RNA–Protein interactions for RNA: ENST00000630424.2

UBE3A-220, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 5,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-220ENST00000630424 TMEM132AQ24JP5 1023 aa17.04■□□□□ 0.32
UBE3A-220ENST00000630424 RBM5P52756 815 aaKnown RBP eCLIP17.03■□□□□ 0.32
UBE3A-220ENST00000630424 CCDC158Q5M9N0 1113 aa17.03■□□□□ 0.32
UBE3A-220ENST00000630424 ZNF592Q92610 1267 aa17.03■□□□□ 0.32
UBE3A-220ENST00000630424 POGZQ7Z3K3 1410 aa17.03■□□□□ 0.32
UBE3A-220ENST00000630424 OFD1O75665 1012 aa17.02■□□□□ 0.32
UBE3A-220ENST00000630424 NINLQ9Y2I6 1382 aa17.02■□□□□ 0.32
UBE3A-220ENST00000630424 ODF2Q5BJF6 829 aa17.02■□□□□ 0.31
UBE3A-220ENST00000630424 NCOA2Q15596 1464 aa17.02■□□□□ 0.31
UBE3A-220ENST00000630424 PSMA5P28066 241 aa17.02■□□□□ 0.31
UBE3A-220ENST00000630424 BICDL1Q6ZP65 573 aa17.02■□□□□ 0.31
UBE3A-220ENST00000630424 SIL1Q9H173 461 aa17.02■□□□□ 0.31
UBE3A-220ENST00000630424 CDC45O75419 566 aa17.01■□□□□ 0.31
UBE3A-220ENST00000630424 TTC39AQ5SRH9 613 aa17.01■□□□□ 0.31
UBE3A-220ENST00000630424 CUX1P39880 1505 aa17.01■□□□□ 0.31
UBE3A-220ENST00000630424 SASS6Q6UVJ0 657 aa17.01■□□□□ 0.31
UBE3A-220ENST00000630424 PPP2R1AP30153 589 aa17.01■□□□□ 0.31
UBE3A-220ENST00000630424 SDF4Q9BRK5 362 aa17■□□□□ 0.31
UBE3A-220ENST00000630424 NAP1L1P55209 391 aaKnown RBP17■□□□□ 0.31
UBE3A-220ENST00000630424 ZFYVE27Q5T4F4 411 aa17■□□□□ 0.31
UBE3A-220ENST00000630424 PNISRQ8TF01 805 aaKnown RBP17■□□□□ 0.31
UBE3A-220ENST00000630424 NCAPD3P42695 1498 aa17■□□□□ 0.31
UBE3A-220ENST00000630424 RTEL1-TNFRSF6BF6WH68 1400 aa17■□□□□ 0.31
UBE3A-220ENST00000630424 HOMER1Q86YM7 354 aa17■□□□□ 0.31
UBE3A-220ENST00000630424 STK11IPQ8N1F8 1099 aa17■□□□□ 0.31
UBE3A-220ENST00000630424 GNAI2P04899 355 aa16.99■□□□□ 0.31
UBE3A-220ENST00000630424 TSR2Q969E8 191 aaKnown RBP16.99■□□□□ 0.31
UBE3A-220ENST00000630424 EPS15P42566 896 aa16.99■□□□□ 0.31
UBE3A-220ENST00000630424 C22orf23Q9BZE7 217 aa16.99■□□□□ 0.31
UBE3A-220ENST00000630424 CNTLNQ9NXG0 1405 aa16.99■□□□□ 0.31
UBE3A-220ENST00000630424 CCDC57Q2TAC2 916 aa16.99■□□□□ 0.31
UBE3A-220ENST00000630424 C1orf115Q9H7X2 142 aa16.99■□□□□ 0.31
UBE3A-220ENST00000630424 CHMP5Q9NZZ3 219 aa16.99■□□□□ 0.31
UBE3A-220ENST00000630424 ERC1Q8IUD2 1116 aa16.98■□□□□ 0.31
UBE3A-220ENST00000630424 PAF1Q8N7H5 531 aa16.98■□□□□ 0.31
UBE3A-220ENST00000630424 SRCIN1Q9C0H9 1055 aa16.98■□□□□ 0.31
UBE3A-220ENST00000630424 RRS1Q15050 365 aaKnown RBP16.98■□□□□ 0.31
UBE3A-220ENST00000630424 ZSCAN29Q8IWY8 852 aaPredicted RBP16.98■□□□□ 0.31
UBE3A-220ENST00000630424 NUCB2P80303 420 aa16.98■□□□□ 0.31
UBE3A-220ENST00000630424 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.98■□□□□ 0.319e-7■■■■■ 63.8
UBE3A-220ENST00000630424 TNNT3P45378 269 aaPredicted RBP16.97■□□□□ 0.31
UBE3A-220ENST00000630424 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.97■□□□□ 0.31
UBE3A-220ENST00000630424 ADAMTS2O95450 1211 aa16.96■□□□□ 0.31
UBE3A-220ENST00000630424 AAMPQ13685 434 aa16.96■□□□□ 0.31
UBE3A-220ENST00000630424 CDCA7LQ96GN5 454 aa16.96■□□□□ 0.31
UBE3A-220ENST00000630424 NACAP1Q9BZK3 213 aa16.96■□□□□ 0.31
UBE3A-220ENST00000630424 CASKIN1Q8WXD9 1431 aa16.96■□□□□ 0.31
UBE3A-220ENST00000630424 LRRC9Q6ZRR7 1453 aa16.96■□□□□ 0.3
UBE3A-220ENST00000630424 WWC2Q6AWC2 1192 aa16.96■□□□□ 0.3
UBE3A-220ENST00000630424 CDK5RAP3Q96JB5 506 aa16.96■□□□□ 0.3
UBE3A-220ENST00000630424 CCDC85AQ96PX6 553 aaPredicted RBP16.95■□□□□ 0.3
UBE3A-220ENST00000630424 PTCD1O75127 700 aaKnown RBP16.95■□□□□ 0.3
UBE3A-220ENST00000630424 HFM1A2PYH4 1435 aa16.94■□□□□ 0.3
UBE3A-220ENST00000630424 HIP1O00291 1037 aa16.94■□□□□ 0.3
UBE3A-220ENST00000630424 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.94■□□□□ 0.3
UBE3A-220ENST00000630424 NEK4P51957 841 aa16.94■□□□□ 0.3
UBE3A-220ENST00000630424 CCDC61Q9Y6R9 512 aa16.94■□□□□ 0.3
UBE3A-220ENST00000630424 NESP48681 1621 aa16.94■□□□□ 0.3
UBE3A-220ENST00000630424 KRT18P05783 430 aaKnown RBP16.94■□□□□ 0.3
UBE3A-220ENST00000630424 CEP126Q9P2H0 1117 aa16.94■□□□□ 0.3
UBE3A-220ENST00000630424 C9orf84Q5VXU9 1444 aa16.93■□□□□ 0.3
UBE3A-220ENST00000630424 FKBP4Q02790 459 aaKnown RBP eCLIP16.93■□□□□ 0.3
UBE3A-220ENST00000630424 BTBD11A6QL63 1104 aa16.93■□□□□ 0.3
UBE3A-220ENST00000630424 OLFM4Q6UX06 510 aa16.93■□□□□ 0.3
UBE3A-220ENST00000630424 CFTRP13569 1480 aa16.92■□□□□ 0.3
UBE3A-220ENST00000630424 BRD4O60885 1362 aaPredicted RBP16.92■□□□□ 0.3
UBE3A-220ENST00000630424 CCT4P50991 539 aaKnown RBP16.92■□□□□ 0.3
UBE3A-220ENST00000630424 NUDT16Q96DE0 195 aaKnown RBP16.91■□□□□ 0.3
UBE3A-220ENST00000630424 NOB1Q9ULX3 412 aaKnown RBP16.91■□□□□ 0.3
UBE3A-220ENST00000630424 GPS2Q13227 327 aa16.91■□□□□ 0.3
UBE3A-220ENST00000630424 TXLNAP40222 546 aa16.91■□□□□ 0.3
UBE3A-220ENST00000630424 NGLY1Q96IV0 654 aa16.91■□□□□ 0.3
UBE3A-220ENST00000630424 STARD3NLO95772 234 aa16.91■□□□□ 0.3
UBE3A-220ENST00000630424 MRC2Q9UBG0 1479 aa16.9■□□□□ 0.3
UBE3A-220ENST00000630424 RAI14Q9P0K7 980 aa16.9■□□□□ 0.3
UBE3A-220ENST00000630424 PLEKHH2Q8IVE3 1493 aa16.9■□□□□ 0.3
UBE3A-220ENST00000630424 FOXO3O43524 673 aa16.9■□□□□ 0.3
UBE3A-220ENST00000630424 KCNH5Q8NCM2 988 aa16.89■□□□□ 0.29
UBE3A-220ENST00000630424 SRGAP3O43295 1099 aa16.89■□□□□ 0.29
UBE3A-220ENST00000630424 PDILTQ8N807 584 aa16.89■□□□□ 0.29
UBE3A-220ENST00000630424 PDCP20941 246 aa16.88■□□□□ 0.29
UBE3A-220ENST00000630424 NUP133Q8WUM0 1156 aa16.88■□□□□ 0.29
UBE3A-220ENST00000630424 IFT140Q96RY7 1462 aa16.88■□□□□ 0.29
UBE3A-220ENST00000630424 RPGRIP1LQ68CZ1 1315 aa16.88■□□□□ 0.29
UBE3A-220ENST00000630424 IGHMBP2P38935 993 aaKnown RBP16.88■□□□□ 0.29
UBE3A-220ENST00000630424 TRIM22Q8IYM9 498 aa16.88■□□□□ 0.29
UBE3A-220ENST00000630424 FMNL2Q96PY5 1086 aa16.88■□□□□ 0.29
UBE3A-220ENST00000630424 TMOD2Q9NZR1 351 aa16.88■□□□□ 0.29
UBE3A-220ENST00000630424 HMGB2P26583 209 aaKnown RBP16.88■□□□□ 0.29
UBE3A-220ENST00000630424 WAPLQ7Z5K2 1190 aa16.88■□□□□ 0.29
UBE3A-220ENST00000630424 ZHX3Q9H4I2 956 aa16.88■□□□□ 0.29
UBE3A-220ENST00000630424 LRP2BPQ9P2M1 347 aa16.88■□□□□ 0.29
UBE3A-220ENST00000630424 LRRCC1Q9C099 1032 aa16.87■□□□□ 0.29
UBE3A-220ENST00000630424 ABCF2Q9UG63 623 aa16.87■□□□□ 0.29
UBE3A-220ENST00000630424 ERBINQ96RT1 1412 aa16.87■□□□□ 0.29
UBE3A-220ENST00000630424 NAT10Q9H0A0 1025 aaKnown RBP16.87■□□□□ 0.29
UBE3A-220ENST00000630424 SPINK5Q9NQ38 1064 aaPredicted RBP16.87■□□□□ 0.29
UBE3A-220ENST00000630424 KINO60870 393 aaKnown RBP16.87■□□□□ 0.29
UBE3A-220ENST00000630424 SOGA3Q5TF21 947 aa16.87■□□□□ 0.29
UBE3A-220ENST00000630424 ATAD2Q6PL18 1390 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms