RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 DLC1Q96QB1 1528 aa9.45□□□□□ -0.9
BRCA1-230ENST00000634433 TERF2IPQ9NYB0 399 aa9.45□□□□□ -0.9
BRCA1-230ENST00000634433 RNF123Q5XPI4 1314 aa9.45□□□□□ -0.9
BRCA1-230ENST00000634433 ABCC11Q96J66 1382 aa9.44□□□□□ -0.9
BRCA1-230ENST00000634433 TULP4Q9NRJ4 1543 aa9.44□□□□□ -0.9
BRCA1-230ENST00000634433 RBM25P49756 843 aaKnown RBP9.44□□□□□ -0.9
BRCA1-230ENST00000634433 SIRT1Q96EB6 747 aa9.44□□□□□ -0.9
BRCA1-230ENST00000634433 CABP2Q9NPB3 220 aa9.44□□□□□ -0.9
BRCA1-230ENST00000634433 SAFB2Q14151 953 aaKnown RBP eCLIP9.44□□□□□ -0.92e-6■□□□□ 10.9
BRCA1-230ENST00000634433 USP32Q8NFA0 1604 aa9.44□□□□□ -0.9
BRCA1-230ENST00000634433 POLR3AO14802 1390 aaPredicted RBP9.43□□□□□ -0.9
BRCA1-230ENST00000634433 ZMYND15Q9H091 742 aa9.43□□□□□ -0.9
BRCA1-230ENST00000634433 BRPF3Q9ULD4 1205 aa9.43□□□□□ -0.9
BRCA1-230ENST00000634433 NLRP1Q9C000 1473 aa9.43□□□□□ -0.9
BRCA1-230ENST00000634433 HDGFL2Q7Z4V5 671 aaPredicted RBP9.43□□□□□ -0.9
BRCA1-230ENST00000634433 CFAP53Q96M91 514 aa9.43□□□□□ -0.9
BRCA1-230ENST00000634433 MINK1Q8N4C8 1332 aaPredicted RBP9.43□□□□□ -0.9
BRCA1-230ENST00000634433 MED14O60244 1454 aa9.42□□□□□ -0.9
BRCA1-230ENST00000634433 NEUROD2Q15784 382 aa9.42□□□□□ -0.9
BRCA1-230ENST00000634433 ZNF692Q9BU19 519 aaPredicted RBP9.42□□□□□ -0.9
BRCA1-230ENST00000634433 CDK19Q9BWU1 502 aa9.42□□□□□ -0.9
BRCA1-230ENST00000634433 SALL2Q9Y467 1007 aaPredicted RBP9.42□□□□□ -0.9
BRCA1-230ENST00000634433 ZNF335Q9H4Z2 1342 aaPredicted RBP9.42□□□□□ -0.9
BRCA1-230ENST00000634433 TMEM2Q9UHN6 1383 aa9.42□□□□□ -0.9
BRCA1-230ENST00000634433 NCKAP5LQ9HCH0 1330 aa9.41□□□□□ -0.9
BRCA1-230ENST00000634433 RCAN3Q9UKA8 241 aa9.41□□□□□ -0.9
BRCA1-230ENST00000634433 RGS22Q8NE09 1264 aa9.4□□□□□ -0.9
BRCA1-230ENST00000634433 EID1Q9Y6B2 187 aa9.4□□□□□ -0.91
BRCA1-230ENST00000634433 FAM135BQ49AJ0 1406 aa9.39□□□□□ -0.91
BRCA1-230ENST00000634433 GOLGA2Q08379 1002 aa9.39□□□□□ -0.91
BRCA1-230ENST00000634433 PKNOX2Q96KN3 472 aa9.39□□□□□ -0.91
BRCA1-230ENST00000634433 RSPH6AQ9H0K4 717 aa9.39□□□□□ -0.91
BRCA1-230ENST00000634433 A0A1W2PP64 1363 aa9.38□□□□□ -0.91
BRCA1-230ENST00000634433 SENP3-EIF4A1A0A087X0R7 540 aa9.38□□□□□ -0.91
BRCA1-230ENST00000634433 HSPA1LP34931 641 aa9.38□□□□□ -0.91
BRCA1-230ENST00000634433 PLEKHG1Q9ULL1 1385 aa9.38□□□□□ -0.91
BRCA1-230ENST00000634433 RGL2O15211 777 aa9.38□□□□□ -0.91
BRCA1-230ENST00000634433 WAPLQ7Z5K2 1190 aa9.38□□□□□ -0.91
BRCA1-230ENST00000634433 SETD1AO15047 1707 aaKnown RBP9.38□□□□□ -0.91
BRCA1-230ENST00000634433 TECPR2O15040 1411 aa9.37□□□□□ -0.91
BRCA1-230ENST00000634433 WASLO00401 505 aaPredicted RBP9.37□□□□□ -0.91
BRCA1-230ENST00000634433 MTHFSP49914 203 aa9.37□□□□□ -0.91
BRCA1-230ENST00000634433 RRP1P56182 461 aaKnown RBP9.37□□□□□ -0.91
BRCA1-230ENST00000634433 MAPK8IP2Q13387 824 aaPredicted RBP9.37□□□□□ -0.91
BRCA1-230ENST00000634433 THEMISQ8N1K5 641 aaPredicted RBP9.37□□□□□ -0.91
BRCA1-230ENST00000634433 UBR1Q8IWV7 1749 aa9.37□□□□□ -0.91
BRCA1-230ENST00000634433 METP08581 1390 aa9.37□□□□□ -0.91
BRCA1-230ENST00000634433 A0A0U1RQG5 324 aaPredicted RBP9.37□□□□□ -0.91
BRCA1-230ENST00000634433 APBB1O00213 710 aa9.37□□□□□ -0.91
BRCA1-230ENST00000634433 TNNT2P45379 298 aaPredicted RBP9.37□□□□□ -0.91
BRCA1-230ENST00000634433 VASPP50552 380 aaPredicted RBP9.37□□□□□ -0.91
BRCA1-230ENST00000634433 TXNDC2Q86VQ3 553 aa9.37□□□□□ -0.91
BRCA1-230ENST00000634433 CDCA7LQ96GN5 454 aa9.37□□□□□ -0.91
BRCA1-230ENST00000634433 CABP1Q9NZU7 370 aa9.37□□□□□ -0.91
BRCA1-230ENST00000634433 ZNF521Q96K83 1311 aa9.36□□□□□ -0.91
BRCA1-230ENST00000634433 NRXN3Q9Y4C0 1643 aa9.36□□□□□ -0.91
BRCA1-230ENST00000634433 RUNDC1Q96C34 613 aa9.36□□□□□ -0.91
BRCA1-230ENST00000634433 ATP7BP35670 1465 aa9.36□□□□□ -0.91
BRCA1-230ENST00000634433 APAF1O14727 1248 aa9.36□□□□□ -0.91
BRCA1-230ENST00000634433 KNDC1Q76NI1 1749 aa9.35□□□□□ -0.91
BRCA1-230ENST00000634433 TMED8Q6PL24 325 aaPredicted RBP9.35□□□□□ -0.91
BRCA1-230ENST00000634433 CCDC146Q8IYE0 955 aa9.35□□□□□ -0.91
BRCA1-230ENST00000634433 ZFP91Q96JP5 570 aaPredicted RBP9.35□□□□□ -0.91
BRCA1-230ENST00000634433 E9PSI1 815 aa9.35□□□□□ -0.91
BRCA1-230ENST00000634433 FYB1O15117 783 aa9.35□□□□□ -0.91
BRCA1-230ENST00000634433 HMGB1P09429 215 aaKnown RBP9.35□□□□□ -0.91
BRCA1-230ENST00000634433 PLEKHH1Q9ULM0 1364 aa9.35□□□□□ -0.91
BRCA1-230ENST00000634433 SLFN5Q08AF3 891 aa9.34□□□□□ -0.91
BRCA1-230ENST00000634433 PNNQ9H307 717 aaKnown RBP9.34□□□□□ -0.91
BRCA1-230ENST00000634433 TBX22Q9Y458 520 aa9.34□□□□□ -0.91
BRCA1-230ENST00000634433 CD163L1Q9NR16 1453 aa9.34□□□□□ -0.91
BRCA1-230ENST00000634433 LTKP29376 864 aa9.34□□□□□ -0.91
BRCA1-230ENST00000634433 DUSP27Q5VZP5 1158 aa9.34□□□□□ -0.91
BRCA1-230ENST00000634433 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.34□□□□□ -0.91
BRCA1-230ENST00000634433 GGNBP2Q9H3C7 697 aa9.34□□□□□ -0.91
BRCA1-230ENST00000634433 CCDC61Q9Y6R9 512 aa9.34□□□□□ -0.91
BRCA1-230ENST00000634433 SLIT1O75093 1534 aa9.33□□□□□ -0.92
BRCA1-230ENST00000634433 ADAMTS13Q76LX8 1427 aa9.33□□□□□ -0.92
BRCA1-230ENST00000634433 ANKLE2Q86XL3 938 aa9.33□□□□□ -0.92
BRCA1-230ENST00000634433 NUDT16Q96DE0 195 aaKnown RBP9.33□□□□□ -0.92
BRCA1-230ENST00000634433 NPHP4O75161 1426 aaPredicted RBP9.33□□□□□ -0.92
BRCA1-230ENST00000634433 ARHGAP23Q9P227 1491 aa9.33□□□□□ -0.92
BRCA1-230ENST00000634433 TRMT2AQ8IZ69 625 aaKnown RBP9.33□□□□□ -0.92
BRCA1-230ENST00000634433 CWC22Q9HCG8 908 aaKnown RBP9.33□□□□□ -0.92
BRCA1-230ENST00000634433 USP35Q9P2H5 1018 aa9.33□□□□□ -0.92
BRCA1-230ENST00000634433 B4GALNT3Q6L9W6 998 aa9.32□□□□□ -0.92
BRCA1-230ENST00000634433 CCDC27Q2M243 656 aa9.32□□□□□ -0.92
BRCA1-230ENST00000634433 EDC4Q6P2E9 1401 aaKnown RBP9.32□□□□□ -0.92
BRCA1-230ENST00000634433 PPIP5K1Q6PFW1 1433 aa9.32□□□□□ -0.92
BRCA1-230ENST00000634433 ANKRD26Q9UPS8 1709 aa9.31□□□□□ -0.92
BRCA1-230ENST00000634433 U2AF1L5P0DN76 240 aaPredicted RBP9.31□□□□□ -0.92
BRCA1-230ENST00000634433 U2AF1Q01081 240 aaKnown RBP eCLIP9.31□□□□□ -0.92
BRCA1-230ENST00000634433 WDR63Q8IWG1 891 aa9.31□□□□□ -0.92
BRCA1-230ENST00000634433 LRRC7Q96NW7 1537 aa9.31□□□□□ -0.92
BRCA1-230ENST00000634433 STRCP1A6NGW2 1772 aa9.31□□□□□ -0.92
BRCA1-230ENST00000634433 CPSF1Q10570 1443 aaKnown RBP9.31□□□□□ -0.92
BRCA1-230ENST00000634433 AEBP1Q8IUX7 1158 aa9.3□□□□□ -0.92
BRCA1-230ENST00000634433 WWC1Q8IX03 1113 aa9.3□□□□□ -0.92
BRCA1-230ENST00000634433 TCP11L2Q8N4U5 519 aa9.3□□□□□ -0.92
BRCA1-230ENST00000634433 DIP2AQ14689 1571 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms