RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 TECPR2O15040 1411 aa15.08■□□□□ 0.01
CLN6-217ENST00000636964 RRP7AQ9Y3A4 280 aaKnown RBP15.08■□□□□ 0
CLN6-217ENST00000636964 CCDC61Q9Y6R9 512 aa15.08■□□□□ 0
CLN6-217ENST00000636964 PRR36Q9H6K5 1346 aa15.08■□□□□ 0
CLN6-217ENST00000636964 PPM1GO15355 546 aaPredicted RBP15.07■□□□□ 0
CLN6-217ENST00000636964 ZRANB1Q9UGI0 708 aa15.07■□□□□ 0
CLN6-217ENST00000636964 ARHGAP23Q9P227 1491 aa15.07■□□□□ 0
CLN6-217ENST00000636964 U2AF1L5P0DN76 240 aaPredicted RBP15.07■□□□□ 0
CLN6-217ENST00000636964 U2AF1Q01081 240 aaKnown RBP eCLIP15.07■□□□□ 0
CLN6-217ENST00000636964 TBX22Q9Y458 520 aa15.07■□□□□ 0
CLN6-217ENST00000636964 SLIT1O75093 1534 aa15.06■□□□□ 0
CLN6-217ENST00000636964 GOLGA2Q08379 1002 aa15.06■□□□□ 0
CLN6-217ENST00000636964 RNF123Q5XPI4 1314 aa15.06■□□□□ 0
CLN6-217ENST00000636964 TULP1O00294 542 aaPredicted RBP15.06■□□□□ 0
CLN6-217ENST00000636964 NME9Q86XW9 330 aa15.06■□□□□ 0
CLN6-217ENST00000636964 CPS1P31327 1500 aa15.06■□□□□ 0
CLN6-217ENST00000636964 U2SURPO15042 1029 aaKnown RBP15.05■□□□□ 0
CLN6-217ENST00000636964 SPINK5Q9NQ38 1064 aaPredicted RBP15.05■□□□□ 0
CLN6-217ENST00000636964 MED14O60244 1454 aa15.05■□□□□ 0
CLN6-217ENST00000636964 DMRT2Q9Y5R5 561 aa15.05■□□□□ -0
CLN6-217ENST00000636964 ZNF521Q96K83 1311 aa15.05■□□□□ -0
CLN6-217ENST00000636964 PLIN1O60240 522 aa15.04■□□□□ -0
CLN6-217ENST00000636964 GLIPR1L2Q4G1C9 344 aa15.04■□□□□ -0
CLN6-217ENST00000636964 KNDC1Q76NI1 1749 aa15.04■□□□□ -0
CLN6-217ENST00000636964 RRP1P56182 461 aaKnown RBP15.04■□□□□ -0
CLN6-217ENST00000636964 DUSP27Q5VZP5 1158 aa15.04■□□□□ -0
CLN6-217ENST00000636964 SHPRHQ149N8 1683 aa15.04■□□□□ -0
CLN6-217ENST00000636964 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.03■□□□□ -0
CLN6-217ENST00000636964 ATP7BP35670 1465 aa15.03■□□□□ -0
CLN6-217ENST00000636964 TCP11L2Q8N4U5 519 aa15.03■□□□□ -0
CLN6-217ENST00000636964 RUNDC1Q96C34 613 aa15.03■□□□□ -0
CLN6-217ENST00000636964 ZMYND15Q9H091 742 aa15.03■□□□□ -0
CLN6-217ENST00000636964 RBM33Q96EV2 1170 aaKnown RBP15.02■□□□□ -0
CLN6-217ENST00000636964 KCNA6P17658 529 aa15.02■□□□□ -0
CLN6-217ENST00000636964 CEP170BQ9Y4F5 1589 aaPredicted RBP15.02□□□□□ -0.01
CLN6-217ENST00000636964 CPSF1Q10570 1443 aaKnown RBP15.02□□□□□ -0.01
CLN6-217ENST00000636964 SLFN5Q08AF3 891 aa15.01□□□□□ -0.01
CLN6-217ENST00000636964 IPO9Q96P70 1041 aaKnown RBP15.01□□□□□ -0.01
CLN6-217ENST00000636964 ANKLE2Q86XL3 938 aa15.01□□□□□ -0.01
CLN6-217ENST00000636964 PMFBP1Q8TBY8 1022 aa15.01□□□□□ -0.01
CLN6-217ENST00000636964 TAF7LQ5H9L4 462 aa15□□□□□ -0.01
CLN6-217ENST00000636964 ACEP12821 1306 aa15□□□□□ -0.01
CLN6-217ENST00000636964 WWC1Q8IX03 1113 aa15□□□□□ -0.01
CLN6-217ENST00000636964 POLKQ9UBT6 870 aa15□□□□□ -0.01
CLN6-217ENST00000636964 EMILIN1Q9Y6C2 1016 aa14.99□□□□□ -0.01
CLN6-217ENST00000636964 EDC4Q6P2E9 1401 aaKnown RBP14.99□□□□□ -0.01
CLN6-217ENST00000636964 DIAPH1O60610 1272 aaKnown RBP14.98□□□□□ -0.01
CLN6-217ENST00000636964 EXOC6Q8TAG9 804 aa14.98□□□□□ -0.01
CLN6-217ENST00000636964 KIF20BQ96Q89 1820 aa14.98□□□□□ -0.01
CLN6-217ENST00000636964 COG3Q96JB2 828 aa14.98□□□□□ -0.01
CLN6-217ENST00000636964 RRS1Q15050 365 aaKnown RBP14.97□□□□□ -0.01
CLN6-217ENST00000636964 ZNF692Q9BU19 519 aaPredicted RBP14.97□□□□□ -0.01
CLN6-217ENST00000636964 ADAMTSL3P82987 1691 aa14.97□□□□□ -0.01
CLN6-217ENST00000636964 AAMPQ13685 434 aa14.97□□□□□ -0.01
CLN6-217ENST00000636964 ANKRD26Q9UPS8 1709 aa14.97□□□□□ -0.01
CLN6-217ENST00000636964 CDC42BPGQ6DT37 1551 aa14.97□□□□□ -0.01
CLN6-217ENST00000636964 SOX12O15370 315 aa14.96□□□□□ -0.01
CLN6-217ENST00000636964 VSIG10Q8N0Z9 540 aa14.95□□□□□ -0.02
CLN6-217ENST00000636964 E9PSI1 815 aa14.95□□□□□ -0.02
CLN6-217ENST00000636964 RBM10P98175 930 aaKnown RBP14.95□□□□□ -0.02
CLN6-217ENST00000636964 TRMT2AQ8IZ69 625 aaKnown RBP14.95□□□□□ -0.02
CLN6-217ENST00000636964 TTC21BQ7Z4L5 1316 aa14.94□□□□□ -0.02
CLN6-217ENST00000636964 PLEKHG3A1L390 1219 aa14.94□□□□□ -0.02
CLN6-217ENST00000636964 COL3A1P02461 1466 aaPredicted RBP14.94□□□□□ -0.02
CLN6-217ENST00000636964 C20orf194Q5TEA3 1177 aa14.94□□□□□ -0.02
CLN6-217ENST00000636964 NGDNQ8NEJ9 315 aaKnown RBP14.94□□□□□ -0.02
CLN6-217ENST00000636964 NKTRP30414 1462 aaKnown RBP14.94□□□□□ -0.02
CLN6-217ENST00000636964 PLEKHF1Q96S99 279 aa14.93□□□□□ -0.02
CLN6-217ENST00000636964 PTCH1Q13635 1447 aa14.93□□□□□ -0.02
CLN6-217ENST00000636964 MAP2P11137 1827 aaKnown RBP14.93□□□□□ -0.02
CLN6-217ENST00000636964 HMOX1P09601 288 aa14.93□□□□□ -0.02
CLN6-217ENST00000636964 NGEFQ8N5V2 710 aa14.93□□□□□ -0.02
CLN6-217ENST00000636964 PNPLA6Q8IY17 1366 aa14.92□□□□□ -0.02
CLN6-217ENST00000636964 ADGRB2O60241 1585 aa14.92□□□□□ -0.02
CLN6-217ENST00000636964 RTL5Q5HYW3 569 aaPredicted RBP14.92□□□□□ -0.02
CLN6-217ENST00000636964 SETD1BQ9UPS6 1966 aaKnown RBP14.92□□□□□ -0.02
CLN6-217ENST00000636964 MAPK8IP3Q9UPT6 1336 aa14.92□□□□□ -0.02
CLN6-217ENST00000636964 HOMEZQ8IX15 550 aa14.92□□□□□ -0.02
CLN6-217ENST00000636964 ZBTB47Q9UFB7 747 aaPredicted RBP14.92□□□□□ -0.02
CLN6-217ENST00000636964 ITSN1Q15811 1721 aa14.91□□□□□ -0.02
CLN6-217ENST00000636964 BCAR3O75815 825 aa14.91□□□□□ -0.02
CLN6-217ENST00000636964 DHX37Q8IY37 1157 aaKnown RBP14.91□□□□□ -0.02
CLN6-217ENST00000636964 IQSEC2Q5JU85 1478 aa14.91□□□□□ -0.02
CLN6-217ENST00000636964 DIP2AQ14689 1571 aa14.91□□□□□ -0.02
CLN6-217ENST00000636964 CRBNQ96SW2 442 aa14.91□□□□□ -0.02
CLN6-217ENST00000636964 MON2Q7Z3U7 1717 aa14.91□□□□□ -0.02
CLN6-217ENST00000636964 TMPOP42166 694 aaKnown RBP14.91□□□□□ -0.02
CLN6-217ENST00000636964 RGPD8O14715 1765 aaPredicted RBP14.9□□□□□ -0.02
CLN6-217ENST00000636964 AKAP12Q02952 1782 aa14.9□□□□□ -0.02
CLN6-217ENST00000636964 ANP32AP39687 249 aaKnown RBP14.9□□□□□ -0.02
CLN6-217ENST00000636964 USP6P35125 1406 aa14.89□□□□□ -0.03
CLN6-217ENST00000636964 PRKAR2BP31323 418 aa14.89□□□□□ -0.03
CLN6-217ENST00000636964 NUTM2GQ5VZR2 741 aa14.89□□□□□ -0.03
CLN6-217ENST00000636964 XRN1Q8IZH2 1706 aaKnown RBP14.89□□□□□ -0.03
CLN6-217ENST00000636964 RIPK4P57078 832 aa14.88□□□□□ -0.03
CLN6-217ENST00000636964 C14orf37Q86TY3 774 aa14.88□□□□□ -0.03
CLN6-217ENST00000636964 WDR63Q8IWG1 891 aa14.88□□□□□ -0.03
CLN6-217ENST00000636964 PIK3R4Q99570 1358 aa14.88□□□□□ -0.03
CLN6-217ENST00000636964 IL13P35225 146 aa14.87□□□□□ -0.03
CLN6-217ENST00000636964 PHACTR3Q96KR7 559 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms