RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 RGS17Q9UGC6 210 aaPredicted RBP22.15■■□□□ 1.14
CLN6-216ENST00000636876 TRPM3Q9HCF6 1732 aaPredicted RBP22.14■■□□□ 1.14
CLN6-216ENST00000636876 BRD4O60885 1362 aaPredicted RBP22.14■■□□□ 1.14
CLN6-216ENST00000636876 MON2Q7Z3U7 1717 aa22.14■■□□□ 1.13
CLN6-216ENST00000636876 LRRC59Q96AG4 307 aaKnown RBP22.13■■□□□ 1.13
CLN6-216ENST00000636876 TNS3Q68CZ2 1445 aa22.12■■□□□ 1.13
CLN6-216ENST00000636876 SSH2Q76I76 1423 aa22.12■■□□□ 1.13
CLN6-216ENST00000636876 SPATA31A3Q5VYP0 1347 aa22.11■■□□□ 1.13
CLN6-216ENST00000636876 EDC4Q6P2E9 1401 aaKnown RBP22.11■■□□□ 1.13
CLN6-216ENST00000636876 NRKQ7Z2Y5 1582 aa22.11■■□□□ 1.13
CLN6-216ENST00000636876 PAK3O75914 559 aaPredicted RBP22.1■■□□□ 1.13
CLN6-216ENST00000636876 TTC21BQ7Z4L5 1316 aa22.08■■□□□ 1.13
CLN6-216ENST00000636876 ALS2Q96Q42 1657 aa22.08■■□□□ 1.13
CLN6-216ENST00000636876 ZNF316A6NFI3 1004 aaPredicted RBP22.08■■□□□ 1.13
CLN6-216ENST00000636876 PANK3Q9H999 370 aa22.08■■□□□ 1.13
CLN6-216ENST00000636876 CARD14Q9BXL6 1004 aa22.07■■□□□ 1.12
CLN6-216ENST00000636876 ARHGEF10O15013 1369 aa22.07■■□□□ 1.12
CLN6-216ENST00000636876 PNPLA6Q8IY17 1366 aa22.07■■□□□ 1.12
CLN6-216ENST00000636876 JCADQ9P266 1359 aa22.07■■□□□ 1.12
CLN6-216ENST00000636876 TTC21AQ8NDW8 1320 aa22.06■■□□□ 1.12
CLN6-216ENST00000636876 LMOD2Q6P5Q4 547 aa22.05■■□□□ 1.12
CLN6-216ENST00000636876 NSD3Q9BZ95 1437 aa22.05■■□□□ 1.12
CLN6-216ENST00000636876 SHPRHQ149N8 1683 aa22.04■■□□□ 1.12
CLN6-216ENST00000636876 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.04■■□□□ 1.12
CLN6-216ENST00000636876 ABTB2Q8N961 1025 aa22.03■■□□□ 1.12
CLN6-216ENST00000636876 PIK3C2AO00443 1686 aa22.02■■□□□ 1.12
CLN6-216ENST00000636876 POTEAQ6S8J7 498 aa22.02■■□□□ 1.12
CLN6-216ENST00000636876 COL22A1Q8NFW1 1626 aaPredicted RBP22.02■■□□□ 1.11
CLN6-216ENST00000636876 NME9Q86XW9 330 aa22■■□□□ 1.11
CLN6-216ENST00000636876 NUTM2GQ5VZR2 741 aa21.99■■□□□ 1.11
CLN6-216ENST00000636876 NLRP6P59044 892 aa21.98■■□□□ 1.11
CLN6-216ENST00000636876 NLRP13Q86W25 1043 aa21.98■■□□□ 1.11
CLN6-216ENST00000636876 CGNL1Q0VF96 1302 aa21.98■■□□□ 1.11
CLN6-216ENST00000636876 LRP6O75581 1613 aa21.98■■□□□ 1.11
CLN6-216ENST00000636876 USP31Q70CQ4 1352 aa21.98■■□□□ 1.11
CLN6-216ENST00000636876 ZRANB1Q9UGI0 708 aa21.97■■□□□ 1.11
CLN6-216ENST00000636876 USP19O94966 1318 aa21.97■■□□□ 1.11
CLN6-216ENST00000636876 SPATA31A6Q5VVP1 1343 aa21.97■■□□□ 1.11
CLN6-216ENST00000636876 USP54Q70EL1 1684 aa21.96■■□□□ 1.11
CLN6-216ENST00000636876 FYB1O15117 783 aa21.96■■□□□ 1.11
CLN6-216ENST00000636876 PER1O15534 1290 aaPredicted RBP21.96■■□□□ 1.11
CLN6-216ENST00000636876 DDX10Q13206 875 aaKnown RBP21.96■■□□□ 1.11
CLN6-216ENST00000636876 KNSTRNQ9Y448 316 aa21.96■■□□□ 1.11
CLN6-216ENST00000636876 KIF20BQ96Q89 1820 aa21.96■■□□□ 1.11
CLN6-216ENST00000636876 CABLES1Q8TDN4 633 aa21.95■■□□□ 1.1
CLN6-216ENST00000636876 MARF1Q9Y4F3 1742 aaKnown RBP21.94■■□□□ 1.1
CLN6-216ENST00000636876 CRYBG1Q9Y4K1 1723 aa21.94■■□□□ 1.1
CLN6-216ENST00000636876 PLEKHG5O94827 1062 aa21.94■■□□□ 1.1
CLN6-216ENST00000636876 OVOS2A0A0J9YW53 1432 aa21.94■■□□□ 1.1
CLN6-216ENST00000636876 OVOS2Q6IE36 1432 aa21.94■■□□□ 1.1
CLN6-216ENST00000636876 ABCA3Q99758 1704 aa21.94■■□□□ 1.1
CLN6-216ENST00000636876 GGNBP2Q9H3C7 697 aa21.93■■□□□ 1.1
CLN6-216ENST00000636876 PHRF1Q9P1Y6 1649 aaKnown RBP21.92■■□□□ 1.1
CLN6-216ENST00000636876 SLIT3O75094 1523 aa21.92■■□□□ 1.1
CLN6-216ENST00000636876 AMER1Q5JTC6 1135 aaPredicted RBP21.92■■□□□ 1.1
CLN6-216ENST00000636876 COG3Q96JB2 828 aa21.92■■□□□ 1.1
CLN6-216ENST00000636876 NSD2O96028 1365 aa21.91■■□□□ 1.1
CLN6-216ENST00000636876 NUTM2BA6NNL0 878 aaPredicted RBP21.91■■□□□ 1.1
CLN6-216ENST00000636876 NUTM2EB1AL46 878 aaPredicted RBP21.91■■□□□ 1.1
CLN6-216ENST00000636876 NUTM2AQ8IVF1 878 aaPredicted RBP21.91■■□□□ 1.1
CLN6-216ENST00000636876 HAP1P54257 671 aaPredicted RBP21.9■■□□□ 1.1
CLN6-216ENST00000636876 NPC1L1Q9UHC9 1359 aa21.88■■□□□ 1.09
CLN6-216ENST00000636876 GCP02774 474 aa21.88■■□□□ 1.09
CLN6-216ENST00000636876 ANKRD26Q9UPS8 1709 aa21.88■■□□□ 1.09
CLN6-216ENST00000636876 KCNH5Q8NCM2 988 aa21.87■■□□□ 1.09
CLN6-216ENST00000636876 NFAT5O94916 1531 aa21.86■■□□□ 1.09
CLN6-216ENST00000636876 ADAMTS2O95450 1211 aa21.85■■□□□ 1.09
CLN6-216ENST00000636876 SOX12O15370 315 aa21.84■■□□□ 1.09
CLN6-216ENST00000636876 ZC3H6P61129 1189 aaKnown RBP21.83■■□□□ 1.09
CLN6-216ENST00000636876 CC2D1BQ5T0F9 858 aaKnown RBP21.83■■□□□ 1.09
CLN6-216ENST00000636876 CPDO75976 1380 aa21.83■■□□□ 1.08
CLN6-216ENST00000636876 KIAA0232Q92628 1395 aa21.83■■□□□ 1.08
CLN6-216ENST00000636876 MORC1Q86VD1 984 aa21.82■■□□□ 1.08
CLN6-216ENST00000636876 MEX3CQ5U5Q3 659 aaKnown RBP21.81■■□□□ 1.08
CLN6-216ENST00000636876 ARHGEF25Q86VW2 580 aa21.8■■□□□ 1.08
CLN6-216ENST00000636876 PRDM11Q9NQV5 511 aa21.8■■□□□ 1.08
CLN6-216ENST00000636876 CNGB1Q14028 1251 aaPredicted RBP21.79■■□□□ 1.08
CLN6-216ENST00000636876 FAM83GA6ND36 823 aa21.78■■□□□ 1.08
CLN6-216ENST00000636876 FBLN1P23142 703 aa21.78■■□□□ 1.08
CLN6-216ENST00000636876 AATKQ6ZMQ8 1374 aa21.77■■□□□ 1.08
CLN6-216ENST00000636876 TNNT2P45379 298 aaPredicted RBP21.77■■□□□ 1.08
CLN6-216ENST00000636876 CHRNA2Q15822 529 aa21.77■■□□□ 1.08
CLN6-216ENST00000636876 C8orf37Q96NL8 207 aa21.77■■□□□ 1.08
CLN6-216ENST00000636876 COL14A1Q05707 1796 aaKnown RBP21.76■■□□□ 1.07
CLN6-216ENST00000636876 ZBTB7CA1YPR0 619 aa21.76■■□□□ 1.07
CLN6-216ENST00000636876 MAP3K19Q56UN5 1328 aa21.76■■□□□ 1.07
CLN6-216ENST00000636876 LTN1O94822 1766 aa21.75■■□□□ 1.07
CLN6-216ENST00000636876 NGLY1Q96IV0 654 aa21.75■■□□□ 1.07
CLN6-216ENST00000636876 RRS1Q15050 365 aaKnown RBP21.74■■□□□ 1.07
CLN6-216ENST00000636876 COL18A1P39060 1754 aa21.74■■□□□ 1.07
CLN6-216ENST00000636876 PLCH1Q4KWH8 1693 aa21.73■■□□□ 1.07
CLN6-216ENST00000636876 LMO7Q8WWI1 1683 aa21.73■■□□□ 1.07
CLN6-216ENST00000636876 SLIT2O94813 1529 aa21.73■■□□□ 1.07
CLN6-216ENST00000636876 ABCC6O95255 1503 aa21.73■■□□□ 1.07
CLN6-216ENST00000636876 MAP2P11137 1827 aaKnown RBP21.72■■□□□ 1.07
CLN6-216ENST00000636876 FNBP4Q8N3X1 1017 aaPredicted RBP21.72■■□□□ 1.07
CLN6-216ENST00000636876 POLKQ9UBT6 870 aa21.72■■□□□ 1.07
CLN6-216ENST00000636876 AFF2P51816 1311 aa21.72■■□□□ 1.07
CLN6-216ENST00000636876 PARD3Q8TEW0 1356 aa21.72■■□□□ 1.07
CLN6-216ENST00000636876 ZNF772Q68DY9 489 aaPredicted RBP21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms