000637156 CENPBP07199 599 aaPredicted RBP28.24■■■□□ 2.11
CLN8-213ENST00000637156 ABTB2Q8N961 1025 aa28.22■■■□□ 2.11
CLN8-213ENST00000637156 OVOS2A0A0J9YW53 1432 aa28.22■■■□□ 2.11
CLN8-213ENST00000637156 OVOS2Q6IE36 1432 aa28.22■■■□□ 2.11
CLN8-213ENST00000637156 USP31Q70CQ4 1352 aa28.22■■■□□ 2.11
CLN8-213ENST00000637156 XPCQ01831 940 aaPredicted RBP28.21■■■□□ 2.11
CLN8-213ENST00000637156 SLAIN2Q9P270 581 aa28.21■■■□□ 2.11
CLN8-213ENST00000637156 AATKQ6ZMQ8 1374 aa28.21■■■□□ 2.11
CLN8-213ENST00000637156 NLRP6P59044 892 aa28.21■■■□□ 2.11
CLN8-213ENST00000637156 WDR43Q15061 677 aaKnown RBP eCLIP28.2■■■□□ 2.1
CLN8-213ENST00000637156 CFAP53Q96M91 514 aa28.2■■■□□ 2.1
CLN8-213ENST00000637156 NUTM2GQ5VZR2 741 aa28.19■■■□□ 2.1
CLN8-213ENST00000637156 KRT28Q7Z3Y7 464 aa28.19■■■□□ 2.1
CLN8-213ENST00000637156 AEBP2Q6ZN18 517 aaPredicted RBP28.18■■■□□ 2.1
CLN8-213ENST00000637156 EMILIN1Q9Y6C2 1016 aa28.18■■■□□ 2.1
CLN8-213ENST00000637156 RRS1Q15050 365 aaKnown RBP28.17■■■□□ 2.1
CLN8-213ENST00000637156 DDX17Q92841 729 aaKnown RBP28.17■■■□□ 2.1
CLN8-213ENST00000637156 PNPLA6Q8IY17 1366 aa28.17■■■□□ 2.1
CLN8-213ENST00000637156 PPM1GO15355 546 aaPredicted RBP28.17■■■□□ 2.1
CLN8-213ENST00000637156 BRINP3Q76B58 766 aa28.15■■■□□ 2.1
CLN8-213ENST00000637156 SENP3-EIF4A1A0A087X0R7 540 aa28.14■■■□□ 2.1
CLN8-213ENST00000637156 PIK3C2AO00443 1686 aa28.14■■■□□ 2.09
CLN8-213ENST00000637156 INSRP06213 1382 aa28.13■■■□□ 2.09
CLN8-213ENST00000637156 LTBP4Q8N2S1 1624 aa28.13■■■□□ 2.09
CLN8-213ENST00000637156 SOX12O15370 315 aa28.12■■■□□ 2.09
CLN8-213ENST00000637156 KIF1AQ12756 1690 aa28.11■■■□□ 2.09
CLN8-213ENST00000637156 NPHP3Q7Z494 1330 aa28.1■■■□□ 2.09
CLN8-213ENST00000637156 MAP2P11137 1827 aaKnown RBP28.1■■■□□ 2.09
CLN8-213ENST00000637156 COL3A1P02461 1466 aaPredicted RBP28.08■■■□□ 2.09
CLN8-213ENST00000637156 BLMP54132 1417 aaPredicted RBP28.08■■■□□ 2.09
CLN8-213ENST00000637156 SMG6Q86US8 1419 aaKnown RBP28.08■■■□□ 2.09
CLN8-213ENST00000637156 DIAPH1O60610 1272 aaKnown RBP28.08■■■□□ 2.09
CLN8-213ENST00000637156 ZBED9Q6R2W3 1325 aa28.07■■■□□ 2.08
CLN8-213ENST00000637156 LMOD2Q6P5Q4 547 aa28.06■■■□□ 2.08
CLN8-213ENST00000637156 MAP3K19Q56UN5 1328 aa28.05■■■□□ 2.08
CLN8-213ENST00000637156 NUDCQ9Y266 331 aa28.05■■■□□ 2.08
CLN8-213ENST00000637156 SHPRHQ149N8 1683 aa28.04■■■□□ 2.08
CLN8-213ENST00000637156 CCDC146Q8IYE0 955 aa28.04■■■□□ 2.08
CLN8-213ENST00000637156 U2AF1L5P0DN76 240 aaPredicted RBP28.04■■■□□ 2.08
CLN8-213ENST00000637156 U2AF1Q01081 240 aaKnown RBP eCLIP28.04■■■□□ 2.08
CLN8-213ENST00000637156 IL13P35225 146 aa28.02■■■□□ 2.08
CLN8-213ENST00000637156 TRPM3Q9HCF6 1732 aaPredicted RBP28.02■■■□□ 2.08
CLN8-213ENST00000637156 U2SURPO15042 1029 aaKnown RBP28.02■■■□□ 2.08
CLN8-213ENST00000637156 HSP90AB2PQ58FF8 381 aa28.02■■■□□ 2.08
CLN8-213ENST00000637156 SBNO1A3KN83 1393 aa28.02■■■□□ 2.08
CLN8-213ENST00000637156 MARF1Q9Y4F3 1742 aaKnown RBP28.01■■■□□ 2.07
CLN8-213ENST00000637156 SALL2Q9Y467 1007 aaPredicted RBP28.01■■■□□ 2.07
CLN8-213ENST00000637156 CDK12Q9NYV4 1490 aaPredicted RBP28.01■■■□□ 2.07
CLN8-213ENST00000637156 USP54Q70EL1 1684 aa28■■■□□ 2.07
CLN8-213ENST00000637156 PXDNQ92626 1479 aa28■■■□□ 2.07
CLN8-213ENST00000637156 GCP02774 474 aa27.99■■■□□ 2.07
CLN8-213ENST00000637156 KCNH5Q8NCM2 988 aa27.99■■■□□ 2.07
CLN8-213ENST00000637156 SOS2Q07890 1332 aaPredicted RBP27.98■■■□□ 2.07
CLN8-213ENST00000637156 SPATA31A3Q5VYP0 1347 aa27.98■■■□□ 2.07
CLN8-213ENST00000637156 APAF1O14727 1248 aa27.97■■■□□ 2.07
CLN8-213ENST00000637156 PLEKHG5O94827 1062 aa27.97■■■□□ 2.07
CLN8-213ENST00000637156 AMPHP49418 695 aa27.97■■■□□ 2.07
CLN8-213ENST00000637156 EIF4A2Q14240 407 aaKnown RBP27.95■■■□□ 2.07
CLN8-213ENST00000637156 USP19O94966 1318 aa27.95■■■□□ 2.07
CLN8-213ENST00000637156 RUNDC1Q96C34 613 aa27.95■■■□□ 2.06
CLN8-213ENST00000637156 PEAK1Q9H792 1746 aa27.94■■■□□ 2.06
CLN8-213ENST00000637156 PLEKHF1Q96S99 279 aa27.93■■■□□ 2.06
CLN8-213ENST00000637156 FLT4P35916 1363 aa27.93■■■□□ 2.06
CLN8-213ENST00000637156 HOXC9P31274 260 aa27.92■■■□□ 2.06
CLN8-213ENST00000637156 TNS3Q68CZ2 1445 aa27.92■■■□□ 2.06
CLN8-213ENST00000637156 ALS2Q96Q42 1657 aa27.92■■■□□ 2.06
CLN8-213ENST00000637156 NFAT5O94916 1531 aa27.91■■■□□ 2.06
CLN8-213ENST00000637156 KIF24Q5T7B8 1368 aa27.91■■■□□ 2.06
CLN8-213ENST00000637156 FCHSD2O94868 740 aa27.91■■■□□ 2.06
CLN8-213ENST00000637156 ARHGEF25Q86VW2 580 aa27.9■■■□□ 2.06
CLN8-213ENST00000637156 TCP11L2Q8N4U5 519 aa27.89■■■□□ 2.05
CLN8-213ENST00000637156 CABLES1Q8TDN4 633 aa27.89■■■□□ 2.05
CLN8-213ENST00000637156 SLIT3O75094 1523 aa27.89■■■□□ 2.05
CLN8-213ENST00000637156 HMOX1P09601 288 aa27.88■■■□□ 2.05
CLN8-213ENST00000637156 IP6K1Q92551 441 aa27.88■■■□□ 2.05
CLN8-213ENST00000637156 RSPH6AQ9H0K4 717 aa27.87■■■□□ 2.05
CLN8-213ENST00000637156 ARHGEF10O15013 1369 aa27.86■■■□□ 2.05
CLN8-213ENST00000637156 MED1Q15648 1581 aaPredicted RBP27.85■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms