RNA–Protein interactions for RNA: ENST00000635721.1

SSRP1-205, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-205ENST00000635721 RSPH6AQ9H0K4 717 aa10□□□□□ -0.81
SSRP1-205ENST00000635721 SLC12A5Q9H2X9 1139 aa10□□□□□ -0.81
SSRP1-205ENST00000635721 C19orf44Q9H6X5 657 aa10□□□□□ -0.81
SSRP1-205ENST00000635721 KDM2BQ8NHM5 1336 aa10□□□□□ -0.81
SSRP1-205ENST00000635721 PER1O15534 1290 aaPredicted RBP9.99□□□□□ -0.81
SSRP1-205ENST00000635721 FAM43AQ8N2R8 423 aa9.99□□□□□ -0.81
SSRP1-205ENST00000635721 ANO8Q9HCE9 1232 aaPredicted RBP9.99□□□□□ -0.81
SSRP1-205ENST00000635721 CABP1Q9NZU7 370 aa9.99□□□□□ -0.81
SSRP1-205ENST00000635721 AAMPQ13685 434 aa9.98□□□□□ -0.81
SSRP1-205ENST00000635721 CENPQQ7L2Z9 268 aaPredicted RBP9.98□□□□□ -0.81
SSRP1-205ENST00000635721 PMFBP1Q8TBY8 1022 aa9.98□□□□□ -0.81
SSRP1-205ENST00000635721 ORAI2Q96SN7 254 aa9.98□□□□□ -0.81
SSRP1-205ENST00000635721 TOPAZ1Q8N9V7 1692 aa9.98□□□□□ -0.81
SSRP1-205ENST00000635721 NCOA3Q9Y6Q9 1424 aa9.98□□□□□ -0.81
SSRP1-205ENST00000635721 CDC42BPGQ6DT37 1551 aa9.97□□□□□ -0.81
SSRP1-205ENST00000635721 EXOC6Q8TAG9 804 aa9.97□□□□□ -0.81
SSRP1-205ENST00000635721 PANK3Q9H999 370 aa9.97□□□□□ -0.81
SSRP1-205ENST00000635721 ATP7BP35670 1465 aa9.97□□□□□ -0.81
SSRP1-205ENST00000635721 AKAP12Q02952 1782 aa9.96□□□□□ -0.81
SSRP1-205ENST00000635721 ATF3P18847 181 aa9.96□□□□□ -0.82
SSRP1-205ENST00000635721 DDX17Q92841 729 aaKnown RBP9.96□□□□□ -0.82
SSRP1-205ENST00000635721 PUS7Q96PZ0 661 aaKnown RBP9.96□□□□□ -0.82
SSRP1-205ENST00000635721 MSH6P52701 1360 aa9.96□□□□□ -0.82
SSRP1-205ENST00000635721 NPC1L1Q9UHC9 1359 aa9.96□□□□□ -0.82
SSRP1-205ENST00000635721 MST1RQ04912 1400 aa9.96□□□□□ -0.82
SSRP1-205ENST00000635721 PPIP5K1Q6PFW1 1433 aa9.96□□□□□ -0.82
SSRP1-205ENST00000635721 CD163L1Q9NR16 1453 aa9.96□□□□□ -0.82
SSRP1-205ENST00000635721 VIRMAQ69YN4 1812 aaKnown RBP9.96□□□□□ -0.82
SSRP1-205ENST00000635721 SLC24A1O60721 1099 aa9.95□□□□□ -0.82
SSRP1-205ENST00000635721 NFKBIBQ15653 356 aa9.95□□□□□ -0.82
SSRP1-205ENST00000635721 CDCA8Q53HL2 280 aa9.95□□□□□ -0.82
SSRP1-205ENST00000635721 ESCO1Q5FWF5 840 aa9.95□□□□□ -0.82
SSRP1-205ENST00000635721 IL27Q8NEV9 243 aa9.95□□□□□ -0.82
SSRP1-205ENST00000635721 CARD14Q9BXL6 1004 aa9.95□□□□□ -0.82
SSRP1-205ENST00000635721 SALL2Q9Y467 1007 aaPredicted RBP9.95□□□□□ -0.82
SSRP1-205ENST00000635721 CCDC61Q9Y6R9 512 aa9.95□□□□□ -0.82
SSRP1-205ENST00000635721 C1orf167Q5SNV9 1468 aa9.95□□□□□ -0.82
SSRP1-205ENST00000635721 ITSN1Q15811 1721 aa9.95□□□□□ -0.82
SSRP1-205ENST00000635721 ACEP12821 1306 aa9.94□□□□□ -0.82
SSRP1-205ENST00000635721 CNGB1Q14028 1251 aaPredicted RBP9.94□□□□□ -0.82
SSRP1-205ENST00000635721 FAM161AQ3B820 660 aa9.94□□□□□ -0.82
SSRP1-205ENST00000635721 CERKQ8TCT0 537 aa9.94□□□□□ -0.82
SSRP1-205ENST00000635721 ATAD2Q6PL18 1390 aa9.93□□□□□ -0.82
SSRP1-205ENST00000635721 PLEKHG3A1L390 1219 aa9.93□□□□□ -0.82
SSRP1-205ENST00000635721 CADPS2Q86UW7 1296 aa9.93□□□□□ -0.82
SSRP1-205ENST00000635721 SLAIN2Q9P270 581 aa9.93□□□□□ -0.82
SSRP1-205ENST00000635721 PHF8Q9UPP1 1060 aa9.93□□□□□ -0.82
SSRP1-205ENST00000635721 ANKARQ7Z5J8 1434 aa9.92□□□□□ -0.82
SSRP1-205ENST00000635721 A0A1W2PP64 1363 aa9.92□□□□□ -0.82
SSRP1-205ENST00000635721 NINLQ9Y2I6 1382 aa9.92□□□□□ -0.82
SSRP1-205ENST00000635721 ZNF521Q96K83 1311 aa9.92□□□□□ -0.82
SSRP1-205ENST00000635721 XPCQ01831 940 aaPredicted RBP9.92□□□□□ -0.82
SSRP1-205ENST00000635721 NCBP3Q53F19 620 aaKnown RBP9.92□□□□□ -0.82
SSRP1-205ENST00000635721 TRMT2AQ8IZ69 625 aaKnown RBP9.92□□□□□ -0.82
SSRP1-205ENST00000635721 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.92□□□□□ -0.82
SSRP1-205ENST00000635721 MON2Q7Z3U7 1717 aa9.92□□□□□ -0.82
SSRP1-205ENST00000635721 DCCP43146 1447 aa9.91□□□□□ -0.82
SSRP1-205ENST00000635721 CPSF1Q10570 1443 aaKnown RBP9.91□□□□□ -0.82
SSRP1-205ENST00000635721 FOXO3O43524 673 aa9.91□□□□□ -0.82
SSRP1-205ENST00000635721 BRINP3Q76B58 766 aa9.91□□□□□ -0.82
SSRP1-205ENST00000635721 ZRANB1Q9UGI0 708 aa9.91□□□□□ -0.82
SSRP1-205ENST00000635721 ROBO1Q9Y6N7 1651 aa9.9□□□□□ -0.82
SSRP1-205ENST00000635721 PIP4K2BP78356 416 aa9.9□□□□□ -0.82
SSRP1-205ENST00000635721 NGDNQ8NEJ9 315 aaKnown RBP9.9□□□□□ -0.82
SSRP1-205ENST00000635721 ANKRD36BQ8N2N9 1353 aa9.89□□□□□ -0.83
SSRP1-205ENST00000635721 UBAP1LF5GYI3 381 aa9.89□□□□□ -0.83
SSRP1-205ENST00000635721 HDGFL2Q7Z4V5 671 aaPredicted RBP9.89□□□□□ -0.83
SSRP1-205ENST00000635721 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.89□□□□□ -0.83
SSRP1-205ENST00000635721 NSD3Q9BZ95 1437 aa9.89□□□□□ -0.83
SSRP1-205ENST00000635721 POLR3AO14802 1390 aaPredicted RBP9.88□□□□□ -0.83
SSRP1-205ENST00000635721 TRPM3Q9HCF6 1732 aaPredicted RBP9.88□□□□□ -0.83
SSRP1-205ENST00000635721 KIF1AQ12756 1690 aa9.88□□□□□ -0.83
SSRP1-205ENST00000635721 C8orf34Q49A92 452 aa9.88□□□□□ -0.83
SSRP1-205ENST00000635721 L1TD1Q5T7N2 865 aaKnown RBP9.88□□□□□ -0.83
SSRP1-205ENST00000635721 KRT28Q7Z3Y7 464 aa9.88□□□□□ -0.83
SSRP1-205ENST00000635721 TERF2IPQ9NYB0 399 aa9.88□□□□□ -0.83
SSRP1-205ENST00000635721 ISY1Q9ULR0 285 aaKnown RBP9.88□□□□□ -0.83
SSRP1-205ENST00000635721 KIF20BQ96Q89 1820 aa9.88□□□□□ -0.83
SSRP1-205ENST00000635721 NRKQ7Z2Y5 1582 aa9.88□□□□□ -0.83
SSRP1-205ENST00000635721 TTC21BQ7Z4L5 1316 aa9.87□□□□□ -0.83
SSRP1-205ENST00000635721 NHSL1Q5SYE7 1610 aa9.87□□□□□ -0.83
SSRP1-205ENST00000635721 TOM1O60784 492 aa9.87□□□□□ -0.83
SSRP1-205ENST00000635721 FBLN1P23142 703 aa9.87□□□□□ -0.83
SSRP1-205ENST00000635721 PSME1Q06323 249 aa9.87□□□□□ -0.83
SSRP1-205ENST00000635721 AMER1Q5JTC6 1135 aaPredicted RBP9.87□□□□□ -0.83
SSRP1-205ENST00000635721 CC2D1BQ5T0F9 858 aaKnown RBP9.87□□□□□ -0.83
SSRP1-205ENST00000635721 NUTM2GQ5VZR2 741 aa9.87□□□□□ -0.83
SSRP1-205ENST00000635721 NME9Q86XW9 330 aa9.87□□□□□ -0.83
SSRP1-205ENST00000635721 ZNF692Q9BU19 519 aaPredicted RBP9.87□□□□□ -0.83
SSRP1-205ENST00000635721 DAXXQ9UER7 740 aaPredicted RBP9.87□□□□□ -0.83
SSRP1-205ENST00000635721 USP6P35125 1406 aa9.87□□□□□ -0.83
SSRP1-205ENST00000635721 SSH2Q76I76 1423 aa9.87□□□□□ -0.83
SSRP1-205ENST00000635721 MARF1Q9Y4F3 1742 aaKnown RBP9.87□□□□□ -0.83
SSRP1-205ENST00000635721 FYB1O15117 783 aa9.86□□□□□ -0.83
SSRP1-205ENST00000635721 FRAT1Q92837 279 aaPredicted RBP9.86□□□□□ -0.83
SSRP1-205ENST00000635721 GGNBP2Q9H3C7 697 aa9.86□□□□□ -0.83
SSRP1-205ENST00000635721 KNSTRNQ9Y448 316 aa9.86□□□□□ -0.83
SSRP1-205ENST00000635721 IQSEC2Q5JU85 1478 aa9.85□□□□□ -0.83
SSRP1-205ENST00000635721 PLEKHG5O94827 1062 aa9.85□□□□□ -0.83
SSRP1-205ENST00000635721 PDE3AQ14432 1141 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms