RNA–Protein interactions for RNA: ENST00000629219.1

PKP4-218, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-218ENST00000629219 PMFBP1Q8TBY8 1022 aa13□□□□□ -0.33
PKP4-218ENST00000629219 TONSLQ96HA7 1378 aa12.99□□□□□ -0.33
PKP4-218ENST00000629219 CLSPNQ9HAW4 1339 aa12.98□□□□□ -0.33
PKP4-218ENST00000629219 NEUROD1Q13562 356 aa12.98□□□□□ -0.33
PKP4-218ENST00000629219 NGDNQ8NEJ9 315 aaKnown RBP12.98□□□□□ -0.33
PKP4-218ENST00000629219 COL14A1Q05707 1796 aaKnown RBP12.98□□□□□ -0.33
PKP4-218ENST00000629219 NRAPQ86VF7 1730 aa12.97□□□□□ -0.33
PKP4-218ENST00000629219 PHRF1Q9P1Y6 1649 aaKnown RBP12.97□□□□□ -0.33
PKP4-218ENST00000629219 EVC2Q86UK5 1308 aa12.96□□□□□ -0.33
PKP4-218ENST00000629219 UNC5CLQ8IV45 518 aa12.96□□□□□ -0.33
PKP4-218ENST00000629219 GJD4Q96KN9 370 aaPredicted RBP12.96□□□□□ -0.33
PKP4-218ENST00000629219 PPIP5K1Q6PFW1 1433 aa12.96□□□□□ -0.34
PKP4-218ENST00000629219 ACEP12821 1306 aa12.95□□□□□ -0.34
PKP4-218ENST00000629219 NBPF8Q3BBV2 869 aa12.95□□□□□ -0.34
PKP4-218ENST00000629219 GLI3P10071 1580 aa12.94□□□□□ -0.34
PKP4-218ENST00000629219 AKAP12Q02952 1782 aa12.94□□□□□ -0.34
PKP4-218ENST00000629219 SLC24A1O60721 1099 aa12.93□□□□□ -0.34
PKP4-218ENST00000629219 HAP1P54257 671 aaPredicted RBP12.93□□□□□ -0.34
PKP4-218ENST00000629219 SRPK2P78362 688 aaKnown RBP12.93□□□□□ -0.34
PKP4-218ENST00000629219 VPS72Q15906 364 aa12.93□□□□□ -0.34
PKP4-218ENST00000629219 DEFB132Q7Z7B7 95 aa12.93□□□□□ -0.34
PKP4-218ENST00000629219 CCDC125Q86Z20 511 aa12.93□□□□□ -0.34
PKP4-218ENST00000629219 TIMELESSQ9UNS1 1208 aa12.93□□□□□ -0.34
PKP4-218ENST00000629219 USP6P35125 1406 aa12.92□□□□□ -0.34
PKP4-218ENST00000629219 SSH2Q76I76 1423 aa12.92□□□□□ -0.34
PKP4-218ENST00000629219 NRKQ7Z2Y5 1582 aa12.92□□□□□ -0.34
PKP4-218ENST00000629219 PUS7Q96PZ0 661 aaKnown RBP12.92□□□□□ -0.34
PKP4-218ENST00000629219 CPDO75976 1380 aa12.92□□□□□ -0.34
PKP4-218ENST00000629219 USP19O94966 1318 aa12.91□□□□□ -0.34
PKP4-218ENST00000629219 LMOD2Q6P5Q4 547 aa12.91□□□□□ -0.34
PKP4-218ENST00000629219 CABLES1Q8TDN4 633 aa12.91□□□□□ -0.34
PKP4-218ENST00000629219 CARD11Q9BXL7 1154 aa12.91□□□□□ -0.34
PKP4-218ENST00000629219 MON2Q7Z3U7 1717 aa12.91□□□□□ -0.34
PKP4-218ENST00000629219 ONECUT3O60422 494 aaPredicted RBP12.9□□□□□ -0.34
PKP4-218ENST00000629219 ZNF692Q9BU19 519 aaPredicted RBP12.9□□□□□ -0.34
PKP4-218ENST00000629219 CABP2Q9NPB3 220 aa12.9□□□□□ -0.34
PKP4-218ENST00000629219 USP54Q70EL1 1684 aa12.89□□□□□ -0.35
PKP4-218ENST00000629219 CPSF1Q10570 1443 aaKnown RBP12.89□□□□□ -0.35
PKP4-218ENST00000629219 SLIT3O75094 1523 aa12.89□□□□□ -0.35
PKP4-218ENST00000629219 FAM83GA6ND36 823 aa12.89□□□□□ -0.35
PKP4-218ENST00000629219 PAK3O75914 559 aaPredicted RBP12.89□□□□□ -0.35
PKP4-218ENST00000629219 LMO7Q8WWI1 1683 aa12.89□□□□□ -0.35
PKP4-218ENST00000629219 BRWD3Q6RI45 1802 aa12.88□□□□□ -0.35
PKP4-218ENST00000629219 PLEKHG5O94827 1062 aa12.88□□□□□ -0.35
PKP4-218ENST00000629219 NINLQ9Y2I6 1382 aa12.88□□□□□ -0.35
PKP4-218ENST00000629219 PIK3C2AO00443 1686 aa12.88□□□□□ -0.35
PKP4-218ENST00000629219 BLMP54132 1417 aaPredicted RBP12.88□□□□□ -0.35
PKP4-218ENST00000629219 NLRP13Q86W25 1043 aa12.87□□□□□ -0.35
PKP4-218ENST00000629219 SEPT12Q8IYM1 358 aa12.87□□□□□ -0.35
PKP4-218ENST00000629219 CABP1Q9NZU7 370 aa12.87□□□□□ -0.35
PKP4-218ENST00000629219 TTC21AQ8NDW8 1320 aa12.87□□□□□ -0.35
PKP4-218ENST00000629219 KIAA0232Q92628 1395 aa12.86□□□□□ -0.35
PKP4-218ENST00000629219 ABTB2Q8N961 1025 aa12.86□□□□□ -0.35
PKP4-218ENST00000629219 PRDM11Q9NQV5 511 aa12.86□□□□□ -0.35
PKP4-218ENST00000629219 ABCC6O95255 1503 aa12.86□□□□□ -0.35
PKP4-218ENST00000629219 THSD7AQ9UPZ6 1657 aa12.86□□□□□ -0.35
PKP4-218ENST00000629219 BTG4Q9NY30 223 aa12.85□□□□□ -0.35
PKP4-218ENST00000629219 PSDA5PKW4 1024 aaPredicted RBP12.84□□□□□ -0.35
PKP4-218ENST00000629219 SPATA31A5Q5VU36 1347 aa12.84□□□□□ -0.35
PKP4-218ENST00000629219 SPATA31A7Q8IWB4 1347 aa12.84□□□□□ -0.35
PKP4-218ENST00000629219 CD163L1Q9NR16 1453 aa12.84□□□□□ -0.35
PKP4-218ENST00000629219 TESK2Q96S53 571 aa12.83□□□□□ -0.36
PKP4-218ENST00000629219 USP31Q70CQ4 1352 aa12.82□□□□□ -0.36
PKP4-218ENST00000629219 COL18A1P39060 1754 aa12.82□□□□□ -0.36
PKP4-218ENST00000629219 GCP02774 474 aa12.82□□□□□ -0.36
PKP4-218ENST00000629219 TTC21BQ7Z4L5 1316 aa12.82□□□□□ -0.36
PKP4-218ENST00000629219 AATKQ6ZMQ8 1374 aa12.81□□□□□ -0.36
PKP4-218ENST00000629219 EDC4Q6P2E9 1401 aaKnown RBP12.81□□□□□ -0.36
PKP4-218ENST00000629219 CAMTA1Q9Y6Y1 1673 aa12.81□□□□□ -0.36
PKP4-218ENST00000629219 SF3B2Q13435 895 aaKnown RBP12.81□□□□□ -0.36
PKP4-218ENST00000629219 KRT27Q7Z3Y8 459 aa12.81□□□□□ -0.36
PKP4-218ENST00000629219 CCDC9Q9Y3X0 531 aaKnown RBP12.81□□□□□ -0.36
PKP4-218ENST00000629219 KTN1Q86UP2 1357 aaKnown RBP12.81□□□□□ -0.36
PKP4-218ENST00000629219 NFAT5O94916 1531 aa12.8□□□□□ -0.36
PKP4-218ENST00000629219 FAM182BQ5T319 152 aa12.8□□□□□ -0.36
PKP4-218ENST00000629219 KCNH5Q8NCM2 988 aa12.8□□□□□ -0.36
PKP4-218ENST00000629219 SPATA31A1Q5TZJ5 1347 aa12.8□□□□□ -0.36
PKP4-218ENST00000629219 USP47Q96K76 1375 aa12.8□□□□□ -0.36
PKP4-218ENST00000629219 COL5A2P05997 1499 aaPredicted RBP12.79□□□□□ -0.36
PKP4-218ENST00000629219 NLRP6P59044 892 aa12.79□□□□□ -0.36
PKP4-218ENST00000629219 BARGINQ6ZT62 677 aa12.79□□□□□ -0.36
PKP4-218ENST00000629219 THRAP3Q9Y2W1 955 aaKnown RBP12.79□□□□□ -0.36
PKP4-218ENST00000629219 LRP5O75197 1615 aa12.78□□□□□ -0.36
PKP4-218ENST00000629219 ST20-MTHFSA0A0A6YYL1 179 aa12.78□□□□□ -0.36
PKP4-218ENST00000629219 ZC3H6P61129 1189 aaKnown RBP12.78□□□□□ -0.36
PKP4-218ENST00000629219 NUTM2GQ5VZR2 741 aa12.78□□□□□ -0.36
PKP4-218ENST00000629219 HDGFL2Q7Z4V5 671 aaPredicted RBP12.78□□□□□ -0.36
PKP4-218ENST00000629219 TERF2IPQ9NYB0 399 aa12.78□□□□□ -0.36
PKP4-218ENST00000629219 PARP4Q9UKK3 1724 aaKnown RBP12.78□□□□□ -0.36
PKP4-218ENST00000629219 EN1Q05925 392 aaPredicted RBP12.77□□□□□ -0.37
PKP4-218ENST00000629219 FAM98CQ17RN3 349 aaKnown RBP12.77□□□□□ -0.37
PKP4-218ENST00000629219 RGPD1P0DJD0 1748 aa12.76□□□□□ -0.37
PKP4-218ENST00000629219 WNK3Q9BYP7 1800 aa12.76□□□□□ -0.37
PKP4-218ENST00000629219 CHRNA2Q15822 529 aa12.76□□□□□ -0.37
PKP4-218ENST00000629219 CDCA8Q53HL2 280 aa12.76□□□□□ -0.37
PKP4-218ENST00000629219 A0A1W2PP64 1363 aa12.76□□□□□ -0.37
PKP4-218ENST00000629219 ANKRD36BQ8N2N9 1353 aa12.76□□□□□ -0.37
PKP4-218ENST00000629219 CRB1P82279 1406 aa12.76□□□□□ -0.37
PKP4-218ENST00000629219 A0A0G2JS52 829 aa12.75□□□□□ -0.37
PKP4-218ENST00000629219 OVOS2A0A0J9YW53 1432 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms